RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 PHAXQ9H814 394 aaKnown RBP8.75□□□□□ -1.01
CPS1-202ENST00000417946 RGPD3A6NKT7 1758 aaPredicted RBP8.74□□□□□ -1.01
CPS1-202ENST00000417946 RGPD4Q7Z3J3 1758 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 A0A0G2JS52 829 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 KIF3CO14782 793 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 PTCD1O75127 700 aaKnown RBP8.74□□□□□ -1.01
CPS1-202ENST00000417946 EIF2S2P20042 333 aaKnown RBP8.74□□□□□ -1.01
CPS1-202ENST00000417946 MYT1Q01538 1121 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 FLIIQ13045 1269 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 ITPK1Q13572 414 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 KRT27Q7Z3Y8 459 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 VSIG10Q8N0Z9 540 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 TMEM57Q8N5G2 664 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 CLUAP1Q96AJ1 413 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 DDX21Q9NR30 783 aaKnown RBP eCLIP8.74□□□□□ -1.01
CPS1-202ENST00000417946 ERBB4Q15303 1308 aa8.74□□□□□ -1.01
CPS1-202ENST00000417946 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
CPS1-202ENST00000417946 PSDA5PKW4 1024 aaPredicted RBP8.73□□□□□ -1.01
CPS1-202ENST00000417946 NEFLP07196 543 aa8.73□□□□□ -1.01
CPS1-202ENST00000417946 PIP4K2AP48426 406 aaPredicted RBP8.73□□□□□ -1.01
CPS1-202ENST00000417946 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
CPS1-202ENST00000417946 DZIP1LQ8IYY4 767 aaKnown RBP8.73□□□□□ -1.01
CPS1-202ENST00000417946 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.73□□□□□ -1.01
CPS1-202ENST00000417946 SYTL4Q96C24 671 aaPredicted RBP8.73□□□□□ -1.01
CPS1-202ENST00000417946 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
CPS1-202ENST00000417946 PTPRCP08575 1304 aa8.73□□□□□ -1.01
CPS1-202ENST00000417946 ATP10DQ9P241 1426 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 ANKRD36CQ5JPF3 1778 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 F6X3S4 739 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 A1BGP04217 495 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 CYP19A1P11511 503 aaPredicted RBP8.72□□□□□ -1.01
CPS1-202ENST00000417946 PBX2P40425 430 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 MVPQ14764 893 aaKnown RBP8.72□□□□□ -1.01
CPS1-202ENST00000417946 INTS3Q68E01 1043 aaKnown RBP8.72□□□□□ -1.01
CPS1-202ENST00000417946 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 STK31Q9BXU1 1019 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 API5Q9BZZ5 524 aaKnown RBP8.72□□□□□ -1.01
CPS1-202ENST00000417946 DBF4Q9UBU7 674 aaPredicted RBP8.72□□□□□ -1.01
CPS1-202ENST00000417946 TUBGCP6Q96RT7 1819 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 SCN7AQ01118 1682 aa8.72□□□□□ -1.01
CPS1-202ENST00000417946 C4AP0C0L4 1744 aa8.71□□□□□ -1.01
CPS1-202ENST00000417946 C4BP0C0L5 1744 aa8.71□□□□□ -1.01
CPS1-202ENST00000417946 EP400Q96L91 3159 aa8.71□□□□□ -1.01
CPS1-202ENST00000417946 AFDNP55196 1824 aaKnown RBP8.71□□□□□ -1.01
CPS1-202ENST00000417946 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.02
CPS1-202ENST00000417946 IPO8O15397 1037 aaKnown RBP8.71□□□□□ -1.02
CPS1-202ENST00000417946 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.02
CPS1-202ENST00000417946 SIK1P57059 783 aa8.71□□□□□ -1.02
CPS1-202ENST00000417946 HS6ST3Q8IZP7 471 aa8.71□□□□□ -1.02
CPS1-202ENST00000417946 NUP98P52948 1817 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 TBC1D12O60347 775 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 NUDT7P0C024 238 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 INTS5Q6P9B9 1019 aaKnown RBP8.7□□□□□ -1.02
CPS1-202ENST00000417946 FAM196AQ6ZSG2 479 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 XAGE3Q8WTP9 111 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 SMARCC1Q92922 1105 aaPredicted RBP8.7□□□□□ -1.02
CPS1-202ENST00000417946 HYPKQ9NX55 129 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 ZBTB1Q9Y2K1 713 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
CPS1-202ENST00000417946 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
CPS1-202ENST00000417946 MYL6BP14649 208 aa8.69□□□□□ -1.02
CPS1-202ENST00000417946 KCNQ4P56696 695 aa8.69□□□□□ -1.02
CPS1-202ENST00000417946 FKBP5Q13451 457 aaPredicted RBP8.69□□□□□ -1.02
CPS1-202ENST00000417946 TTLL7Q6ZT98 887 aa8.69□□□□□ -1.02
CPS1-202ENST00000417946 ZBTB40Q9NUA8 1239 aa8.69□□□□□ -1.02
CPS1-202ENST00000417946 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
CPS1-202ENST00000417946 IBTKQ9P2D0 1353 aaPredicted RBP8.69□□□□□ -1.02
CPS1-202ENST00000417946 PI4KAP2A4QPH2 592 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 TRIM37O94972 964 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 BEND3Q5T5X7 828 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 KSR2Q6VAB6 950 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 COPS6Q7L5N1 327 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 AMIGO3Q86WK7 504 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 ITPRIPQ8IWB1 547 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 FTSJ3Q8IY81 847 aaKnown RBP8.68□□□□□ -1.02
CPS1-202ENST00000417946 PI4KAP1Q8N8J0 262 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.026e-8■■■■■ 28.3
CPS1-202ENST00000417946 TEX13AQ9BXU3 409 aaPredicted RBP8.68□□□□□ -1.02
CPS1-202ENST00000417946 LRRC4BQ9NT99 713 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 PCDHB15Q9Y5E8 787 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 KDM2BQ8NHM5 1336 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 CNTNAP4Q9C0A0 1308 aa8.68□□□□□ -1.02
CPS1-202ENST00000417946 IGKV5-2P06315 115 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 MS4A1P11836 297 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 CRKLP46109 303 aaKnown RBP8.67□□□□□ -1.02
CPS1-202ENST00000417946 EIF5P55010 431 aaKnown RBP8.67□□□□□ -1.02
CPS1-202ENST00000417946 COL24A1Q17RW2 1714 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 B4GALNT3Q6L9W6 998 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 DNAAF4Q8WXU2 420 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 MEIS3Q99687 375 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 CHMP4AQ9BY43 222 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 MAP3K2Q9Y2U5 619 aa8.67□□□□□ -1.02
CPS1-202ENST00000417946 STARD3NLO95772 234 aa8.66□□□□□ -1.02
CPS1-202ENST00000417946 CCT4P50991 539 aaKnown RBP8.66□□□□□ -1.02
CPS1-202ENST00000417946 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms