RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 TNNT1P13805 278 aa5.94□□□□□ -1.46
ITGB1-205ENST00000423113 TAF7Q15545 349 aaPredicted RBP5.94□□□□□ -1.46
ITGB1-205ENST00000423113 ZNF526Q8TF50 670 aaPredicted RBP5.94□□□□□ -1.46
ITGB1-205ENST00000423113 GNAI1P63096 354 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 WDR43Q15061 677 aaKnown RBP eCLIP5.93□□□□□ -1.46
ITGB1-205ENST00000423113 PROM2Q8N271 834 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 PIGBQ92521 554 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 ARHGAP45Q92619 1136 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 CCDC39Q9UFE4 941 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 C8orf34Q49A92 452 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 RNF214Q8ND24 703 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 CDCA7LQ96GN5 454 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 TEX13AQ9BXU3 409 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-205ENST00000423113 TBC1D2Q9BYX2 928 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 CALCOCO1Q9P1Z2 691 aa5.93□□□□□ -1.46
ITGB1-205ENST00000423113 GOLGA6L6A8MZA4 724 aa5.92□□□□□ -1.46
ITGB1-205ENST00000423113 MYCNP04198 464 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 RGS22Q8NE09 1264 aa5.92□□□□□ -1.46
ITGB1-205ENST00000423113 BCCIPQ9P287 314 aaKnown RBP eCLIP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 CCDC9Q9Y3X0 531 aaKnown RBP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 WDR90Q96KV7 1748 aa5.92□□□□□ -1.46
ITGB1-205ENST00000423113 ABCC4O15439 1325 aa5.92□□□□□ -1.46
ITGB1-205ENST00000423113 ZNF790Q6PG37 636 aa5.92□□□□□ -1.46
ITGB1-205ENST00000423113 UPF1Q92900 1129 aaKnown RBP eCLIP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 SGIP1Q9BQI5 828 aa5.92□□□□□ -1.46
ITGB1-205ENST00000423113 GIGYF1O75420 1035 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 GTF2A1P52655 376 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 FAM98CQ17RN3 349 aaKnown RBP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 ZNF530Q6P9A1 599 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 INTS5Q6P9B9 1019 aaKnown RBP5.92□□□□□ -1.46
ITGB1-205ENST00000423113 TMX1Q9H3N1 280 aa5.92□□□□□ -1.46
ITGB1-205ENST00000423113 U2AF1L5P0DN76 240 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 CYP19A1P11511 503 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 IRX5P78411 483 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 U2AF1Q01081 240 aaKnown RBP eCLIP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 CAVIN1Q6NZI2 390 aaKnown RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 SAMD1Q6SPF0 538 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 TSPYL1Q9H0U9 437 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 KLRG2A4D1S0 409 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 RBM25P49756 843 aaKnown RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 LGR6Q9HBX8 967 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 TOMM22Q9NS69 142 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 NLRP2Q9NX02 1062 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 THSD7BQ9C0I4 1608 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 ADCY9O60503 1353 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 SCN4AP35499 1836 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 U2AF2P26368 475 aaKnown RBP eCLIP5.91□□□□□ -1.464e-6■□□□□ 8.3
ITGB1-205ENST00000423113 TRIM28Q13263 835 aaKnown RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 SF3B2Q13435 895 aaKnown RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 GAS2L3Q86XJ1 694 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 USHBP1Q8N6Y0 703 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 BANK1Q8NDB2 785 aa5.91□□□□□ -1.46
ITGB1-205ENST00000423113 SPINK5Q9NQ38 1064 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-205ENST00000423113 STRN4Q9NRL3 753 aa5.9□□□□□ -1.46
ITGB1-205ENST00000423113 DIAPH3Q9NSV4 1193 aa5.9□□□□□ -1.46
ITGB1-205ENST00000423113 PTPRCP08575 1304 aa5.9□□□□□ -1.46
ITGB1-205ENST00000423113 ERVV-1B6SEH8 477 aa5.9□□□□□ -1.46
ITGB1-205ENST00000423113 SOX12O15370 315 aa5.9□□□□□ -1.46
ITGB1-205ENST00000423113 CSB-PGBD3P0DP91 1061 aa5.9□□□□□ -1.46
ITGB1-205ENST00000423113 SSFA2P28290 1259 aa5.9□□□□□ -1.46
ITGB1-205ENST00000423113 SLX4Q8IY92 1834 aa5.9□□□□□ -1.47
ITGB1-205ENST00000423113 MAPK8IP3Q9UPT6 1336 aa5.9□□□□□ -1.47
ITGB1-205ENST00000423113 VAMP4O75379 141 aa5.9□□□□□ -1.47
ITGB1-205ENST00000423113 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.47
ITGB1-205ENST00000423113 EIF5P55010 431 aaKnown RBP5.9□□□□□ -1.47
ITGB1-205ENST00000423113 ZKSCAN5Q9Y2L8 839 aa5.9□□□□□ -1.47
ITGB1-205ENST00000423113 LOC285556D6RIA3 1793 aa5.9□□□□□ -1.47
ITGB1-205ENST00000423113 APAF1O14727 1248 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 HMOX1P09601 288 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 HSP90B1P14625 803 aaKnown RBP5.89□□□□□ -1.47
ITGB1-205ENST00000423113 C1orf141Q5JVX7 400 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 C20orf194Q5TEA3 1177 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 BAG6P46379 1132 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 GOLGA6L1Q8N7Z2 621 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 ATP2B3Q16720 1220 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 JARID2Q92833 1246 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-205ENST00000423113 AK7Q96M32 723 aa5.89□□□□□ -1.47
ITGB1-205ENST00000423113 GREB1LQ9C091 1923 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-205ENST00000423113 GOLGA2Q08379 1002 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 ITPK1Q13572 414 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 AXDND1Q5T1B0 1012 aaPredicted RBP5.88□□□□□ -1.47
ITGB1-205ENST00000423113 MCTP1Q6DN14 999 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 FMNL2Q96PY5 1086 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 C22orf23Q9BZE7 217 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 LRRC4BQ9NT99 713 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 SEC24BO95487 1268 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 CLEC4GQ6UXB4 293 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 LINC00116Q8NCU8 138 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 ZNF622Q969S3 477 aaKnown RBP eCLIP5.88□□□□□ -1.474e-6■■■□□ 15.4
ITGB1-205ENST00000423113 PLA2G12BQ9BX93 195 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 NOL7Q9UMY1 257 aaKnown RBP5.88□□□□□ -1.47
ITGB1-205ENST00000423113 MYO5AQ9Y4I1 1855 aaKnown RBP5.88□□□□□ -1.47
ITGB1-205ENST00000423113 CDHR2Q9BYE9 1310 aa5.88□□□□□ -1.47
ITGB1-205ENST00000423113 LOC102724159A0A0B4J2E5 919 aa5.87□□□□□ -1.47
ITGB1-205ENST00000423113 A0A0G2JS52 829 aa5.87□□□□□ -1.47
ITGB1-205ENST00000423113 SNRPA1P09661 255 aaKnown RBP5.87□□□□□ -1.47
ITGB1-205ENST00000423113 CASP7P55210 303 aa5.87□□□□□ -1.47
ITGB1-205ENST00000423113 PWP2Q15269 919 aaKnown RBP5.87□□□□□ -1.47
ITGB1-205ENST00000423113 FOXD4L5Q5VV16 416 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 277.5 ms