RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 UBR3Q6ZT12 1888 aa22.82■■□□□ 1.24
HMGN1-206ENST00000431390 CEP85Q6P2H3 762 aa22.82■■□□□ 1.24
HMGN1-206ENST00000431390 C9orf78Q9NZ63 289 aaPredicted RBP22.82■■□□□ 1.24
HMGN1-206ENST00000431390 NUP98P52948 1817 aa22.81■■□□□ 1.24
HMGN1-206ENST00000431390 ERVV-1B6SEH8 477 aa22.81■■□□□ 1.24
HMGN1-206ENST00000431390 GRM8O00222 908 aa22.81■■□□□ 1.24
HMGN1-206ENST00000431390 HMGB2P26583 209 aaKnown RBP22.81■■□□□ 1.24
HMGN1-206ENST00000431390 GCKRQ14397 625 aa22.81■■□□□ 1.24
HMGN1-206ENST00000431390 DZIP3Q86Y13 1208 aaKnown RBP22.81■■□□□ 1.24
HMGN1-206ENST00000431390 NBPF7P0C2Y1 421 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-206ENST00000431390 GIGYF2Q6Y7W6 1299 aaKnown RBP22.8■■□□□ 1.24
HMGN1-206ENST00000431390 SIRT2Q8IXJ6 389 aa22.8■■□□□ 1.24
HMGN1-206ENST00000431390 COL15A1P39059 1388 aa22.8■■□□□ 1.24
HMGN1-206ENST00000431390 TCIRG1Q13488 830 aa22.8■■□□□ 1.24
HMGN1-206ENST00000431390 HSP90AB3PQ58FF7 597 aa22.8■■□□□ 1.24
HMGN1-206ENST00000431390 BCORQ6W2J9 1755 aa22.79■■□□□ 1.24
HMGN1-206ENST00000431390 A0A087WZG4 1122 aa22.79■■□□□ 1.24
HMGN1-206ENST00000431390 TRIM28Q13263 835 aaKnown RBP22.79■■□□□ 1.24
HMGN1-206ENST00000431390 CCDC191Q8NCU4 936 aa22.79■■□□□ 1.24
HMGN1-206ENST00000431390 ISCA1Q9BUE6 129 aa22.79■■□□□ 1.24
HMGN1-206ENST00000431390 LRRFIP2Q9Y608 721 aaKnown RBP22.79■■□□□ 1.24
HMGN1-206ENST00000431390 ATP5J2-PTCD1G3V325 749 aa22.78■■□□□ 1.24
HMGN1-206ENST00000431390 HMMRO75330 724 aa22.77■■□□□ 1.24
HMGN1-206ENST00000431390 SMC5Q8IY18 1101 aa22.77■■□□□ 1.24
HMGN1-206ENST00000431390 CWC25Q9NXE8 425 aaPredicted RBP22.77■■□□□ 1.24
HMGN1-206ENST00000431390 CD2APQ9Y5K6 639 aa22.77■■□□□ 1.24
HMGN1-206ENST00000431390 RPS6KA4O75676 772 aa22.76■■□□□ 1.23
HMGN1-206ENST00000431390 FLAD1Q8NFF5 587 aa22.76■■□□□ 1.23
HMGN1-206ENST00000431390 GCC1Q96CN9 775 aa22.76■■□□□ 1.23
HMGN1-206ENST00000431390 TBC1D2BQ9UPU7 963 aa22.76■■□□□ 1.23
HMGN1-206ENST00000431390 RGL2O15211 777 aa22.76■■□□□ 1.23
HMGN1-206ENST00000431390 ATP8B2P98198 1209 aa22.76■■□□□ 1.23
HMGN1-206ENST00000431390 AMIGO3Q86WK7 504 aa22.76■■□□□ 1.23
HMGN1-206ENST00000431390 CAMTA2O94983 1202 aa22.74■■□□□ 1.23
HMGN1-206ENST00000431390 HLFQ16534 295 aa22.74■■□□□ 1.23
HMGN1-206ENST00000431390 AK7Q96M32 723 aa22.74■■□□□ 1.23
HMGN1-206ENST00000431390 SCN7AQ01118 1682 aa22.74■■□□□ 1.23
HMGN1-206ENST00000431390 SMIM5Q71RC9 77 aa22.73■■□□□ 1.23
HMGN1-206ENST00000431390 H7C1W4 665 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 GNPATO15228 680 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 PHF14O94880 888 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 MTX1Q13505 466 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 DCTPP1Q9H773 170 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 RTCBQ9Y3I0 505 aaKnown RBP22.72■■□□□ 1.23
HMGN1-206ENST00000431390 CASP7P55210 303 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 SUCLG2Q96I99 432 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 WWC3Q9ULE0 1092 aa22.72■■□□□ 1.23
HMGN1-206ENST00000431390 SSH3Q8TE77 659 aa22.71■■□□□ 1.23
HMGN1-206ENST00000431390 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
HMGN1-206ENST00000431390 CLEC4GQ6UXB4 293 aa22.7■■□□□ 1.22
HMGN1-206ENST00000431390 UBE3BQ7Z3V4 1068 aa22.7■■□□□ 1.22
HMGN1-206ENST00000431390 ZNF34Q8IZ26 560 aa22.7■■□□□ 1.22
HMGN1-206ENST00000431390 KAZALD1Q96I82 304 aa22.7■■□□□ 1.22
HMGN1-206ENST00000431390 GPBP1L1Q9HC44 474 aaPredicted RBP22.7■■□□□ 1.22
HMGN1-206ENST00000431390 CEP350Q5VT06 3117 aa22.7■■□□□ 1.22
HMGN1-206ENST00000431390 C4AP0C0L4 1744 aa22.7■■□□□ 1.22
HMGN1-206ENST00000431390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.69■■□□□ 1.22
HMGN1-206ENST00000431390 PNMA6EA0A0J9YXQ4 647 aa22.69■■□□□ 1.22
HMGN1-206ENST00000431390 NLRP10Q86W26 655 aa22.69■■□□□ 1.22
HMGN1-206ENST00000431390 ZNF526Q8TF50 670 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-206ENST00000431390 PDZRN3Q9UPQ7 1066 aa22.69■■□□□ 1.22
HMGN1-206ENST00000431390 ADRA2BP18089 450 aa22.68■■□□□ 1.22
HMGN1-206ENST00000431390 POLA2Q14181 598 aa22.68■■□□□ 1.22
HMGN1-206ENST00000431390 PPP1R42Q7Z4L9 355 aa22.68■■□□□ 1.22
HMGN1-206ENST00000431390 NARFQ9UHQ1 456 aa22.68■■□□□ 1.22
HMGN1-206ENST00000431390 PCCAP05165 728 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-206ENST00000431390 ZBTB38Q8NAP3 1195 aaPredicted RBP22.67■■□□□ 1.22
HMGN1-206ENST00000431390 BICC1Q9H694 974 aaKnown RBP22.67■■□□□ 1.22
HMGN1-206ENST00000431390 SRGAP3O43295 1099 aa22.67■■□□□ 1.22
HMGN1-206ENST00000431390 NUCB1Q02818 461 aa22.67■■□□□ 1.22
HMGN1-206ENST00000431390 GPTP24298 496 aa22.66■■□□□ 1.22
HMGN1-206ENST00000431390 PARP10Q53GL7 1025 aa22.66■■□□□ 1.22
HMGN1-206ENST00000431390 UBN2Q6ZU65 1347 aa22.65■■□□□ 1.22
HMGN1-206ENST00000431390 CDHR2Q9BYE9 1310 aa22.65■■□□□ 1.22
HMGN1-206ENST00000431390 RABL6Q3YEC7 729 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-206ENST00000431390 TRAPPC3LQ5T215 181 aa22.65■■□□□ 1.22
HMGN1-206ENST00000431390 IFFO2Q5TF58 517 aa22.65■■□□□ 1.22
HMGN1-206ENST00000431390 ARHGEF1Q92888 912 aaKnown RBP22.65■■□□□ 1.22
HMGN1-206ENST00000431390 SSFA2P28290 1259 aa22.64■■□□□ 1.22
HMGN1-206ENST00000431390 KIF13BQ9NQT8 1826 aa22.64■■□□□ 1.21
HMGN1-206ENST00000431390 ZPR1O75312 459 aa22.63■■□□□ 1.21
HMGN1-206ENST00000431390 EPHA10Q5JZY3 1008 aa22.63■■□□□ 1.21
HMGN1-206ENST00000431390 JARID2Q92833 1246 aaPredicted RBP22.63■■□□□ 1.21
HMGN1-206ENST00000431390 KIAA1551Q9HCM1 1747 aa22.63■■□□□ 1.21
HMGN1-206ENST00000431390 CHD1LQ86WJ1 897 aa22.63■■□□□ 1.21
HMGN1-206ENST00000431390 PLA2G12BQ9BX93 195 aa22.63■■□□□ 1.21
HMGN1-206ENST00000431390 ANKRD45Q5TZF3 282 aa22.62■■□□□ 1.21
HMGN1-206ENST00000431390 USPL1Q5W0Q7 1092 aa22.62■■□□□ 1.21
HMGN1-206ENST00000431390 NIP7Q9Y221 180 aaKnown RBP eCLIP22.62■■□□□ 1.21
HMGN1-206ENST00000431390 MYH3P11055 1940 aa22.62■■□□□ 1.21
HMGN1-206ENST00000431390 USP42Q9H9J4 1324 aaKnown RBP22.61■■□□□ 1.21
HMGN1-206ENST00000431390 RFC4P35249 363 aa22.61■■□□□ 1.21
HMGN1-206ENST00000431390 FOXO4P98177 505 aa22.61■■□□□ 1.21
HMGN1-206ENST00000431390 BCL2L12Q9HB09 334 aa22.61■■□□□ 1.21
HMGN1-206ENST00000431390 TRMT112Q9UI30 125 aaKnown RBP22.61■■□□□ 1.21
HMGN1-206ENST00000431390 HSP90AB4PQ58FF6 505 aa22.6■■□□□ 1.21
HMGN1-206ENST00000431390 SKAP1Q86WV1 359 aa22.6■■□□□ 1.21
HMGN1-206ENST00000431390 FAM89AQ96GI7 184 aa22.6■■□□□ 1.21
HMGN1-206ENST00000431390 NOP58Q9Y2X3 529 aaKnown RBP22.6■■□□□ 1.21
HMGN1-206ENST00000431390 LAMB2P55268 1798 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms