RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
TRIM4-204ENST00000447480 SULT6B1Q6IMI4 303 aa9.34□□□□□ -0.91
TRIM4-204ENST00000447480 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
TRIM4-204ENST00000447480 GCC1Q96CN9 775 aa9.34□□□□□ -0.91
TRIM4-204ENST00000447480 EYA1Q99502 592 aa9.34□□□□□ -0.91
TRIM4-204ENST00000447480 PKD1L3Q7Z443 1732 aa9.34□□□□□ -0.92
TRIM4-204ENST00000447480 RGPD2P0DJD1 1756 aa9.33□□□□□ -0.92
TRIM4-204ENST00000447480 DYNC1I1O14576 645 aa9.33□□□□□ -0.92
TRIM4-204ENST00000447480 HTATSF1O43719 755 aaKnown RBP9.33□□□□□ -0.92
TRIM4-204ENST00000447480 ONECUT3O60422 494 aaPredicted RBP9.33□□□□□ -0.92
TRIM4-204ENST00000447480 MSNP26038 577 aaKnown RBP9.33□□□□□ -0.92
TRIM4-204ENST00000447480 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
TRIM4-204ENST00000447480 SKAP1Q86WV1 359 aa9.33□□□□□ -0.92
TRIM4-204ENST00000447480 PANK1Q8TE04 598 aa9.33□□□□□ -0.92
TRIM4-204ENST00000447480 RTF1Q92541 710 aaKnown RBP9.33□□□□□ -0.92
TRIM4-204ENST00000447480 ARHGAP45Q92619 1136 aa9.33□□□□□ -0.92
TRIM4-204ENST00000447480 CHMP4AQ9BY43 222 aa9.33□□□□□ -0.92
TRIM4-204ENST00000447480 TNS2Q63HR2 1409 aa9.32□□□□□ -0.92
TRIM4-204ENST00000447480 NBPF6Q5VWK0 638 aa9.32□□□□□ -0.92
TRIM4-204ENST00000447480 IFNL2Q8IZJ0 200 aa9.32□□□□□ -0.92
TRIM4-204ENST00000447480 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
TRIM4-204ENST00000447480 FBXW7Q969H0 707 aa9.32□□□□□ -0.92
TRIM4-204ENST00000447480 NBPF4Q96M43 638 aa9.32□□□□□ -0.92
TRIM4-204ENST00000447480 NOL7Q9UMY1 257 aaKnown RBP9.32□□□□□ -0.92
TRIM4-204ENST00000447480 PTPREP23469 700 aa9.31□□□□□ -0.92
TRIM4-204ENST00000447480 NUCB1Q02818 461 aa9.31□□□□□ -0.92
TRIM4-204ENST00000447480 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
TRIM4-204ENST00000447480 SMAP1Q8IYB5 467 aaPredicted RBP9.31□□□□□ -0.92
TRIM4-204ENST00000447480 TNPO1Q92973 898 aaKnown RBP9.31□□□□□ -0.92
TRIM4-204ENST00000447480 THSD7AQ9UPZ6 1657 aa9.31□□□□□ -0.92
TRIM4-204ENST00000447480 KAT6BQ8WYB5 2073 aa9.31□□□□□ -0.92
TRIM4-204ENST00000447480 GLI3P10071 1580 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
TRIM4-204ENST00000447480 FBLN1P23142 703 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 PRKAR2BP31323 418 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 NASPP49321 788 aaPredicted RBP9.3□□□□□ -0.92
TRIM4-204ENST00000447480 FAM98CQ17RN3 349 aaKnown RBP9.3□□□□□ -0.92
TRIM4-204ENST00000447480 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 PDLIM2Q96JY6 352 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 EPAS1Q99814 870 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 DISP2A7MBM2 1401 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 BCL9O00512 1426 aa9.3□□□□□ -0.92
TRIM4-204ENST00000447480 HMOX1P09601 288 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 RABEP1Q15276 862 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 UTP14CQ5TAP6 766 aaKnown RBP9.29□□□□□ -0.92
TRIM4-204ENST00000447480 ATF7IPQ6VMQ6 1270 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 FAM196AQ6ZSG2 479 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 PANK2Q9BZ23 570 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 ZBTB40Q9NUA8 1239 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 LRRC37A3O60309 1634 aa9.29□□□□□ -0.92
TRIM4-204ENST00000447480 SENP3-EIF4A1A0A087X0R7 540 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 HMGN5P82970 282 aaKnown RBP9.28□□□□□ -0.92
TRIM4-204ENST00000447480 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 NFE2L2Q16236 605 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 ZNF530Q6P9A1 599 aaPredicted RBP9.28□□□□□ -0.92
TRIM4-204ENST00000447480 ADGRD1Q6QNK2 874 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 KIAA1211Q6ZU35 1233 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 KRT27Q7Z3Y8 459 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 CCDC146Q8IYE0 955 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 CCDC39Q9UFE4 941 aa9.28□□□□□ -0.92
TRIM4-204ENST00000447480 MAP3K5Q99683 1374 aa9.27□□□□□ -0.93
TRIM4-204ENST00000447480 ERVV-2B6SEH9 535 aa9.27□□□□□ -0.93
TRIM4-204ENST00000447480 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
TRIM4-204ENST00000447480 SF3B2Q13435 895 aaKnown RBP9.27□□□□□ -0.93
TRIM4-204ENST00000447480 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.93
TRIM4-204ENST00000447480 MEGF6O75095 1541 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 EPB41L2O43491 1005 aaKnown RBP9.26□□□□□ -0.93
TRIM4-204ENST00000447480 MBD3O95983 291 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 RLBP1P12271 317 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 COL9A1P20849 921 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 MLLT3P42568 568 aaPredicted RBP9.26□□□□□ -0.93
TRIM4-204ENST00000447480 MCM2P49736 904 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 MFAP1P55081 439 aaKnown RBP9.26□□□□□ -0.93
TRIM4-204ENST00000447480 TEFQ10587 303 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 UVSSAQ2YD98 709 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 USHBP1Q8N6Y0 703 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 PRIMPOLQ96LW4 560 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 DLG5Q8TDM6 1919 aa9.26□□□□□ -0.93
TRIM4-204ENST00000447480 TK2O00142 265 aa9.25□□□□□ -0.93
TRIM4-204ENST00000447480 MAP3K7O43318 606 aa9.25□□□□□ -0.93
TRIM4-204ENST00000447480 PHKG2P15735 406 aa9.25□□□□□ -0.93
TRIM4-204ENST00000447480 EN1Q05925 392 aaPredicted RBP9.25□□□□□ -0.93
TRIM4-204ENST00000447480 C6orf132Q5T0Z8 1188 aa9.25□□□□□ -0.93
TRIM4-204ENST00000447480 FAM184AQ8NB25 1140 aa9.25□□□□□ -0.93
TRIM4-204ENST00000447480 SMARCC1Q92922 1105 aaPredicted RBP9.25□□□□□ -0.93
TRIM4-204ENST00000447480 PLEKHF1Q96S99 279 aa9.25□□□□□ -0.93
TRIM4-204ENST00000447480 GZF1Q9H116 711 aaPredicted RBP9.25□□□□□ -0.93
TRIM4-204ENST00000447480 DDX49Q9Y6V7 483 aaKnown RBP9.25□□□□□ -0.93
TRIM4-204ENST00000447480 BRWD3Q6RI45 1802 aa9.24□□□□□ -0.93
TRIM4-204ENST00000447480 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
TRIM4-204ENST00000447480 BAG4O95429 457 aaKnown RBP9.24□□□□□ -0.93
TRIM4-204ENST00000447480 CYP2E1P05181 493 aaPredicted RBP9.24□□□□□ -0.93
TRIM4-204ENST00000447480 TPM3P06753 285 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms