RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 SIL1Q9H173 461 aa16.61■□□□□ 0.25
CCDC57-203ENST00000392343 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
CCDC57-203ENST00000392343 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
CCDC57-203ENST00000392343 FOSBP53539 338 aa16.6■□□□□ 0.25
CCDC57-203ENST00000392343 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
CCDC57-203ENST00000392343 DNAJC25Q9H1X3 360 aa16.6■□□□□ 0.25
CCDC57-203ENST00000392343 TLR7Q9NYK1 1049 aaKnown RBP16.6■□□□□ 0.25
CCDC57-203ENST00000392343 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
CCDC57-203ENST00000392343 NR1I2O75469 434 aa16.6■□□□□ 0.25
CCDC57-203ENST00000392343 ZNF592Q92610 1267 aa16.6■□□□□ 0.25
CCDC57-203ENST00000392343 A0A087WWV3 80 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 SLC27A2O14975 620 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
CCDC57-203ENST00000392343 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 BICD2Q8TD16 824 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
CCDC57-203ENST00000392343 PRAMEF22A3QJZ6 481 aa16.58■□□□□ 0.25
CCDC57-203ENST00000392343 PPFIA3O75145 1194 aa16.58■□□□□ 0.25
CCDC57-203ENST00000392343 ABTB2Q8N961 1025 aa16.58■□□□□ 0.25
CCDC57-203ENST00000392343 TTC21AQ8NDW8 1320 aa16.58■□□□□ 0.24
CCDC57-203ENST00000392343 JAK2O60674 1132 aa16.58■□□□□ 0.24
CCDC57-203ENST00000392343 MPRIPQ6WCQ1 1025 aa16.58■□□□□ 0.24
CCDC57-203ENST00000392343 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
CCDC57-203ENST00000392343 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
CCDC57-203ENST00000392343 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
CCDC57-203ENST00000392343 NALCNQ8IZF0 1738 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 TPM3P06753 285 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 TNNT1P13805 278 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 ARID5BQ14865 1188 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 EAF2Q96CJ1 260 aaPredicted RBP16.57■□□□□ 0.24
CCDC57-203ENST00000392343 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 NDUFB9Q9Y6M9 179 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 CHGBP05060 677 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 AIMP1Q12904 312 aaKnown RBP16.57■□□□□ 0.24
CCDC57-203ENST00000392343 LEO1Q8WVC0 666 aaPredicted RBP16.57■□□□□ 0.24
CCDC57-203ENST00000392343 ANKRD7Q92527 254 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 MAP4K1Q92918 833 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 ADCY9O60503 1353 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 TMEM2Q9UHN6 1383 aa16.57■□□□□ 0.24
CCDC57-203ENST00000392343 ZNF165P49910 485 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 NCBP1Q09161 790 aaKnown RBP16.56■□□□□ 0.24
CCDC57-203ENST00000392343 CCDC144BQ3MJ40 725 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 GPATCH3Q96I76 525 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 FSD1Q9BTV5 496 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 ZNF75DP51815 510 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-203ENST00000392343 CACTINQ8WUQ7 758 aaKnown RBP16.56■□□□□ 0.24
CCDC57-203ENST00000392343 FBXW7Q969H0 707 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 PGBD1Q96JS3 809 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 SASH1O94885 1247 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 TOB2Q14106 344 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-203ENST00000392343 CLIP2Q9UDT6 1046 aa16.56■□□□□ 0.24
CCDC57-203ENST00000392343 PXDNLA1KZ92 1463 aa16.55■□□□□ 0.24
CCDC57-203ENST00000392343 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
CCDC57-203ENST00000392343 CTIFO43310 598 aaKnown RBP16.55■□□□□ 0.24
CCDC57-203ENST00000392343 TPD52L1Q16890 204 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-203ENST00000392343 UTP14CQ5TAP6 766 aaKnown RBP16.55■□□□□ 0.24
CCDC57-203ENST00000392343 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
CCDC57-203ENST00000392343 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
CCDC57-203ENST00000392343 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
CCDC57-203ENST00000392343 CEBPAP49715 358 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-203ENST00000392343 CACNA1FO60840 1977 aa16.55■□□□□ 0.24
CCDC57-203ENST00000392343 TEFQ10587 303 aa16.54■□□□□ 0.24
CCDC57-203ENST00000392343 NBPF6Q5VWK0 638 aa16.54■□□□□ 0.24
CCDC57-203ENST00000392343 KCNB2Q92953 911 aa16.54■□□□□ 0.24
CCDC57-203ENST00000392343 NBPF4Q96M43 638 aa16.54■□□□□ 0.24
CCDC57-203ENST00000392343 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC57-203ENST00000392343 V9GYY5 206 aaPredicted RBP16.54■□□□□ 0.24
CCDC57-203ENST00000392343 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
CCDC57-203ENST00000392343 RGPD8O14715 1765 aaPredicted RBP16.54■□□□□ 0.24
CCDC57-203ENST00000392343 PSMA5P28066 241 aa16.53■□□□□ 0.24
CCDC57-203ENST00000392343 ERCC4Q92889 916 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-203ENST00000392343 SUCLG2Q96I99 432 aa16.53■□□□□ 0.24
CCDC57-203ENST00000392343 FTOQ9C0B1 505 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC57-203ENST00000392343 SCAND2PQ9GZW5 306 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-203ENST00000392343 TNRQ92752 1358 aa16.53■□□□□ 0.24
CCDC57-203ENST00000392343 PDCP20941 246 aa16.53■□□□□ 0.24
CCDC57-203ENST00000392343 RPS6KB1P23443 525 aa16.53■□□□□ 0.24
CCDC57-203ENST00000392343 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
CCDC57-203ENST00000392343 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
CCDC57-203ENST00000392343 CLSTN2Q9H4D0 955 aa16.53■□□□□ 0.24
CCDC57-203ENST00000392343 USP27XA6NNY8 438 aa16.52■□□□□ 0.24
CCDC57-203ENST00000392343 G3BP1Q13283 466 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC57-203ENST00000392343 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.24
CCDC57-203ENST00000392343 BRF1Q92994 677 aa16.52■□□□□ 0.24
CCDC57-203ENST00000392343 ELP1O95163 1332 aa16.52■□□□□ 0.24
CCDC57-203ENST00000392343 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
CCDC57-203ENST00000392343 TOPAZ1Q8N9V7 1692 aa16.52■□□□□ 0.23
CCDC57-203ENST00000392343 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.23
CCDC57-203ENST00000392343 CCDC129Q6ZRS4 1044 aa16.52■□□□□ 0.23
CCDC57-203ENST00000392343 RBM33Q96EV2 1170 aaKnown RBP16.52■□□□□ 0.23
CCDC57-203ENST00000392343 KAZALD1Q96I82 304 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms