RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
THUMPD2-203ENST00000460072 A1BGP04217 495 aa9.39□□□□□ -0.91
THUMPD2-203ENST00000460072 PARP10Q53GL7 1025 aa9.39□□□□□ -0.91
THUMPD2-203ENST00000460072 UTRNP46939 3433 aa9.39□□□□□ -0.91
THUMPD2-203ENST00000460072 DDNO94850 711 aaPredicted RBP9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 SUPT20HQ8NEM7 779 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 TLL2Q9Y6L7 1015 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 CACNA1FO60840 1977 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 MAP2K2P36507 400 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 ECE1P42892 770 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 VEGFBP49765 207 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 TAF7Q15545 349 aaPredicted RBP9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 LRP10Q7Z4F1 713 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 PRKAR2BP31323 418 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 MIER1Q8N108 512 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 SYNE4Q8N205 404 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 TBC1D2BQ9UPU7 963 aa9.38□□□□□ -0.91
THUMPD2-203ENST00000460072 NTSR2O95665 410 aa9.37□□□□□ -0.91
THUMPD2-203ENST00000460072 PLEKHF1Q96S99 279 aa9.37□□□□□ -0.91
THUMPD2-203ENST00000460072 PCDH10Q9P2E7 1040 aa9.37□□□□□ -0.91
THUMPD2-203ENST00000460072 USP16Q9Y5T5 823 aa9.37□□□□□ -0.91
THUMPD2-203ENST00000460072 WDR33Q9C0J8 1336 aaKnown RBP9.37□□□□□ -0.91
THUMPD2-203ENST00000460072 NECTIN2Q92692 538 aa9.37□□□□□ -0.91
THUMPD2-203ENST00000460072 PHACTR3Q96KR7 559 aa9.37□□□□□ -0.91
THUMPD2-203ENST00000460072 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 YTHDC1Q96MU7 727 aaKnown RBP9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 PNNQ9H307 717 aaKnown RBP9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 SAGE1Q9NXZ1 904 aa9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 DDX21Q9NR30 783 aaKnown RBP eCLIP9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 KCNQ3O43525 872 aa9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 NIP7Q9Y221 180 aaKnown RBP eCLIP9.36□□□□□ -0.91
THUMPD2-203ENST00000460072 SCNN1DP51172 638 aa9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 BRPF1P55201 1214 aaPredicted RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 EIF6P56537 245 aaKnown RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 DEFB115Q30KQ5 88 aa9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 UBN2Q6ZU65 1347 aa9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 POTEJP0CG39 1038 aa9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 CNTROBQ8N137 903 aa9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 ADARB2Q9NS39 739 aaKnown RBP9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 ATP6V0A2Q9Y487 856 aa9.35□□□□□ -0.91
THUMPD2-203ENST00000460072 HOXB7P09629 217 aa9.34□□□□□ -0.91
THUMPD2-203ENST00000460072 BICDL1Q6ZP65 573 aa9.34□□□□□ -0.91
THUMPD2-203ENST00000460072 PPEF1O14829 653 aaPredicted RBP9.34□□□□□ -0.91
THUMPD2-203ENST00000460072 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
THUMPD2-203ENST00000460072 COL1A1P02452 1464 aaPredicted RBP9.34□□□□□ -0.91
THUMPD2-203ENST00000460072 CEP350Q5VT06 3117 aa9.34□□□□□ -0.92
THUMPD2-203ENST00000460072 NFE2L2Q16236 605 aa9.34□□□□□ -0.92
THUMPD2-203ENST00000460072 KIF6Q6ZMV9 814 aa9.34□□□□□ -0.92
THUMPD2-203ENST00000460072 PPP1R42Q7Z4L9 355 aa9.34□□□□□ -0.92
THUMPD2-203ENST00000460072 SP8Q8IXZ3 490 aa9.34□□□□□ -0.92
THUMPD2-203ENST00000460072 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 ZNF277Q9NRM2 450 aaPredicted RBP9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 GPRC5DQ9NZD1 345 aa9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 MKRN1Q9UHC7 482 aaKnown RBP9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 MMP14P50281 582 aa9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 HLFQ16534 295 aa9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 JDP2Q8WYK2 163 aa9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 POLR3GLQ9BT43 218 aa9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 SCN9AQ15858 1988 aa9.33□□□□□ -0.92
THUMPD2-203ENST00000460072 U2SURPO15042 1029 aaKnown RBP9.32□□□□□ -0.92
THUMPD2-203ENST00000460072 BBOX1O75936 387 aa9.32□□□□□ -0.92
THUMPD2-203ENST00000460072 CC2D1BQ5T0F9 858 aaKnown RBP9.32□□□□□ -0.92
THUMPD2-203ENST00000460072 ABHD8Q96I13 439 aa9.32□□□□□ -0.92
THUMPD2-203ENST00000460072 SPEF2Q9C093 1822 aa9.32□□□□□ -0.92
THUMPD2-203ENST00000460072 RPS12P25398 132 aaKnown RBP9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 KIAA2012Q0VF49 1180 aa9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 NOM1Q5C9Z4 860 aaKnown RBP9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 NIM1KQ8IY84 436 aa9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 DPF2Q92785 391 aa9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 ZNRF3Q9ULT6 936 aa9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 PDIA6Q15084 440 aa9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 RPGRQ92834 1020 aaKnown RBP9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 PRAMEF22A3QJZ6 481 aa9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 CAPNS2Q96L46 248 aa9.31□□□□□ -0.92
THUMPD2-203ENST00000460072 ABCC4O15439 1325 aa9.3□□□□□ -0.92
THUMPD2-203ENST00000460072 LMOD3Q0VAK6 560 aa9.3□□□□□ -0.92
THUMPD2-203ENST00000460072 TNIP1Q15025 636 aa9.3□□□□□ -0.92
THUMPD2-203ENST00000460072 SUSD4Q5VX71 490 aa9.3□□□□□ -0.92
THUMPD2-203ENST00000460072 CST9Q5W186 159 aa9.3□□□□□ -0.92
THUMPD2-203ENST00000460072 MCM10Q7L590 875 aa9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 LBX1P52954 281 aa9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 TRIM28Q13263 835 aaKnown RBP9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 GRAPQ13588 217 aa9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 GRAPLQ8TC17 118 aaPredicted RBP9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 POLR2AP24928 1970 aaKnown RBP9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 PITPNM2Q9BZ72 1349 aa9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 RTL9Q8NET4 1388 aa9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 SF3B3Q15393 1217 aaKnown RBP9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 SAPCD2Q86UD0 394 aa9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 UTP14AQ9BVJ6 771 aaKnown RBP9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 CFHR5Q9BXR6 569 aa9.29□□□□□ -0.92
THUMPD2-203ENST00000460072 NPHP1O15259 732 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms