RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 LRRFIP2Q9Y608 721 aaKnown RBP6.92□□□□□ -1.3
HDAC9-203ENST00000406072 CCP110O43303 1012 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 MVPQ14764 893 aaKnown RBP6.91□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC91Q7Z6B0 441 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 ZNF397Q8NF99 534 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-203ENST00000406072 ORAI2Q96SN7 254 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 NAT10Q9H0A0 1025 aaKnown RBP6.91□□□□□ -1.3
HDAC9-203ENST00000406072 TPM1P09493 284 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 CAMK4Q16566 473 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 KRBA2Q6ZNG9 492 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 C1orf115Q9H7X2 142 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 PES1O00541 588 aaKnown RBP6.91□□□□□ -1.3
HDAC9-203ENST00000406072 NFE2L2Q16236 605 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 DUSP27Q5VZP5 1158 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC186Q7Z3E2 898 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 TCP11L2Q8N4U5 519 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 MYCBPQ99417 103 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-203ENST00000406072 NUP62CLQ9H1M0 184 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 CLIP2Q9UDT6 1046 aa6.91□□□□□ -1.3
HDAC9-203ENST00000406072 PXDNLA1KZ92 1463 aa6.9□□□□□ -1.3
HDAC9-203ENST00000406072 PIBF1Q8WXW3 757 aa6.9□□□□□ -1.3
HDAC9-203ENST00000406072 A0A1B0GUL7 405 aa6.9□□□□□ -1.31
HDAC9-203ENST00000406072 ZKSCAN1P17029 563 aaPredicted RBP6.9□□□□□ -1.31
HDAC9-203ENST00000406072 MAP3K11Q16584 847 aa6.9□□□□□ -1.31
HDAC9-203ENST00000406072 TSR1Q2NL82 804 aaKnown RBP6.9□□□□□ -1.31
HDAC9-203ENST00000406072 GCP02774 474 aa6.9□□□□□ -1.31
HDAC9-203ENST00000406072 TICAM2Q86XR7 235 aa6.9□□□□□ -1.31
HDAC9-203ENST00000406072 SMC5Q8IY18 1101 aa6.9□□□□□ -1.31
HDAC9-203ENST00000406072 RBM42Q9BTD8 480 aaKnown RBP6.9□□□□□ -1.31
HDAC9-203ENST00000406072 TRIM35Q9UPQ4 493 aa6.9□□□□□ -1.31
HDAC9-203ENST00000406072 EMILIN1Q9Y6C2 1016 aa6.9□□□□□ -1.31
HDAC9-203ENST00000406072 SOX12O15370 315 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 KINO60870 393 aaKnown RBP6.89□□□□□ -1.31
HDAC9-203ENST00000406072 CAPN2P17655 700 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.31
HDAC9-203ENST00000406072 MICALL1Q8N3F8 863 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 ANKRD20A12PQ8NF67 263 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 GCC1Q96CN9 775 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 ERBB3P21860 1342 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 HEG1Q9ULI3 1381 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 IVLP07476 585 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 ABTB2Q8N961 1025 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 GAS2L2Q8NHY3 880 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 CCDC34Q96HJ3 373 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 FAM107BQ9H098 131 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 ZRANB1Q9UGI0 708 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 PRDM4Q9UKN5 801 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 NHSQ6T4R5 1651 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 TMPOP42166 694 aaKnown RBP6.89□□□□□ -1.31
HDAC9-203ENST00000406072 FOSBP53539 338 aa6.89□□□□□ -1.31
HDAC9-203ENST00000406072 KRT85P78386 507 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 SNX21Q969T3 373 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 DDX11Q96FC9 970 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 TNS2Q63HR2 1409 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 ERC2O15083 957 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 IPO7O95373 1038 aaKnown RBP6.88□□□□□ -1.31
HDAC9-203ENST00000406072 SLU7O95391 586 aaKnown RBP6.88□□□□□ -1.31
HDAC9-203ENST00000406072 NLRP6P59044 892 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 CEBPZQ03701 1054 aaKnown RBP6.88□□□□□ -1.31
HDAC9-203ENST00000406072 EXOSC9Q06265 439 aaKnown RBP6.88□□□□□ -1.31
HDAC9-203ENST00000406072 GIMAP6Q6P9H5 292 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 CKAP2LQ8IYA6 745 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 SFPQP23246 707 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC9-203ENST00000406072 SSR1P43307 286 aaKnown RBP6.88□□□□□ -1.31
HDAC9-203ENST00000406072 ZNF445P59923 1031 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 LRRCC1Q9C099 1032 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 NOB1Q9ULX3 412 aaKnown RBP6.88□□□□□ -1.31
HDAC9-203ENST00000406072 C5P01031 1676 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 MAP3K5Q99683 1374 aa6.88□□□□□ -1.31
HDAC9-203ENST00000406072 SHTN1A0MZ66 631 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 AMOTQ4VCS5 1084 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 PCDHB15Q9Y5E8 787 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 SPATA31A6Q5VVP1 1343 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 RGS12O14924 1447 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 NUP188Q5SRE5 1749 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 NF2P35240 595 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 SNW1Q13573 536 aaKnown RBP6.87□□□□□ -1.31
HDAC9-203ENST00000406072 JAKMIP3Q5VZ66 844 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 ATF7IPQ6VMQ6 1270 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 TSR2Q969E8 191 aaKnown RBP6.87□□□□□ -1.31
HDAC9-203ENST00000406072 LRRC59Q96AG4 307 aaKnown RBP6.87□□□□□ -1.31
HDAC9-203ENST00000406072 UPF3BQ9BZI7 483 aaKnown RBP6.87□□□□□ -1.31
HDAC9-203ENST00000406072 ARFGAP3Q9NP61 516 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 COL5A3P25940 1745 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-203ENST00000406072 PTGS1P23219 599 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 SARNPP82979 210 aaKnown RBP6.87□□□□□ -1.31
HDAC9-203ENST00000406072 DCTN1Q14203 1278 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 MCM6Q14566 821 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 ARHGAP29Q52LW3 1261 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 API5Q9BZZ5 524 aaKnown RBP6.87□□□□□ -1.31
HDAC9-203ENST00000406072 ITGB4P16144 1822 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 MEGF6O75095 1541 aa6.87□□□□□ -1.31
HDAC9-203ENST00000406072 SERPINC1P01008 464 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 ZSCAN20P17040 1043 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 PDCP20941 246 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 ALDH1L2Q3SY69 923 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 CAGE1Q8TC20 777 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 DYDC1Q8WWB3 177 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 WDR17Q8IZU2 1322 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms