RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 LMBR1LQ6UX01 489 aa23.87■■□□□ 1.41
HDAC1-201ENST00000373548 CCDC8Q9H0W5 538 aaPredicted RBP23.87■■□□□ 1.41
HDAC1-201ENST00000373548 ZNF330Q9Y3S2 320 aaPredicted RBP23.87■■□□□ 1.41
HDAC1-201ENST00000373548 SYTL4Q96C24 671 aaPredicted RBP23.86■■□□□ 1.41
HDAC1-201ENST00000373548 ISCA1Q9BUE6 129 aa23.86■■□□□ 1.41
HDAC1-201ENST00000373548 TLR7Q9NYK1 1049 aaKnown RBP23.86■■□□□ 1.41
HDAC1-201ENST00000373548 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
HDAC1-201ENST00000373548 SLIT2O94813 1529 aa23.85■■□□□ 1.41
HDAC1-201ENST00000373548 SPATA31A5Q5VU36 1347 aa23.84■■□□□ 1.41
HDAC1-201ENST00000373548 SPATA31A7Q8IWB4 1347 aa23.84■■□□□ 1.41
HDAC1-201ENST00000373548 TCIRG1Q13488 830 aa23.84■■□□□ 1.41
HDAC1-201ENST00000373548 DDB1Q16531 1140 aa23.84■■□□□ 1.41
HDAC1-201ENST00000373548 SGSM2O43147 1006 aa23.84■■□□□ 1.41
HDAC1-201ENST00000373548 CYP19A1P11511 503 aaPredicted RBP23.84■■□□□ 1.41
HDAC1-201ENST00000373548 KIF6Q6ZMV9 814 aa23.83■■□□□ 1.41
HDAC1-201ENST00000373548 EPB41L2O43491 1005 aaKnown RBP23.83■■□□□ 1.4
HDAC1-201ENST00000373548 MCCP23508 829 aa23.83■■□□□ 1.4
HDAC1-201ENST00000373548 PALD1Q9ULE6 856 aa23.82■■□□□ 1.4
HDAC1-201ENST00000373548 TFCP2Q12800 502 aa23.81■■□□□ 1.4
HDAC1-201ENST00000373548 TRIM28Q13263 835 aaKnown RBP23.81■■□□□ 1.4
HDAC1-201ENST00000373548 EVI5LQ96CN4 794 aa23.81■■□□□ 1.4
HDAC1-201ENST00000373548 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
HDAC1-201ENST00000373548 ST18O60284 1047 aa23.8■■□□□ 1.4
HDAC1-201ENST00000373548 HSP90AA1P07900 732 aaKnown RBP23.8■■□□□ 1.4
HDAC1-201ENST00000373548 ANAPC15P60006 121 aa23.8■■□□□ 1.4
HDAC1-201ENST00000373548 TNNI3KQ59H18 835 aa23.8■■□□□ 1.4
HDAC1-201ENST00000373548 FPGT-TNNI3KV9GXZ4 949 aa23.8■■□□□ 1.4
HDAC1-201ENST00000373548 MAP3K15Q6ZN16 1313 aa23.8■■□□□ 1.4
HDAC1-201ENST00000373548 DEKP35659 375 aaKnown RBP23.8■■□□□ 1.4
HDAC1-201ENST00000373548 MARCH10Q8NA82 808 aaPredicted RBP23.8■■□□□ 1.4
HDAC1-201ENST00000373548 IL17RAQ96F46 866 aa23.8■■□□□ 1.4
HDAC1-201ENST00000373548 CWC27Q6UX04 472 aaKnown RBP23.79■■□□□ 1.4
HDAC1-201ENST00000373548 FOXD4L1Q9NU39 408 aa23.79■■□□□ 1.4
HDAC1-201ENST00000373548 CIZ1Q9ULV3 898 aaPredicted RBP23.79■■□□□ 1.4
HDAC1-201ENST00000373548 BARGINQ6ZT62 677 aa23.78■■□□□ 1.4
HDAC1-201ENST00000373548 DIAPH3Q9NSV4 1193 aa23.78■■□□□ 1.4
HDAC1-201ENST00000373548 ZBTB1Q9Y2K1 713 aa23.78■■□□□ 1.4
HDAC1-201ENST00000373548 RAD50Q92878 1312 aa23.78■■□□□ 1.4
HDAC1-201ENST00000373548 LSG1Q9H089 658 aaKnown RBP23.78■■□□□ 1.4
HDAC1-201ENST00000373548 DBNLQ9UJU6 430 aaKnown RBP23.78■■□□□ 1.4
HDAC1-201ENST00000373548 CCDC9Q9Y3X0 531 aaKnown RBP23.78■■□□□ 1.4
HDAC1-201ENST00000373548 ANKRD36CQ5JPF3 1778 aa23.78■■□□□ 1.4
HDAC1-201ENST00000373548 GIGYF2Q6Y7W6 1299 aaKnown RBP23.77■■□□□ 1.4
HDAC1-201ENST00000373548 UBAP1LF5GYI3 381 aa23.77■■□□□ 1.4
HDAC1-201ENST00000373548 HSPA4P34932 840 aa23.77■■□□□ 1.4
HDAC1-201ENST00000373548 ARXQ96QS3 562 aa23.77■■□□□ 1.4
HDAC1-201ENST00000373548 BOLA2Q9H3K6 86 aa23.77■■□□□ 1.4
HDAC1-201ENST00000373548 HLFQ16534 295 aa23.76■■□□□ 1.39
HDAC1-201ENST00000373548 ATG9AQ7Z3C6 839 aa23.76■■□□□ 1.39
HDAC1-201ENST00000373548 PCCAP05165 728 aaPredicted RBP23.75■■□□□ 1.39
HDAC1-201ENST00000373548 RUFY2Q8WXA3 655 aa23.75■■□□□ 1.39
HDAC1-201ENST00000373548 ACSBG1Q96GR2 724 aa23.75■■□□□ 1.39
HDAC1-201ENST00000373548 NUP98P52948 1817 aa23.75■■□□□ 1.39
HDAC1-201ENST00000373548 NEK4P51957 841 aa23.75■■□□□ 1.39
HDAC1-201ENST00000373548 ATP5JP18859 108 aa23.74■■□□□ 1.39
HDAC1-201ENST00000373548 KIAA1211Q6ZU35 1233 aa23.73■■□□□ 1.39
HDAC1-201ENST00000373548 ZBTB38Q8NAP3 1195 aaPredicted RBP23.73■■□□□ 1.39
HDAC1-201ENST00000373548 FAM89AQ96GI7 184 aa23.73■■□□□ 1.39
HDAC1-201ENST00000373548 ZNF594Q96JF6 807 aaPredicted RBP23.73■■□□□ 1.39
HDAC1-201ENST00000373548 DBNDD2Q9BQY9 259 aa23.73■■□□□ 1.39
HDAC1-201ENST00000373548 A0A0G2JS52 829 aa23.72■■□□□ 1.39
HDAC1-201ENST00000373548 IL6STP40189 918 aaPredicted RBP23.72■■□□□ 1.39
HDAC1-201ENST00000373548 PLA2G12BQ9BX93 195 aa23.72■■□□□ 1.39
HDAC1-201ENST00000373548 EYA2O00167 538 aa23.72■■□□□ 1.39
HDAC1-201ENST00000373548 NLRP10Q86W26 655 aa23.72■■□□□ 1.39
HDAC1-201ENST00000373548 HIP1O00291 1037 aa23.71■■□□□ 1.39
HDAC1-201ENST00000373548 GPTP24298 496 aa23.71■■□□□ 1.39
HDAC1-201ENST00000373548 IL15P40933 162 aaPredicted RBP23.71■■□□□ 1.39
HDAC1-201ENST00000373548 HSP90AB3PQ58FF7 597 aa23.71■■□□□ 1.39
HDAC1-201ENST00000373548 MCM4P33991 863 aa23.71■■□□□ 1.39
HDAC1-201ENST00000373548 RAB3GAP1Q15042 981 aa23.71■■□□□ 1.39
HDAC1-201ENST00000373548 LRRC24Q50LG9 513 aa23.71■■□□□ 1.39
HDAC1-201ENST00000373548 CIAO1O76071 339 aa23.7■■□□□ 1.38
HDAC1-201ENST00000373548 NMIQ13287 307 aaPredicted RBP23.7■■□□□ 1.38
HDAC1-201ENST00000373548 FSD1Q9BTV5 496 aa23.7■■□□□ 1.38
HDAC1-201ENST00000373548 GPR108Q9NPR9 543 aa23.7■■□□□ 1.38
HDAC1-201ENST00000373548 CICQ96RK0 1608 aaPredicted RBP23.7■■□□□ 1.38
HDAC1-201ENST00000373548 CDHR2Q9BYE9 1310 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 FAM227BQ96M60 508 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 BCL9LQ86UU0 1499 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 JCADQ9P266 1359 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 RREB1Q92766 1687 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 ERVV-1B6SEH8 477 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 PTH1RQ03431 593 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 DZIP3Q86Y13 1208 aaKnown RBP23.69■■□□□ 1.38
HDAC1-201ENST00000373548 SYNE4Q8N205 404 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 EDC3Q96F86 508 aaKnown RBP23.69■■□□□ 1.38
HDAC1-201ENST00000373548 TBC1D2BQ9UPU7 963 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 SNX14Q9Y5W7 946 aa23.69■■□□□ 1.38
HDAC1-201ENST00000373548 CSF1RP07333 972 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 INTS5Q6P9B9 1019 aaKnown RBP23.68■■□□□ 1.38
HDAC1-201ENST00000373548 CERKQ8TCT0 537 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 TNPO1Q92973 898 aaKnown RBP23.68■■□□□ 1.38
HDAC1-201ENST00000373548 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 PUS3Q9BZE2 481 aaKnown RBP23.68■■□□□ 1.38
HDAC1-201ENST00000373548 LOC102724428A0A0B4J2F2 783 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 ATP6V1AP38606 617 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 MCM2P49736 904 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 SIK1P57059 783 aa23.68■■□□□ 1.38
HDAC1-201ENST00000373548 CCDC57Q2TAC2 916 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms