RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 LUC7L3O95232 432 aaKnown RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 BMP15O95972 392 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 U3KPZ7 1027 aaPredicted RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 TWISTNBQ3B726 338 aaPredicted RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 SAMD15Q9P1V8 674 aa9.56□□□□□ -0.88
CHD8-201ENST00000399982 GLRX3O76003 335 aaKnown RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 NUP88Q99567 741 aaPredicted RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 IQCGQ9H095 443 aaKnown RBP9.56□□□□□ -0.88
CHD8-201ENST00000399982 SLC8A1P32418 973 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 GBP1P32455 592 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 KRT83P78385 493 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 SETDB1Q15047 1291 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 LRCH2Q5VUJ6 765 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 SPINK5Q9NQ38 1064 aaPredicted RBP9.55□□□□□ -0.88
CHD8-201ENST00000399982 INPP5BP32019 993 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 SPTY2D1Q68D10 685 aaPredicted RBP9.55□□□□□ -0.88
CHD8-201ENST00000399982 JAKMIP1Q96N16 626 aaKnown RBP9.55□□□□□ -0.88
CHD8-201ENST00000399982 SELENOOQ9BVL4 669 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 ATP5DP30049 168 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 HNRNPMP52272 730 aaKnown RBP eCLIP9.55□□□□□ -0.88
CHD8-201ENST00000399982 ATL3Q6DD88 541 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 TMC6Q7Z403 805 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 LRRC27Q9C0I9 530 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 NOB1Q9ULX3 412 aaKnown RBP9.55□□□□□ -0.88
CHD8-201ENST00000399982 MAP4K4O95819 1239 aaPredicted RBP9.55□□□□□ -0.88
CHD8-201ENST00000399982 SMC5Q8IY18 1101 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 RAB34Q9BZG1 259 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 BRD2P25440 801 aaKnown RBP9.55□□□□□ -0.88
CHD8-201ENST00000399982 STX6O43752 255 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 MYO1BO43795 1136 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
CHD8-201ENST00000399982 ALDH3A1P30838 453 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 ACTN2P35609 894 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 HOMEZQ8IX15 550 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 HYPKQ9NX55 129 aa9.55□□□□□ -0.88
CHD8-201ENST00000399982 CLNS1AP54105 237 aaKnown RBP9.54□□□□□ -0.88
CHD8-201ENST00000399982 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 SEC63Q9UGP8 760 aaKnown RBP9.54□□□□□ -0.88
CHD8-201ENST00000399982 SSFA2P28290 1259 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 VAV2P52735 878 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 KLHL10Q6JEL2 608 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 VTI1AQ96AJ9 217 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 CDCA7LQ96GN5 454 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 SYNCQ9H7C4 482 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 RMND1Q9NWS8 449 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 HMG20BQ9P0W2 317 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 FHOD3Q2V2M9 1422 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 TDRD12Q587J7 1177 aaKnown RBP9.54□□□□□ -0.88
CHD8-201ENST00000399982 ATRIPQ8WXE1 791 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 ELP1O95163 1332 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 ATP8B1O43520 1251 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 CCDC40Q4G0X9 1142 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 TACO1Q9BSH4 297 aaKnown RBP9.54□□□□□ -0.88
CHD8-201ENST00000399982 WHAMMP3Q1A5X7 153 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 AFAP1L1Q8TED9 768 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 VCX3BQ9H321 246 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
CHD8-201ENST00000399982 PRR16Q569H4 304 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 EXOSC9Q06265 439 aaKnown RBP9.53□□□□□ -0.88
CHD8-201ENST00000399982 KRBA2Q6ZNG9 492 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 LMBR1Q8WVP7 490 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 ATP6V1E1P36543 226 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 MAP7Q14244 749 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 ARHGAP24Q8N264 748 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 KRT86O43790 486 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 BUB1BO60566 1050 aaPredicted RBP9.53□□□□□ -0.88
CHD8-201ENST00000399982 BIRC2Q13490 618 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 RAB3GAP1Q15042 981 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 INTS4Q96HW7 963 aaKnown RBP9.53□□□□□ -0.88
CHD8-201ENST00000399982 MMRN2Q9H8L6 949 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 SPATS2LQ9NUQ6 558 aaKnown RBP9.53□□□□□ -0.88
CHD8-201ENST00000399982 PRC1O43663 620 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
CHD8-201ENST00000399982 AMPD3Q01432 767 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 CUL4BQ13620 913 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 ANKRD30BQ9BXX2 1392 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 CRCPO75575 148 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 JAKMIP2Q96AA8 810 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 RPGRIP1Q96KN7 1286 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 TSGA10Q9BZW7 698 aa9.53□□□□□ -0.88
CHD8-201ENST00000399982 DMTNQ08495 405 aa9.52□□□□□ -0.88
CHD8-201ENST00000399982 CETN1Q12798 172 aa9.52□□□□□ -0.88
CHD8-201ENST00000399982 MCM6Q14566 821 aa9.52□□□□□ -0.88
CHD8-201ENST00000399982 PHLDB2Q86SQ0 1253 aa9.52□□□□□ -0.88
CHD8-201ENST00000399982 ZMYM3Q14202 1370 aa9.52□□□□□ -0.88
CHD8-201ENST00000399982 CLUL1Q15846 466 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 CCT6BQ92526 530 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.89
CHD8-201ENST00000399982 FKBP4Q02790 459 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHD8-201ENST00000399982 UBAC1Q9BSL1 405 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 RFX1P22670 979 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 KIAA0753Q2KHM9 967 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 ZNF365Q70YC5 407 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 CPLX4Q7Z7G2 160 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 HAUS7Q99871 368 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 VPS18Q9P253 973 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 ANKFY1Q9P2R3 1169 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
CHD8-201ENST00000399982 GEN1Q17RS7 908 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms