RNA–Protein interactions for RNA: ENST00000420638.2

NBEAP3-201, Transcript of neurobeachin pseudogene 3, humanhuman

BASIC

Gene NBEAP3, Length 1,493 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBEAP3-201ENST00000420638 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
NBEAP3-201ENST00000420638 LMNB1P20700 586 aa16.1■□□□□ 0.17
NBEAP3-201ENST00000420638 ALDH1B1P30837 517 aa16.1■□□□□ 0.17
NBEAP3-201ENST00000420638 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
NBEAP3-201ENST00000420638 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
NBEAP3-201ENST00000420638 RNF181Q9P0P0 153 aa16.1■□□□□ 0.17
NBEAP3-201ENST00000420638 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
NBEAP3-201ENST00000420638 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
NBEAP3-201ENST00000420638 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
NBEAP3-201ENST00000420638 RASSF7Q02833 373 aa16.09■□□□□ 0.17
NBEAP3-201ENST00000420638 CRY2Q49AN0 593 aa16.09■□□□□ 0.17
NBEAP3-201ENST00000420638 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
NBEAP3-201ENST00000420638 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
NBEAP3-201ENST00000420638 UTP14AQ9BVJ6 771 aaKnown RBP16.09■□□□□ 0.17
NBEAP3-201ENST00000420638 NFKBIEO00221 500 aa16.08■□□□□ 0.16
NBEAP3-201ENST00000420638 NLRP10Q86W26 655 aa16.08■□□□□ 0.16
NBEAP3-201ENST00000420638 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.16
NBEAP3-201ENST00000420638 FER1L6Q2WGJ9 1857 aa16.07■□□□□ 0.16
NBEAP3-201ENST00000420638 SLC10A5Q5PT55 438 aa16.07■□□□□ 0.16
NBEAP3-201ENST00000420638 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
NBEAP3-201ENST00000420638 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
NBEAP3-201ENST00000420638 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
NBEAP3-201ENST00000420638 HOXA10P31260 410 aaPredicted RBP16.06■□□□□ 0.16
NBEAP3-201ENST00000420638 C1QTNF8P60827 252 aa16.06■□□□□ 0.16
NBEAP3-201ENST00000420638 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
NBEAP3-201ENST00000420638 NLRP3Q96P20 1036 aa16.06■□□□□ 0.16
NBEAP3-201ENST00000420638 PHAXQ9H814 394 aaKnown RBP16.06■□□□□ 0.16
NBEAP3-201ENST00000420638 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
NBEAP3-201ENST00000420638 LTBP3Q9NS15 1303 aa16.05■□□□□ 0.16
NBEAP3-201ENST00000420638 PRELPP51888 382 aa16.05■□□□□ 0.16
NBEAP3-201ENST00000420638 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
NBEAP3-201ENST00000420638 TWISTNBQ3B726 338 aaPredicted RBP16.05■□□□□ 0.16
NBEAP3-201ENST00000420638 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
NBEAP3-201ENST00000420638 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
NBEAP3-201ENST00000420638 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
NBEAP3-201ENST00000420638 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
NBEAP3-201ENST00000420638 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
NBEAP3-201ENST00000420638 TRIM28Q13263 835 aaKnown RBP16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 CRAMP1Q96RY5 1269 aa16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 KDM2BQ8NHM5 1336 aa16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 DDX58O95786 925 aaKnown RBP16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 MYH3P11055 1940 aa16.03■□□□□ 0.16
NBEAP3-201ENST00000420638 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 KIF3CO14782 793 aa16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 EXOSC9Q06265 439 aaKnown RBP16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 CC2D2BQ6DHV5 1058 aa16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 SYNE4Q8N205 404 aa16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.15
NBEAP3-201ENST00000420638 HCLS1P14317 486 aaPredicted RBP16.01■□□□□ 0.15
NBEAP3-201ENST00000420638 SLFN5Q08AF3 891 aa16.01■□□□□ 0.15
NBEAP3-201ENST00000420638 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
NBEAP3-201ENST00000420638 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
NBEAP3-201ENST00000420638 FKBP4Q02790 459 aaKnown RBP eCLIP16■□□□□ 0.15
NBEAP3-201ENST00000420638 OLFM4Q6UX06 510 aa16■□□□□ 0.15
NBEAP3-201ENST00000420638 FAM89AQ96GI7 184 aa16■□□□□ 0.15
NBEAP3-201ENST00000420638 NMRK2Q9NPI5 230 aa16■□□□□ 0.15
NBEAP3-201ENST00000420638 GLTPD2A6NH11 291 aa15.99■□□□□ 0.15
NBEAP3-201ENST00000420638 E9PSI1 815 aa15.99■□□□□ 0.15
NBEAP3-201ENST00000420638 VAMP4O75379 141 aa15.99■□□□□ 0.15
NBEAP3-201ENST00000420638 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
NBEAP3-201ENST00000420638 GRIPAP1Q4V328 841 aa15.99■□□□□ 0.15
NBEAP3-201ENST00000420638 MYD88Q99836 296 aa15.99■□□□□ 0.15
NBEAP3-201ENST00000420638 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
NBEAP3-201ENST00000420638 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
NBEAP3-201ENST00000420638 KSR2Q6VAB6 950 aa15.98■□□□□ 0.15
NBEAP3-201ENST00000420638 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
NBEAP3-201ENST00000420638 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
NBEAP3-201ENST00000420638 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
NBEAP3-201ENST00000420638 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 TOMM70O94826 608 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 PSMD1Q99460 953 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 MAP3K2Q9Y2U5 619 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 SNED1Q8TER0 1413 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 TAF1P21675 1872 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 ABCC4O15439 1325 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 ZBED9Q6R2W3 1325 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 BBOX1O75936 387 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 HSP90B1P14625 803 aaKnown RBP15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 RRAGCQ9HB90 399 aa15.97■□□□□ 0.15
NBEAP3-201ENST00000420638 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.14
NBEAP3-201ENST00000420638 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.14
NBEAP3-201ENST00000420638 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.14
NBEAP3-201ENST00000420638 G2E3Q7L622 706 aa15.96■□□□□ 0.14
NBEAP3-201ENST00000420638 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.14
NBEAP3-201ENST00000420638 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.14
NBEAP3-201ENST00000420638 ATP6V0A2Q9Y487 856 aa15.96■□□□□ 0.14
NBEAP3-201ENST00000420638 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 539.3 ms