RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 ERFEQ4G0M1 354 aa16.18■□□□□ 0.18
AC004540.1-205ENST00000420774 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
AC004540.1-205ENST00000420774 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
AC004540.1-205ENST00000420774 CD2APQ9Y5K6 639 aa16.18■□□□□ 0.18
AC004540.1-205ENST00000420774 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
AC004540.1-205ENST00000420774 IGKV5-2P06315 115 aa16.17■□□□□ 0.18
AC004540.1-205ENST00000420774 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
AC004540.1-205ENST00000420774 PARP10Q53GL7 1025 aa16.17■□□□□ 0.18
AC004540.1-205ENST00000420774 SYNE4Q8N205 404 aa16.17■□□□□ 0.18
AC004540.1-205ENST00000420774 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
AC004540.1-205ENST00000420774 UTRNP46939 3433 aa16.17■□□□□ 0.18
AC004540.1-205ENST00000420774 IBTKQ9P2D0 1353 aaPredicted RBP16.16■□□□□ 0.18
AC004540.1-205ENST00000420774 CHRNA5P30532 468 aa16.16■□□□□ 0.18
AC004540.1-205ENST00000420774 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
AC004540.1-205ENST00000420774 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
AC004540.1-205ENST00000420774 TPTE2Q6XPS3 522 aa16.16■□□□□ 0.18
AC004540.1-205ENST00000420774 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
AC004540.1-205ENST00000420774 NOB1Q9ULX3 412 aaKnown RBP16.16■□□□□ 0.18
AC004540.1-205ENST00000420774 A0A0G2JLW4 131 aa16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 ST5P78524 1137 aa16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 PPP1R42Q7Z4L9 355 aa16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 JARID2Q92833 1246 aaPredicted RBP16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 TRMT112Q9UI30 125 aaKnown RBP16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 PTPRCP08575 1304 aa16.15■□□□□ 0.18
AC004540.1-205ENST00000420774 NEURL1BA8MQ27 555 aa16.14■□□□□ 0.17
AC004540.1-205ENST00000420774 DPEP1P16444 411 aa16.14■□□□□ 0.17
AC004540.1-205ENST00000420774 NEXNQ0ZGT2 675 aa16.14■□□□□ 0.17
AC004540.1-205ENST00000420774 SLC4A10Q6U841 1118 aa16.14■□□□□ 0.17
AC004540.1-205ENST00000420774 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
AC004540.1-205ENST00000420774 TNNQ9UQP3 1299 aa16.14■□□□□ 0.17
AC004540.1-205ENST00000420774 KCNA3P22001 575 aa16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 BRPF1P55201 1214 aaPredicted RBP16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 TRIM28Q13263 835 aaKnown RBP16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 BRIP1Q9BX63 1249 aa16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 CWC25Q9NXE8 425 aaPredicted RBP16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 TAF1P21675 1872 aa16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 MYH3P11055 1940 aa16.13■□□□□ 0.17
AC004540.1-205ENST00000420774 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-205ENST00000420774 TGFB2P61812 414 aa16.12■□□□□ 0.17
AC004540.1-205ENST00000420774 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
AC004540.1-205ENST00000420774 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-205ENST00000420774 SH3TC1Q8TE82 1336 aa16.12■□□□□ 0.17
AC004540.1-205ENST00000420774 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
AC004540.1-205ENST00000420774 C2CD5Q86YS7 1000 aa16.11■□□□□ 0.17
AC004540.1-205ENST00000420774 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
AC004540.1-205ENST00000420774 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
AC004540.1-205ENST00000420774 PDE6BP35913 854 aa16.1■□□□□ 0.17
AC004540.1-205ENST00000420774 GCKRQ14397 625 aa16.1■□□□□ 0.17
AC004540.1-205ENST00000420774 ZBTB38Q8NAP3 1195 aaPredicted RBP16.1■□□□□ 0.17
AC004540.1-205ENST00000420774 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
AC004540.1-205ENST00000420774 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
AC004540.1-205ENST00000420774 COL4A1P02462 1669 aa16.09■□□□□ 0.17
AC004540.1-205ENST00000420774 TRIM27P14373 513 aa16.09■□□□□ 0.17
AC004540.1-205ENST00000420774 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
AC004540.1-205ENST00000420774 RCAN3Q9UKA8 241 aa16.09■□□□□ 0.17
AC004540.1-205ENST00000420774 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
AC004540.1-205ENST00000420774 H0YIN7 160 aa16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 IRS4O14654 1257 aaPredicted RBP16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 PCCAP05165 728 aaPredicted RBP16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 SRGNP10124 158 aa16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 YBX3P16989 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 UBE3BQ7Z3V4 1068 aa16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 CLUAP1Q96AJ1 413 aa16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
AC004540.1-205ENST00000420774 KLRG2A4D1S0 409 aaPredicted RBP16.07■□□□□ 0.16
AC004540.1-205ENST00000420774 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
AC004540.1-205ENST00000420774 ZNF622Q969S3 477 aaKnown RBP eCLIP16.07■□□□□ 0.16
AC004540.1-205ENST00000420774 API5Q9BZZ5 524 aaKnown RBP16.07■□□□□ 0.16
AC004540.1-205ENST00000420774 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
AC004540.1-205ENST00000420774 ABCC4O15439 1325 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 H7C1W4 665 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 CASP7P55210 303 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 CRY2Q49AN0 593 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 ZKSCAN2Q63HK3 967 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 ARHGAP45Q92619 1136 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 NLRP3Q96P20 1036 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
AC004540.1-205ENST00000420774 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 PLIN1O60240 522 aa16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 SLC51AQ86UW1 340 aa16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 MASTLQ96GX5 879 aa16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 PIM2Q9P1W9 311 aa16.05■□□□□ 0.16
AC004540.1-205ENST00000420774 GRM8O00222 908 aa16.04■□□□□ 0.16
AC004540.1-205ENST00000420774 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
AC004540.1-205ENST00000420774 NBPF7P0C2Y1 421 aaPredicted RBP16.04■□□□□ 0.16
AC004540.1-205ENST00000420774 NPR1P16066 1061 aa16.04■□□□□ 0.16
AC004540.1-205ENST00000420774 GPR162Q16538 588 aa16.04■□□□□ 0.16
AC004540.1-205ENST00000420774 RPGRQ92834 1020 aaKnown RBP16.04■□□□□ 0.16
AC004540.1-205ENST00000420774 C9orf78Q9NZ63 289 aaPredicted RBP16.04■□□□□ 0.16
AC004540.1-205ENST00000420774 RLBP1P12271 317 aa16.03■□□□□ 0.16
AC004540.1-205ENST00000420774 DALRD3Q5D0E6 543 aaKnown RBP16.03■□□□□ 0.16
AC004540.1-205ENST00000420774 STYK1Q6J9G0 422 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms