RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CRY2Q49AN0 593 aa18.79■□□□□ 0.6
LINC00642-202ENST00000442515 LARGE2Q8N3Y3 721 aa18.79■□□□□ 0.6
LINC00642-202ENST00000442515 COL3A1P02461 1466 aaPredicted RBP18.78■□□□□ 0.6
LINC00642-202ENST00000442515 CELF2O95319 508 aaKnown RBP18.78■□□□□ 0.6
LINC00642-202ENST00000442515 GTF2E1P29083 439 aaPredicted RBP18.78■□□□□ 0.6
LINC00642-202ENST00000442515 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
LINC00642-202ENST00000442515 DGKZQ13574 1117 aa18.78■□□□□ 0.6
LINC00642-202ENST00000442515 CC2D2BQ6DHV5 1058 aa18.78■□□□□ 0.6
LINC00642-202ENST00000442515 SLC51AQ86UW1 340 aa18.78■□□□□ 0.6
LINC00642-202ENST00000442515 NBPF26B4DH59 902 aa18.77■□□□□ 0.6
LINC00642-202ENST00000442515 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
LINC00642-202ENST00000442515 SNRPA1P09661 255 aaKnown RBP18.77■□□□□ 0.6
LINC00642-202ENST00000442515 HLFQ16534 295 aa18.77■□□□□ 0.6
LINC00642-202ENST00000442515 NBPF10Q6P3W6 841 aaKnown RBP18.77■□□□□ 0.6
LINC00642-202ENST00000442515 NBPF15Q8N660 670 aa18.77■□□□□ 0.6
LINC00642-202ENST00000442515 CIAPIN1Q6FI81 312 aa18.75■□□□□ 0.59
LINC00642-202ENST00000442515 NUTM1Q86Y26 1132 aa18.75■□□□□ 0.59
LINC00642-202ENST00000442515 NIM1KQ8IY84 436 aa18.75■□□□□ 0.59
LINC00642-202ENST00000442515 HHIPL1Q96JK4 782 aa18.75■□□□□ 0.59
LINC00642-202ENST00000442515 ADARB2Q9NS39 739 aaKnown RBP18.75■□□□□ 0.59
LINC00642-202ENST00000442515 GPRC5DQ9NZD1 345 aa18.75■□□□□ 0.59
LINC00642-202ENST00000442515 RPGRQ92834 1020 aaKnown RBP18.74■□□□□ 0.59
LINC00642-202ENST00000442515 GLIS2Q9BZE0 524 aaPredicted RBP18.74■□□□□ 0.59
LINC00642-202ENST00000442515 GRIPAP1Q4V328 841 aa18.73■□□□□ 0.59
LINC00642-202ENST00000442515 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
LINC00642-202ENST00000442515 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
LINC00642-202ENST00000442515 RIC1Q4ADV7 1423 aa18.73■□□□□ 0.59
LINC00642-202ENST00000442515 PPEF1O14829 653 aaPredicted RBP18.72■□□□□ 0.59
LINC00642-202ENST00000442515 PPIP5K2O43314 1243 aa18.72■□□□□ 0.59
LINC00642-202ENST00000442515 HOXA10P31260 410 aaPredicted RBP18.72■□□□□ 0.59
LINC00642-202ENST00000442515 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
LINC00642-202ENST00000442515 ZNF408Q9H9D4 720 aa18.72■□□□□ 0.59
LINC00642-202ENST00000442515 PDE4DIPQ5VU43 2346 aa18.72■□□□□ 0.59
LINC00642-202ENST00000442515 ZIC5Q96T25 663 aa18.71■□□□□ 0.59
LINC00642-202ENST00000442515 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
LINC00642-202ENST00000442515 KIF7Q2M1P5 1343 aa18.71■□□□□ 0.59
LINC00642-202ENST00000442515 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
LINC00642-202ENST00000442515 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
LINC00642-202ENST00000442515 PRKAR2BP31323 418 aa18.7■□□□□ 0.58
LINC00642-202ENST00000442515 AOC3Q16853 763 aa18.7■□□□□ 0.58
LINC00642-202ENST00000442515 GMPSP49915 693 aaPredicted RBP18.69■□□□□ 0.58
LINC00642-202ENST00000442515 SOX10P56693 466 aa18.69■□□□□ 0.58
LINC00642-202ENST00000442515 CXCL9Q07325 125 aa18.69■□□□□ 0.58
LINC00642-202ENST00000442515 NOGQ13253 232 aa18.69■□□□□ 0.58
LINC00642-202ENST00000442515 PGAP2Q9UHJ9 254 aa18.69■□□□□ 0.58
LINC00642-202ENST00000442515 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
LINC00642-202ENST00000442515 CASP8AP2Q9UKL3 1982 aa18.68■□□□□ 0.58
LINC00642-202ENST00000442515 MCM10Q7L590 875 aa18.68■□□□□ 0.58
LINC00642-202ENST00000442515 RBM17Q96I25 401 aaKnown RBP18.68■□□□□ 0.58
LINC00642-202ENST00000442515 CRAMP1Q96RY5 1269 aa18.68■□□□□ 0.58
LINC00642-202ENST00000442515 RSPH6AQ9H0K4 717 aa18.68■□□□□ 0.58
LINC00642-202ENST00000442515 UBN2Q6ZU65 1347 aa18.68■□□□□ 0.58
LINC00642-202ENST00000442515 PER1O15534 1290 aaPredicted RBP18.67■□□□□ 0.58
LINC00642-202ENST00000442515 C3orf67Q6ZVT6 689 aa18.67■□□□□ 0.58
LINC00642-202ENST00000442515 ZNRF3Q9ULT6 936 aa18.67■□□□□ 0.58
LINC00642-202ENST00000442515 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
LINC00642-202ENST00000442515 GPTP24298 496 aa18.66■□□□□ 0.58
LINC00642-202ENST00000442515 HIRAP54198 1017 aaPredicted RBP18.66■□□□□ 0.58
LINC00642-202ENST00000442515 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
LINC00642-202ENST00000442515 TRPM4Q8TD43 1214 aa18.66■□□□□ 0.58
LINC00642-202ENST00000442515 ZC3H15Q8WU90 426 aaKnown RBP18.66■□□□□ 0.58
LINC00642-202ENST00000442515 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
LINC00642-202ENST00000442515 MAP3K15Q6ZN16 1313 aa18.66■□□□□ 0.58
LINC00642-202ENST00000442515 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
LINC00642-202ENST00000442515 HUNKP57058 714 aa18.65■□□□□ 0.58
LINC00642-202ENST00000442515 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
LINC00642-202ENST00000442515 CDC37L1Q7L3B6 337 aa18.65■□□□□ 0.58
LINC00642-202ENST00000442515 VPS33BQ9H267 617 aa18.65■□□□□ 0.58
LINC00642-202ENST00000442515 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
LINC00642-202ENST00000442515 SUSD4Q5VX71 490 aa18.64■□□□□ 0.57
LINC00642-202ENST00000442515 TTLL7Q6ZT98 887 aa18.64■□□□□ 0.57
LINC00642-202ENST00000442515 BCL2L13Q9BXK5 485 aa18.64■□□□□ 0.57
LINC00642-202ENST00000442515 ATP6V0A2Q9Y487 856 aa18.64■□□□□ 0.57
LINC00642-202ENST00000442515 NTSR2O95665 410 aa18.63■□□□□ 0.57
LINC00642-202ENST00000442515 KIF6Q6ZMV9 814 aa18.63■□□□□ 0.57
LINC00642-202ENST00000442515 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
LINC00642-202ENST00000442515 SAGE1Q9NXZ1 904 aa18.63■□□□□ 0.57
LINC00642-202ENST00000442515 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
LINC00642-202ENST00000442515 SHTN1A0MZ66 631 aa18.62■□□□□ 0.57
LINC00642-202ENST00000442515 FAM155AB1AL88 458 aaPredicted RBP18.62■□□□□ 0.57
LINC00642-202ENST00000442515 RAD17O75943 681 aa18.62■□□□□ 0.57
LINC00642-202ENST00000442515 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
LINC00642-202ENST00000442515 SUPT20HQ8NEM7 779 aa18.62■□□□□ 0.57
LINC00642-202ENST00000442515 RTFDC1Q9BY42 306 aaPredicted RBP18.62■□□□□ 0.57
LINC00642-202ENST00000442515 DLK2Q6UY11 383 aa18.61■□□□□ 0.57
LINC00642-202ENST00000442515 USP48Q86UV5 1035 aa18.61■□□□□ 0.57
LINC00642-202ENST00000442515 ZBTB3Q9H5J0 574 aa18.61■□□□□ 0.57
LINC00642-202ENST00000442515 ABCC4O15439 1325 aa18.6■□□□□ 0.57
LINC00642-202ENST00000442515 KIAA2012Q0VF49 1180 aa18.6■□□□□ 0.57
LINC00642-202ENST00000442515 RGMBQ6NW40 437 aa18.6■□□□□ 0.57
LINC00642-202ENST00000442515 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
LINC00642-202ENST00000442515 MKI67P46013 3256 aaKnown RBP18.59■□□□□ 0.57
LINC00642-202ENST00000442515 TNIP1Q15025 636 aa18.59■□□□□ 0.57
LINC00642-202ENST00000442515 DPP8Q6V1X1 898 aaPredicted RBP18.59■□□□□ 0.57
LINC00642-202ENST00000442515 ZNF34Q8IZ26 560 aa18.59■□□□□ 0.57
LINC00642-202ENST00000442515 NLRP3Q96P20 1036 aa18.59■□□□□ 0.57
LINC00642-202ENST00000442515 CNOT7Q9UIV1 285 aaKnown RBP18.59■□□□□ 0.57
LINC00642-202ENST00000442515 KIF23Q02241 960 aaPredicted RBP18.58■□□□□ 0.56
LINC00642-202ENST00000442515 MICALL2Q8IY33 904 aa18.58■□□□□ 0.56
LINC00642-202ENST00000442515 RNF186Q9NXI6 227 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms