RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
CDKN3-205ENST00000458126 LMTK2Q8IWU2 1503 aa8.37□□□□□ -1.07
CDKN3-205ENST00000458126 BAHCC1Q9P281 2608 aa8.37□□□□□ -1.07
CDKN3-205ENST00000458126 PEAK1Q9H792 1746 aa8.37□□□□□ -1.07
CDKN3-205ENST00000458126 LRPPRCP42704 1394 aaKnown RBP8.36□□□□□ -1.07
CDKN3-205ENST00000458126 PHRF1Q9P1Y6 1649 aaKnown RBP8.36□□□□□ -1.07
CDKN3-205ENST00000458126 MKI67P46013 3256 aaKnown RBP8.36□□□□□ -1.07
CDKN3-205ENST00000458126 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 LRRIQ1Q96JM4 1722 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 MUC3AQ02505 3323 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 OVOS2A0A0G2JMS6 1433 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 OVOS2A0A0J9YW53 1432 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 HFM1A2PYH4 1435 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 OVOS2Q6IE36 1432 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 SBF2Q86WG5 1849 aa8.36□□□□□ -1.07
CDKN3-205ENST00000458126 QPCTQ16769 361 aa8.35□□□□□ -1.07
CDKN3-205ENST00000458126 CSPP1Q1MSJ5 1256 aa8.35□□□□□ -1.07
CDKN3-205ENST00000458126 TREML4Q6UXN2 200 aa8.35□□□□□ -1.07
CDKN3-205ENST00000458126 TRIM47Q96LD4 638 aa8.35□□□□□ -1.07
CDKN3-205ENST00000458126 NRXN3Q9Y4C0 1643 aa8.35□□□□□ -1.07
CDKN3-205ENST00000458126 COL14A1Q05707 1796 aaKnown RBP8.35□□□□□ -1.07
CDKN3-205ENST00000458126 CEP152O94986 1710 aa8.34□□□□□ -1.07
CDKN3-205ENST00000458126 IGSF1Q8N6C5 1336 aa8.34□□□□□ -1.07
CDKN3-205ENST00000458126 CLK2P49760 499 aaKnown RBP8.34□□□□□ -1.07
CDKN3-205ENST00000458126 ZNF827Q17R98 1081 aa8.34□□□□□ -1.07
CDKN3-205ENST00000458126 FAM174AQ8TBP5 190 aa8.34□□□□□ -1.07
CDKN3-205ENST00000458126 RIMS2Q9UQ26 1411 aa8.34□□□□□ -1.07
CDKN3-205ENST00000458126 TTC28Q96AY4 2481 aa8.34□□□□□ -1.08
CDKN3-205ENST00000458126 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
CDKN3-205ENST00000458126 TECPR2O15040 1411 aa8.33□□□□□ -1.08
CDKN3-205ENST00000458126 QSER1Q2KHR3 1735 aa8.33□□□□□ -1.08
CDKN3-205ENST00000458126 ARMC2Q8NEN0 867 aa8.33□□□□□ -1.08
CDKN3-205ENST00000458126 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
CDKN3-205ENST00000458126 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
CDKN3-205ENST00000458126 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
CDKN3-205ENST00000458126 HELBQ8NG08 1087 aaPredicted RBP8.32□□□□□ -1.08
CDKN3-205ENST00000458126 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
CDKN3-205ENST00000458126 ESCO1Q5FWF5 840 aa8.31□□□□□ -1.08
CDKN3-205ENST00000458126 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
CDKN3-205ENST00000458126 CDK15Q96Q40 435 aa8.31□□□□□ -1.08
CDKN3-205ENST00000458126 CASP8AP2Q9UKL3 1982 aa8.31□□□□□ -1.08
CDKN3-205ENST00000458126 LTBP1Q14766 1721 aa8.31□□□□□ -1.08
CDKN3-205ENST00000458126 RANBP2P49792 3224 aaKnown RBP8.31□□□□□ -1.08
CDKN3-205ENST00000458126 THSD7BQ9C0I4 1608 aa8.3□□□□□ -1.08
CDKN3-205ENST00000458126 PKD1L3Q7Z443 1732 aa8.3□□□□□ -1.08
CDKN3-205ENST00000458126 SNRPBP14678 240 aaKnown RBP8.3□□□□□ -1.08
CDKN3-205ENST00000458126 BPHLQ86WA6 291 aaPredicted RBP8.3□□□□□ -1.08
CDKN3-205ENST00000458126 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
CDKN3-205ENST00000458126 CHD8Q9HCK8 2581 aa8.3□□□□□ -1.08
CDKN3-205ENST00000458126 MBD5Q9P267 1494 aa8.3□□□□□ -1.08
CDKN3-205ENST00000458126 PNPLA7Q6ZV29 1317 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 VEGFAP15692 232 aaPredicted RBP8.29□□□□□ -1.08
CDKN3-205ENST00000458126 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
CDKN3-205ENST00000458126 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 C9orf131Q5VYM1 1079 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 TSC1Q92574 1164 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 FOXJ1Q92949 421 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 DDRGK1Q96HY6 314 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 ATP7BP35670 1465 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 PRXQ9BXM0 1461 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 TNS3Q68CZ2 1445 aa8.29□□□□□ -1.08
CDKN3-205ENST00000458126 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
CDKN3-205ENST00000458126 BRD4O60885 1362 aaPredicted RBP8.28□□□□□ -1.08
CDKN3-205ENST00000458126 WFS1O76024 890 aa8.28□□□□□ -1.08
CDKN3-205ENST00000458126 ADH1CP00326 375 aa8.28□□□□□ -1.08
CDKN3-205ENST00000458126 NNTQ13423 1086 aa8.28□□□□□ -1.08
CDKN3-205ENST00000458126 SH3D19Q5HYK7 790 aa8.28□□□□□ -1.08
CDKN3-205ENST00000458126 KDM4CQ9H3R0 1056 aa8.28□□□□□ -1.08
CDKN3-205ENST00000458126 FMN2Q9NZ56 1722 aa8.28□□□□□ -1.08
CDKN3-205ENST00000458126 CCDC144AA2RUR9 1427 aa8.28□□□□□ -1.08
CDKN3-205ENST00000458126 RASSF10A6NK89 507 aa8.27□□□□□ -1.09
CDKN3-205ENST00000458126 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDKN3-205ENST00000458126 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDKN3-205ENST00000458126 GPKOWQ92917 476 aaPredicted RBP eCLIP8.27□□□□□ -1.09
CDKN3-205ENST00000458126 ARHGEF5Q12774 1597 aa8.27□□□□□ -1.09
CDKN3-205ENST00000458126 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
CDKN3-205ENST00000458126 NR5A1Q13285 461 aa8.26□□□□□ -1.09
CDKN3-205ENST00000458126 AGERQ15109 404 aa8.26□□□□□ -1.09
CDKN3-205ENST00000458126 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
CDKN3-205ENST00000458126 TRIM46Q7Z4K8 759 aa8.26□□□□□ -1.09
CDKN3-205ENST00000458126 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
CDKN3-205ENST00000458126 BCL9O00512 1426 aa8.26□□□□□ -1.09
CDKN3-205ENST00000458126 BRCA2P51587 3418 aa8.26□□□□□ -1.09
CDKN3-205ENST00000458126 SH3RF1Q7Z6J0 888 aa8.25□□□□□ -1.09
CDKN3-205ENST00000458126 C1QTNF2Q9BXJ5 285 aa8.25□□□□□ -1.09
CDKN3-205ENST00000458126 PARP4Q9UKK3 1724 aaKnown RBP8.25□□□□□ -1.09
CDKN3-205ENST00000458126 PASKQ96RG2 1323 aa8.25□□□□□ -1.09
CDKN3-205ENST00000458126 LAMB4A4D0S4 1761 aa8.25□□□□□ -1.09
CDKN3-205ENST00000458126 TMEM88BA6NKF7 163 aa8.24□□□□□ -1.09
CDKN3-205ENST00000458126 TERTO14746 1132 aaKnown RBP8.24□□□□□ -1.09
CDKN3-205ENST00000458126 CA12O43570 354 aa8.24□□□□□ -1.09
CDKN3-205ENST00000458126 TIMP2P16035 220 aa8.24□□□□□ -1.09
CDKN3-205ENST00000458126 WDR4P57081 412 aaKnown RBP8.24□□□□□ -1.09
CDKN3-205ENST00000458126 DEFB115Q30KQ5 88 aa8.24□□□□□ -1.09
CDKN3-205ENST00000458126 PPP2R2DQ66LE6 453 aa8.24□□□□□ -1.09
CDKN3-205ENST00000458126 SH3BP5LQ7L8J4 393 aa8.24□□□□□ -1.09
CDKN3-205ENST00000458126 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDKN3-205ENST00000458126 FAM117AQ9C073 453 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms