RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CASKIN1Q8WXD9 1431 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 DLL1O00548 723 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 AGERQ15109 404 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 NR6A1Q15406 480 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 PMFBP1Q8TBY8 1022 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 KIFC2Q96AC6 838 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 ITPKCQ96DU7 683 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 RRP7BPQ9NSQ0 103 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
SDCBP-205ENST00000447267 XRN1Q8IZH2 1706 aaKnown RBP8.06□□□□□ -1.12
SDCBP-205ENST00000447267 SOBPA7XYQ1 873 aa8.06□□□□□ -1.12
SDCBP-205ENST00000447267 FSTL1Q12841 308 aa8.06□□□□□ -1.12
SDCBP-205ENST00000447267 ERFEQ4G0M1 354 aa8.06□□□□□ -1.12
SDCBP-205ENST00000447267 MRPL14Q6P1L8 145 aaKnown RBP8.06□□□□□ -1.12
SDCBP-205ENST00000447267 TRMT44Q8IYL2 757 aaKnown RBP8.06□□□□□ -1.12
SDCBP-205ENST00000447267 C16orf71Q8IYS4 520 aaPredicted RBP8.06□□□□□ -1.12
SDCBP-205ENST00000447267 KANK1Q14678 1352 aa8.06□□□□□ -1.12
SDCBP-205ENST00000447267 TECPR2O15040 1411 aa8.05□□□□□ -1.12
SDCBP-205ENST00000447267 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
SDCBP-205ENST00000447267 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-205ENST00000447267 LBX1P52954 281 aa8.05□□□□□ -1.12
SDCBP-205ENST00000447267 CARD14Q9BXL6 1004 aa8.05□□□□□ -1.12
SDCBP-205ENST00000447267 NWD2Q9ULI1 1742 aa8.05□□□□□ -1.12
SDCBP-205ENST00000447267 NR5A1Q13285 461 aa8.04□□□□□ -1.12
SDCBP-205ENST00000447267 CHRNA2Q15822 529 aa8.04□□□□□ -1.12
SDCBP-205ENST00000447267 ZNF827Q17R98 1081 aa8.04□□□□□ -1.12
SDCBP-205ENST00000447267 ARMC2Q8NEN0 867 aa8.04□□□□□ -1.12
SDCBP-205ENST00000447267 PURBQ96QR8 312 aaKnown RBP8.04□□□□□ -1.12
SDCBP-205ENST00000447267 FKBPLQ9UIM3 349 aa8.04□□□□□ -1.12
SDCBP-205ENST00000447267 NEXMIFQ5QGS0 1516 aa8.03□□□□□ -1.12
SDCBP-205ENST00000447267 AP1G2O75843 785 aa8.03□□□□□ -1.12
SDCBP-205ENST00000447267 FSHRP23945 695 aa8.03□□□□□ -1.12
SDCBP-205ENST00000447267 CTCFP49711 727 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-205ENST00000447267 VEGFBP49765 207 aa8.03□□□□□ -1.12
SDCBP-205ENST00000447267 MAP4K5Q9Y4K4 846 aa8.03□□□□□ -1.12
SDCBP-205ENST00000447267 WIPF1O43516 503 aa8.02□□□□□ -1.13
SDCBP-205ENST00000447267 PSME1Q06323 249 aa8.02□□□□□ -1.13
SDCBP-205ENST00000447267 PRDM11Q9NQV5 511 aa8.02□□□□□ -1.13
SDCBP-205ENST00000447267 NRAPQ86VF7 1730 aa8.02□□□□□ -1.13
SDCBP-205ENST00000447267 TNS3Q68CZ2 1445 aa8.02□□□□□ -1.13
SDCBP-205ENST00000447267 CROCC2H7BZ55 1655 aa8.02□□□□□ -1.13
SDCBP-205ENST00000447267 KIAA1210Q9ULL0 1709 aa8.01□□□□□ -1.13
SDCBP-205ENST00000447267 EIF2AK4Q9P2K8 1649 aaKnown RBP8.01□□□□□ -1.13
SDCBP-205ENST00000447267 USP17L8P0C7I0 530 aa8.01□□□□□ -1.13
SDCBP-205ENST00000447267 RFC5P40937 340 aa8.01□□□□□ -1.13
SDCBP-205ENST00000447267 PDXDC2PQ6P474 469 aa8.01□□□□□ -1.13
SDCBP-205ENST00000447267 MKRN1Q9UHC7 482 aaKnown RBP8.01□□□□□ -1.13
SDCBP-205ENST00000447267 MYO5BQ9ULV0 1848 aa8.01□□□□□ -1.13
SDCBP-205ENST00000447267 EVA1CP58658 441 aa8□□□□□ -1.13
SDCBP-205ENST00000447267 LARP1Q6PKG0 1096 aaKnown RBP8□□□□□ -1.13
SDCBP-205ENST00000447267 VASH1Q7L8A9 365 aaPredicted RBP8□□□□□ -1.13
SDCBP-205ENST00000447267 MEIOBQ8N635 442 aa8□□□□□ -1.13
SDCBP-205ENST00000447267 GPKOWQ92917 476 aaPredicted RBP eCLIP8□□□□□ -1.131e-6■□□□□ 11.3
SDCBP-205ENST00000447267 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
SDCBP-205ENST00000447267 RRAGCQ9HB90 399 aa8□□□□□ -1.13
SDCBP-205ENST00000447267 ERBB4Q15303 1308 aa8□□□□□ -1.13
SDCBP-205ENST00000447267 CCDC144AA2RUR9 1427 aa7.99□□□□□ -1.13
SDCBP-205ENST00000447267 BRPF1P55201 1214 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-205ENST00000447267 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
SDCBP-205ENST00000447267 TCP11L2Q8N4U5 519 aa7.99□□□□□ -1.13
SDCBP-205ENST00000447267 ARHGAP9Q9BRR9 750 aa7.99□□□□□ -1.13
SDCBP-205ENST00000447267 RRBP1Q9P2E9 1410 aaKnown RBP7.99□□□□□ -1.13
SDCBP-205ENST00000447267 NXF1Q9UBU9 619 aaKnown RBP7.99□□□□□ -1.13
SDCBP-205ENST00000447267 KIF15Q9NS87 1388 aa7.98□□□□□ -1.13
SDCBP-205ENST00000447267 ARHGEF5Q12774 1597 aa7.98□□□□□ -1.13
SDCBP-205ENST00000447267 H3BM21 787 aa7.98□□□□□ -1.13
SDCBP-205ENST00000447267 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
SDCBP-205ENST00000447267 NEUROD2Q15784 382 aa7.98□□□□□ -1.13
SDCBP-205ENST00000447267 SLC16A10Q8TF71 515 aa7.98□□□□□ -1.13
SDCBP-205ENST00000447267 AIDAQ96BJ3 306 aa7.98□□□□□ -1.13
SDCBP-205ENST00000447267 DUOX2Q9NRD8 1548 aa7.98□□□□□ -1.13
SDCBP-205ENST00000447267 CBLBQ13191 982 aa7.97□□□□□ -1.13
SDCBP-205ENST00000447267 ZNF326Q5BKZ1 582 aaKnown RBP7.97□□□□□ -1.13
SDCBP-205ENST00000447267 MSL1Q68DK7 614 aa7.97□□□□□ -1.13
SDCBP-205ENST00000447267 SMC1BQ8NDV3 1235 aa7.97□□□□□ -1.13
SDCBP-205ENST00000447267 IL27Q8NEV9 243 aa7.97□□□□□ -1.13
SDCBP-205ENST00000447267 GCC2Q8IWJ2 1684 aa7.97□□□□□ -1.13
SDCBP-205ENST00000447267 ARHGEF10O15013 1369 aa7.97□□□□□ -1.13
SDCBP-205ENST00000447267 NRXN3Q9Y4C0 1643 aa7.96□□□□□ -1.13
SDCBP-205ENST00000447267 HSPA8P11142 646 aaKnown RBP7.96□□□□□ -1.14
SDCBP-205ENST00000447267 GMPRP36959 345 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 PPP1R26Q5T8A7 1209 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-205ENST00000447267 WAPLQ7Z5K2 1190 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 CCDC116Q8IYX3 515 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 ADAM32Q8TC27 787 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 LRRC4BQ9NT99 713 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 LMTK2Q8IWU2 1503 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 PNPLA7Q6ZV29 1317 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 ZC3H4Q9UPT8 1303 aaKnown RBP7.96□□□□□ -1.14
SDCBP-205ENST00000447267 SBNO1A3KN83 1393 aa7.96□□□□□ -1.14
SDCBP-205ENST00000447267 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
SDCBP-205ENST00000447267 SCARF1Q14162 830 aa7.95□□□□□ -1.14
SDCBP-205ENST00000447267 INTS6LQ5JSJ4 861 aaKnown RBP7.95□□□□□ -1.14
SDCBP-205ENST00000447267 MARCH10Q8NA82 808 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-205ENST00000447267 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-205ENST00000447267 GOPCQ9HD26 462 aa7.95□□□□□ -1.14
SDCBP-205ENST00000447267 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
SDCBP-205ENST00000447267 OVOS2A0A0G2JMS6 1433 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms