RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 RBM10P98175 930 aaKnown RBP19.99■□□□□ 0.79
TTC3-209ENST00000438055 FAM173BQ6P4H8 233 aa19.99■□□□□ 0.79
TTC3-209ENST00000438055 NEUROD6Q96NK8 337 aa19.99■□□□□ 0.79
TTC3-209ENST00000438055 NOL7Q9UMY1 257 aaKnown RBP19.99■□□□□ 0.79
TTC3-209ENST00000438055 KIAA2012Q0VF49 1180 aa19.98■□□□□ 0.79
TTC3-209ENST00000438055 ZNF830Q96NB3 372 aaPredicted RBP19.98■□□□□ 0.79
TTC3-209ENST00000438055 PXDNLA1KZ92 1463 aa19.98■□□□□ 0.79
TTC3-209ENST00000438055 UBE2HP62256 183 aa19.98■□□□□ 0.79
TTC3-209ENST00000438055 ZKSCAN5Q9Y2L8 839 aa19.98■□□□□ 0.79
TTC3-209ENST00000438055 EPB41L2O43491 1005 aaKnown RBP19.97■□□□□ 0.79
TTC3-209ENST00000438055 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
TTC3-209ENST00000438055 SH2B1Q9NRF2 756 aaPredicted RBP19.97■□□□□ 0.79
TTC3-209ENST00000438055 FMN2Q9NZ56 1722 aa19.97■□□□□ 0.79
TTC3-209ENST00000438055 A0A0D9SFI3 127 aa19.97■□□□□ 0.79
TTC3-209ENST00000438055 ME3Q16798 604 aa19.97■□□□□ 0.79
TTC3-209ENST00000438055 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
TTC3-209ENST00000438055 KIF13AQ9H1H9 1805 aa19.97■□□□□ 0.79
TTC3-209ENST00000438055 ANKRD13DQ6ZTN6 518 aa19.96■□□□□ 0.79
TTC3-209ENST00000438055 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
TTC3-209ENST00000438055 TAOK2Q9UL54 1235 aa19.96■□□□□ 0.79
TTC3-209ENST00000438055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.96■□□□□ 0.79
TTC3-209ENST00000438055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.96■□□□□ 0.79
TTC3-209ENST00000438055 OFD1O75665 1012 aa19.96■□□□□ 0.79
TTC3-209ENST00000438055 GLIPR1L2Q4G1C9 344 aa19.96■□□□□ 0.79
TTC3-209ENST00000438055 MTX1Q13505 466 aa19.96■□□□□ 0.79
TTC3-209ENST00000438055 TPM2P07951 284 aa19.95■□□□□ 0.78
TTC3-209ENST00000438055 PRKCSHP14314 528 aaPredicted RBP19.95■□□□□ 0.78
TTC3-209ENST00000438055 CAMK4Q16566 473 aa19.95■□□□□ 0.78
TTC3-209ENST00000438055 TFIP11Q9UBB9 837 aaKnown RBP19.95■□□□□ 0.78
TTC3-209ENST00000438055 ATF3P18847 181 aa19.95■□□□□ 0.78
TTC3-209ENST00000438055 PDLIM2Q96JY6 352 aa19.95■□□□□ 0.78
TTC3-209ENST00000438055 USP16Q9Y5T5 823 aa19.95■□□□□ 0.78
TTC3-209ENST00000438055 RPAP1Q9BWH6 1393 aaPredicted RBP19.94■□□□□ 0.78
TTC3-209ENST00000438055 A0A087WZG4 1122 aa19.94■□□□□ 0.78
TTC3-209ENST00000438055 SLC27A2O14975 620 aa19.94■□□□□ 0.78
TTC3-209ENST00000438055 HS1BP3Q53T59 392 aa19.94■□□□□ 0.78
TTC3-209ENST00000438055 NWD1Q149M9 1564 aa19.94■□□□□ 0.78
TTC3-209ENST00000438055 IGKV5-2P06315 115 aa19.94■□□□□ 0.78
TTC3-209ENST00000438055 TPCN1Q9ULQ1 816 aa19.94■□□□□ 0.78
TTC3-209ENST00000438055 ZSWIM6Q9HCJ5 1215 aa19.94■□□□□ 0.78
TTC3-209ENST00000438055 CABP4P57796 275 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 KRT85P78386 507 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 GCKRQ14397 625 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 MTMR6Q9Y217 621 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 NEURL1BA8MQ27 555 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 H3BQV1 296 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 ADCY5O95622 1261 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 EPHA10Q5JZY3 1008 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 IFFO2Q5TF58 517 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 DDX11Q96FC9 970 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 PXDNQ92626 1479 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 DDX46Q7L014 1031 aaKnown RBP19.93■□□□□ 0.78
TTC3-209ENST00000438055 FAM184AQ8NB25 1140 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 LRRC2Q9BYS8 371 aa19.93■□□□□ 0.78
TTC3-209ENST00000438055 PPFIA3O75145 1194 aa19.92■□□□□ 0.78
TTC3-209ENST00000438055 TFCP2Q12800 502 aa19.92■□□□□ 0.78
TTC3-209ENST00000438055 KAZALD1Q96I82 304 aa19.92■□□□□ 0.78
TTC3-209ENST00000438055 SLC52A2Q9HAB3 445 aa19.92■□□□□ 0.78
TTC3-209ENST00000438055 SPC24Q8NBT2 197 aa19.92■□□□□ 0.78
TTC3-209ENST00000438055 LETM1O95202 739 aaPredicted RBP19.91■□□□□ 0.78
TTC3-209ENST00000438055 CEBPZQ03701 1054 aaKnown RBP19.91■□□□□ 0.78
TTC3-209ENST00000438055 NECTIN1Q15223 517 aa19.91■□□□□ 0.78
TTC3-209ENST00000438055 CCDC129Q6ZRS4 1044 aa19.91■□□□□ 0.78
TTC3-209ENST00000438055 PDCP20941 246 aa19.91■□□□□ 0.78
TTC3-209ENST00000438055 ZNF589Q86UQ0 364 aaPredicted RBP19.91■□□□□ 0.78
TTC3-209ENST00000438055 IFNL2Q8IZJ0 200 aa19.91■□□□□ 0.78
TTC3-209ENST00000438055 BICD2Q8TD16 824 aa19.91■□□□□ 0.78
TTC3-209ENST00000438055 TTC12Q9H892 705 aaPredicted RBP19.9■□□□□ 0.78
TTC3-209ENST00000438055 NPHP3Q7Z494 1330 aa19.9■□□□□ 0.78
TTC3-209ENST00000438055 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
TTC3-209ENST00000438055 MAP4K1Q92918 833 aa19.9■□□□□ 0.78
TTC3-209ENST00000438055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.9■□□□□ 0.78
TTC3-209ENST00000438055 FAM208AQ9UK61 1670 aaKnown RBP19.9■□□□□ 0.78
TTC3-209ENST00000438055 ERBB3P21860 1342 aa19.9■□□□□ 0.78
TTC3-209ENST00000438055 ANKRD1Q15327 319 aa19.9■□□□□ 0.78
TTC3-209ENST00000438055 CDC37L1Q7L3B6 337 aa19.9■□□□□ 0.78
TTC3-209ENST00000438055 METTL22Q9BUU2 404 aaPredicted RBP19.9■□□□□ 0.78
TTC3-209ENST00000438055 UQCRHLA0A096LP55 91 aa19.89■□□□□ 0.78
TTC3-209ENST00000438055 UQCRHP07919 91 aa19.89■□□□□ 0.78
TTC3-209ENST00000438055 DRC7Q8IY82 874 aa19.89■□□□□ 0.78
TTC3-209ENST00000438055 CKAP2LQ8IYA6 745 aa19.89■□□□□ 0.78
TTC3-209ENST00000438055 TM6SF1Q9BZW5 370 aa19.89■□□□□ 0.78
TTC3-209ENST00000438055 TAF6LQ9Y6J9 622 aa19.89■□□□□ 0.78
TTC3-209ENST00000438055 COL9A3Q14050 684 aaPredicted RBP19.89■□□□□ 0.77
TTC3-209ENST00000438055 FMNL2Q96PY5 1086 aa19.89■□□□□ 0.77
TTC3-209ENST00000438055 DBNDD2Q9BQY9 259 aa19.89■□□□□ 0.77
TTC3-209ENST00000438055 USP42Q9H9J4 1324 aaKnown RBP19.88■□□□□ 0.77
TTC3-209ENST00000438055 CHGBP05060 677 aa19.88■□□□□ 0.77
TTC3-209ENST00000438055 LMBR1LQ6UX01 489 aa19.88■□□□□ 0.77
TTC3-209ENST00000438055 SPATA32Q96LK8 384 aa19.88■□□□□ 0.77
TTC3-209ENST00000438055 SEC62Q99442 399 aaKnown RBP19.88■□□□□ 0.77
TTC3-209ENST00000438055 ADGRL3Q9HAR2 1447 aa19.88■□□□□ 0.77
TTC3-209ENST00000438055 XRN1Q8IZH2 1706 aaKnown RBP19.88■□□□□ 0.77
TTC3-209ENST00000438055 RRP9O43818 475 aaKnown RBP19.87■□□□□ 0.77
TTC3-209ENST00000438055 PHKG2P15735 406 aa19.87■□□□□ 0.77
TTC3-209ENST00000438055 CCDC192P0DO97 292 aa19.87■□□□□ 0.77
TTC3-209ENST00000438055 PDIA6Q15084 440 aa19.87■□□□□ 0.77
TTC3-209ENST00000438055 CCDC85AQ96PX6 553 aaPredicted RBP19.87■□□□□ 0.77
TTC3-209ENST00000438055 DBNLQ9UJU6 430 aaKnown RBP19.87■□□□□ 0.77
TTC3-209ENST00000438055 GORABQ5T7V8 394 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms