RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TPM3P06753 285 aa16■□□□□ 0.15
SYNGAP1-204ENST00000449372 PWP2Q15269 919 aaKnown RBP16■□□□□ 0.15
SYNGAP1-204ENST00000449372 HSPA2P54652 639 aa16■□□□□ 0.15
SYNGAP1-204ENST00000449372 PLEKHO1Q53GL0 409 aaPredicted RBP16■□□□□ 0.15
SYNGAP1-204ENST00000449372 SRCIN1Q9C0H9 1055 aa16■□□□□ 0.15
SYNGAP1-204ENST00000449372 RNMTO43148 476 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 EPB41L2O43491 1005 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 KDM4AO75164 1064 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 ANAPC15P60006 121 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 CADPS2Q86UW7 1296 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 KDM4FA0A1W2PPD8 638 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 C5P01031 1676 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 CPDO75976 1380 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 KCNQ3O43525 872 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 CYP2C19P33261 490 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 CCDC112Q8NEF3 446 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 STK31Q9BXU1 1019 aa15.99■□□□□ 0.15
SYNGAP1-204ENST00000449372 MRC1P22897 1456 aa15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 NOL10Q9BSC4 688 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 ST7Q9NRC1 585 aa15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 ZNF530Q6P9A1 599 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 SPC24Q8NBT2 197 aa15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 ZNF397Q8NF99 534 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 PARP4Q9UKK3 1724 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 MEGF6O75095 1541 aa15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 GTF2A1P52655 376 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 C16orf45Q96MC5 204 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-204ENST00000449372 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 RASSF4Q9H2L5 321 aa15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 GNAI3P08754 354 aa15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 GLI3P10071 1580 aa15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 GOLGA6L6A8MZA4 724 aa15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 INTS4Q96HW7 963 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 TMX1Q9H3N1 280 aa15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 KDM6AO15550 1401 aaPredicted RBP15.97■□□□□ 0.15
SYNGAP1-204ENST00000449372 GSPT1P15170 499 aaKnown RBP15.96■□□□□ 0.15
SYNGAP1-204ENST00000449372 HOMEZQ8IX15 550 aa15.96■□□□□ 0.15
SYNGAP1-204ENST00000449372 PATL2C9JE40 543 aaKnown RBP15.96■□□□□ 0.15
SYNGAP1-204ENST00000449372 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
SYNGAP1-204ENST00000449372 WDR33Q9C0J8 1336 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 PHAXQ9H814 394 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 TNNT1P13805 278 aa15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 NOP2P46087 812 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 FAM53CQ9NYF3 392 aa15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 PAXBP1Q9Y5B6 917 aa15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 ZC3H6P61129 1189 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
SYNGAP1-204ENST00000449372 DHX16O60231 1041 aaKnown RBP15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 NEK4P51957 841 aa15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 AXDND1Q5T1B0 1012 aaPredicted RBP15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 BRINP3Q76B58 766 aa15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 NHSL1Q5SYE7 1610 aa15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 SDSP20132 328 aa15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 FOXD4L6Q3SYB3 417 aaPredicted RBP15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 FOXD4L3Q6VB84 417 aaPredicted RBP15.94■□□□□ 0.14
SYNGAP1-204ENST00000449372 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 GADD45BO75293 160 aaPredicted RBP15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 USP44Q9H0E7 712 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 SHANK3Q9BYB0 1731 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 SALL3Q9BXA9 1300 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 GNAI2P04899 355 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 SLC4A10Q6U841 1118 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 GDPD2Q9HCC8 539 aa15.93■□□□□ 0.14
SYNGAP1-204ENST00000449372 KCNG1Q9UIX4 513 aa15.92■□□□□ 0.14
SYNGAP1-204ENST00000449372 ADCY9O60503 1353 aa15.92■□□□□ 0.14
SYNGAP1-204ENST00000449372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.14
SYNGAP1-204ENST00000449372 GIGYF1O75420 1035 aaPredicted RBP15.92■□□□□ 0.14
SYNGAP1-204ENST00000449372 CTR9Q6PD62 1173 aa15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 OTUD7AQ8TE49 926 aaPredicted RBP15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 SOS2Q07890 1332 aaPredicted RBP15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 CCDC183Q5T5S1 534 aa15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 OSBPL3Q9H4L5 887 aa15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 TPRNQ4KMQ1 711 aa15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 KIF1BPQ96EK5 621 aa15.91■□□□□ 0.14
SYNGAP1-204ENST00000449372 BRD1O95696 1058 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 C1orf141Q5JVX7 400 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 C10orf67Q8IYJ2 551 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 ZNF592Q92610 1267 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 V9GYY5 206 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 APBB1O00213 710 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 PTGS1P23219 599 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 ATP8B2P98198 1209 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 TEFQ10587 303 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 FBXO38Q6PIJ6 1188 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 MYCBPQ99417 103 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 LRRCC1Q9C099 1032 aa15.9■□□□□ 0.14
SYNGAP1-204ENST00000449372 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms