RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
RPE-207ENST00000435437 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
RPE-207ENST00000435437 ZNF526Q8TF50 670 aaPredicted RBP11.51□□□□□ -0.57
RPE-207ENST00000435437 ZNF622Q969S3 477 aaKnown RBP eCLIP11.51□□□□□ -0.57
RPE-207ENST00000435437 ZNF652Q9Y2D9 606 aa11.51□□□□□ -0.57
RPE-207ENST00000435437 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
RPE-207ENST00000435437 ZNF521Q96K83 1311 aa11.51□□□□□ -0.57
RPE-207ENST00000435437 GNAI1P63096 354 aa11.5□□□□□ -0.57
RPE-207ENST00000435437 TCIRG1Q13488 830 aa11.5□□□□□ -0.57
RPE-207ENST00000435437 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
RPE-207ENST00000435437 TPTE2Q6XPS3 522 aa11.5□□□□□ -0.57
RPE-207ENST00000435437 KIF6Q6ZMV9 814 aa11.5□□□□□ -0.57
RPE-207ENST00000435437 MASTLQ96GX5 879 aa11.5□□□□□ -0.57
RPE-207ENST00000435437 ISCA1Q9BUE6 129 aa11.5□□□□□ -0.57
RPE-207ENST00000435437 NMRK2Q9NPI5 230 aa11.5□□□□□ -0.57
RPE-207ENST00000435437 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
RPE-207ENST00000435437 POTECB2RU33 542 aa11.49□□□□□ -0.57
RPE-207ENST00000435437 C1QTNF8P60827 252 aa11.49□□□□□ -0.57
RPE-207ENST00000435437 ST5P78524 1137 aa11.49□□□□□ -0.57
RPE-207ENST00000435437 SLC10A5Q5PT55 438 aa11.49□□□□□ -0.57
RPE-207ENST00000435437 G2E3Q7L622 706 aa11.49□□□□□ -0.57
RPE-207ENST00000435437 RNF181Q9P0P0 153 aa11.49□□□□□ -0.57
RPE-207ENST00000435437 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
RPE-207ENST00000435437 TCERG1O14776 1098 aaKnown RBP11.48□□□□□ -0.57
RPE-207ENST00000435437 NPR1P16066 1061 aa11.48□□□□□ -0.57
RPE-207ENST00000435437 HOXA10P31260 410 aaPredicted RBP11.48□□□□□ -0.57
RPE-207ENST00000435437 PLBD2Q8NHP8 589 aa11.48□□□□□ -0.57
RPE-207ENST00000435437 PDZRN3Q9UPQ7 1066 aa11.48□□□□□ -0.57
RPE-207ENST00000435437 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
RPE-207ENST00000435437 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
RPE-207ENST00000435437 FANCIQ9NVI1 1328 aa11.48□□□□□ -0.57
RPE-207ENST00000435437 DUOX1Q9NRD9 1551 aa11.48□□□□□ -0.57
RPE-207ENST00000435437 LTBP1Q14766 1721 aa11.47□□□□□ -0.57
RPE-207ENST00000435437 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
RPE-207ENST00000435437 IL16Q14005 1332 aa11.47□□□□□ -0.57
RPE-207ENST00000435437 ATP5J2-PTCD1G3V325 749 aa11.47□□□□□ -0.57
RPE-207ENST00000435437 NPM2Q86SE8 214 aaKnown RBP11.47□□□□□ -0.57
RPE-207ENST00000435437 FAM9BQ8IZU0 186 aa11.47□□□□□ -0.57
RPE-207ENST00000435437 DBF4Q9UBU7 674 aaPredicted RBP11.47□□□□□ -0.57
RPE-207ENST00000435437 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
RPE-207ENST00000435437 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
RPE-207ENST00000435437 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
RPE-207ENST00000435437 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.57
RPE-207ENST00000435437 VAMP4O75379 141 aa11.45□□□□□ -0.58
RPE-207ENST00000435437 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
RPE-207ENST00000435437 LMNB1P20700 586 aa11.45□□□□□ -0.58
RPE-207ENST00000435437 UTP14AQ9BVJ6 771 aaKnown RBP11.45□□□□□ -0.58
RPE-207ENST00000435437 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
RPE-207ENST00000435437 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
RPE-207ENST00000435437 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
RPE-207ENST00000435437 IGKV5-2P06315 115 aa11.44□□□□□ -0.58
RPE-207ENST00000435437 TRIM28Q13263 835 aaKnown RBP11.44□□□□□ -0.58
RPE-207ENST00000435437 WDR63Q8IWG1 891 aa11.44□□□□□ -0.58
RPE-207ENST00000435437 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
RPE-207ENST00000435437 ABCC4O15439 1325 aa11.43□□□□□ -0.58
RPE-207ENST00000435437 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
RPE-207ENST00000435437 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
RPE-207ENST00000435437 TWISTNBQ3B726 338 aaPredicted RBP11.43□□□□□ -0.58
RPE-207ENST00000435437 PPP1R42Q7Z4L9 355 aa11.43□□□□□ -0.58
RPE-207ENST00000435437 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
RPE-207ENST00000435437 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
RPE-207ENST00000435437 ZNF541Q9H0D2 1346 aa11.42□□□□□ -0.58
RPE-207ENST00000435437 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
RPE-207ENST00000435437 NPHP1O15259 732 aa11.42□□□□□ -0.58
RPE-207ENST00000435437 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
RPE-207ENST00000435437 TAOK3Q9H2K8 898 aa11.42□□□□□ -0.58
RPE-207ENST00000435437 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
RPE-207ENST00000435437 ZNF277Q9NRM2 450 aaPredicted RBP11.42□□□□□ -0.58
RPE-207ENST00000435437 RNF123Q5XPI4 1314 aa11.41□□□□□ -0.58
RPE-207ENST00000435437 SH3TC1Q8TE82 1336 aa11.41□□□□□ -0.58
RPE-207ENST00000435437 GLTPD2A6NH11 291 aa11.41□□□□□ -0.58
RPE-207ENST00000435437 FKBP4Q02790 459 aaKnown RBP eCLIP11.41□□□□□ -0.58
RPE-207ENST00000435437 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
RPE-207ENST00000435437 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
RPE-207ENST00000435437 CELF1Q92879 486 aaKnown RBP11.41□□□□□ -0.58
RPE-207ENST00000435437 MYD88Q99836 296 aa11.41□□□□□ -0.58
RPE-207ENST00000435437 METTL22Q9BUU2 404 aaPredicted RBP11.41□□□□□ -0.58
RPE-207ENST00000435437 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
RPE-207ENST00000435437 MYH3P11055 1940 aa11.41□□□□□ -0.58
RPE-207ENST00000435437 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.58
RPE-207ENST00000435437 ZNF646O15015 1829 aaPredicted RBP11.4□□□□□ -0.58
RPE-207ENST00000435437 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 DDNO94850 711 aaPredicted RBP11.4□□□□□ -0.58
RPE-207ENST00000435437 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
RPE-207ENST00000435437 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 CASP7P55210 303 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 SF3B3Q15393 1217 aaKnown RBP11.4□□□□□ -0.58
RPE-207ENST00000435437 CCDC30Q5VVM6 783 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 NLRP3Q96P20 1036 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
RPE-207ENST00000435437 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
RPE-207ENST00000435437 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
RPE-207ENST00000435437 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
RPE-207ENST00000435437 CWF19L2Q2TBE0 894 aaKnown RBP11.39□□□□□ -0.59
RPE-207ENST00000435437 KSR2Q6VAB6 950 aa11.39□□□□□ -0.59
RPE-207ENST00000435437 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
RPE-207ENST00000435437 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
RPE-207ENST00000435437 PSMD1Q99460 953 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms