RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 BEND3Q5T5X7 828 aa21.04■□□□□ 0.96
VPS26A-202ENST00000373382 ABTB2Q8N961 1025 aa21.04■□□□□ 0.96
VPS26A-202ENST00000373382 KLHDC4Q8TBB5 520 aa21.04■□□□□ 0.96
VPS26A-202ENST00000373382 NDUFB9Q9Y6M9 179 aa21.04■□□□□ 0.96
VPS26A-202ENST00000373382 H3BQV1 296 aa21.03■□□□□ 0.96
VPS26A-202ENST00000373382 ARID5BQ14865 1188 aa21.03■□□□□ 0.96
VPS26A-202ENST00000373382 IFFO2Q5TF58 517 aa21.03■□□□□ 0.96
VPS26A-202ENST00000373382 TRMT1Q9NXH9 659 aaKnown RBP21.03■□□□□ 0.96
VPS26A-202ENST00000373382 CCDC112Q8NEF3 446 aa21.03■□□□□ 0.96
VPS26A-202ENST00000373382 OVOS2A0A0J9YW53 1432 aa21.03■□□□□ 0.96
VPS26A-202ENST00000373382 OVOS2Q6IE36 1432 aa21.03■□□□□ 0.96
VPS26A-202ENST00000373382 GOLGA6L19H0YKK7 550 aa21.02■□□□□ 0.96
VPS26A-202ENST00000373382 MPRIPQ6WCQ1 1025 aa21.02■□□□□ 0.96
VPS26A-202ENST00000373382 MAP3K2Q9Y2U5 619 aa21.02■□□□□ 0.96
VPS26A-202ENST00000373382 SLC27A2O14975 620 aa21.02■□□□□ 0.96
VPS26A-202ENST00000373382 ERCC4Q92889 916 aaPredicted RBP21.02■□□□□ 0.96
VPS26A-202ENST00000373382 CEP170BQ9Y4F5 1589 aaPredicted RBP21.02■□□□□ 0.96
VPS26A-202ENST00000373382 SBNO1A3KN83 1393 aa21.02■□□□□ 0.96
VPS26A-202ENST00000373382 A0A0D9SFI3 127 aa21.02■□□□□ 0.95
VPS26A-202ENST00000373382 TLR7Q9NYK1 1049 aaKnown RBP21.02■□□□□ 0.95
VPS26A-202ENST00000373382 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.95
VPS26A-202ENST00000373382 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.02■□□□□ 0.95
VPS26A-202ENST00000373382 MAP3K5Q99683 1374 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 PDCP20941 246 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 NCBP1Q09161 790 aaKnown RBP21.01■□□□□ 0.95
VPS26A-202ENST00000373382 G3BP1Q13283 466 aaKnown RBP eCLIP21.01■□□□□ 0.95
VPS26A-202ENST00000373382 NECTIN1Q15223 517 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 ZSCAN25Q6NSZ9 544 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 PSMA5P28066 241 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 HOXC9P31274 260 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 ZNF75DP51815 510 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 CACTINQ8WUQ7 758 aaKnown RBP21.01■□□□□ 0.95
VPS26A-202ENST00000373382 LEO1Q8WVC0 666 aaPredicted RBP21.01■□□□□ 0.95
VPS26A-202ENST00000373382 IL17RAQ96F46 866 aa21.01■□□□□ 0.95
VPS26A-202ENST00000373382 EPB41L2O43491 1005 aaKnown RBP21■□□□□ 0.95
VPS26A-202ENST00000373382 EVI5LQ96CN4 794 aa21■□□□□ 0.95
VPS26A-202ENST00000373382 SCAND2PQ9GZW5 306 aaPredicted RBP21■□□□□ 0.95
VPS26A-202ENST00000373382 TTC41PQ6P2S7 1318 aa21■□□□□ 0.95
VPS26A-202ENST00000373382 CCDC144BQ3MJ40 725 aa20.99■□□□□ 0.95
VPS26A-202ENST00000373382 CCDC144CPQ8IYA2 1237 aa20.99■□□□□ 0.95
VPS26A-202ENST00000373382 BECN2A8MW95 431 aa20.99■□□□□ 0.95
VPS26A-202ENST00000373382 BTBD11A6QL63 1104 aa20.99■□□□□ 0.95
VPS26A-202ENST00000373382 UTP14CQ5TAP6 766 aaKnown RBP20.99■□□□□ 0.95
VPS26A-202ENST00000373382 RNF20Q5VTR2 975 aa20.99■□□□□ 0.95
VPS26A-202ENST00000373382 EAF2Q96CJ1 260 aaPredicted RBP20.99■□□□□ 0.95
VPS26A-202ENST00000373382 PROSER3Q2NL68 480 aa20.98■□□□□ 0.95
VPS26A-202ENST00000373382 SYTL4Q96C24 671 aaPredicted RBP20.98■□□□□ 0.95
VPS26A-202ENST00000373382 FTOQ9C0B1 505 aaKnown RBP eCLIP20.98■□□□□ 0.95
VPS26A-202ENST00000373382 AMOTL2Q9Y2J4 779 aa20.98■□□□□ 0.95
VPS26A-202ENST00000373382 PRAMEF22A3QJZ6 481 aa20.98■□□□□ 0.95
VPS26A-202ENST00000373382 HTATSF1O43719 755 aaKnown RBP20.98■□□□□ 0.95
VPS26A-202ENST00000373382 CHGBP05060 677 aa20.98■□□□□ 0.95
VPS26A-202ENST00000373382 LTKP29376 864 aa20.98■□□□□ 0.95
VPS26A-202ENST00000373382 EIF4A1P60842 406 aaKnown RBP20.98■□□□□ 0.95
VPS26A-202ENST00000373382 BRF1Q92994 677 aa20.98■□□□□ 0.95
VPS26A-202ENST00000373382 GTPBP4Q9BZE4 634 aaKnown RBP20.97■□□□□ 0.95
VPS26A-202ENST00000373382 ZNF589Q86UQ0 364 aaPredicted RBP20.97■□□□□ 0.95
VPS26A-202ENST00000373382 TM6SF1Q9BZW5 370 aa20.97■□□□□ 0.95
VPS26A-202ENST00000373382 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
VPS26A-202ENST00000373382 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
VPS26A-202ENST00000373382 GUCY1B3Q02153 619 aa20.97■□□□□ 0.95
VPS26A-202ENST00000373382 ANKRD7Q92527 254 aa20.97■□□□□ 0.95
VPS26A-202ENST00000373382 RBM33Q96EV2 1170 aaKnown RBP20.97■□□□□ 0.95
VPS26A-202ENST00000373382 PGBD1Q96JS3 809 aa20.97■□□□□ 0.95
VPS26A-202ENST00000373382 DDX19AQ9NUU7 478 aaKnown RBP20.97■□□□□ 0.95
VPS26A-202ENST00000373382 PEAK1Q9H792 1746 aa20.96■□□□□ 0.95
VPS26A-202ENST00000373382 USP27XA6NNY8 438 aa20.96■□□□□ 0.95
VPS26A-202ENST00000373382 CEP135Q66GS9 1140 aa20.95■□□□□ 0.94
VPS26A-202ENST00000373382 MAP4K1Q92918 833 aa20.95■□□□□ 0.94
VPS26A-202ENST00000373382 CLSTN2Q9H4D0 955 aa20.95■□□□□ 0.94
VPS26A-202ENST00000373382 CCDC129Q6ZRS4 1044 aa20.95■□□□□ 0.94
VPS26A-202ENST00000373382 SMTNL1A8MU46 457 aa20.95■□□□□ 0.94
VPS26A-202ENST00000373382 DNAJC2Q99543 621 aaKnown RBP20.95■□□□□ 0.94
VPS26A-202ENST00000373382 RIMBP3CA6NJZ7 1639 aa20.94■□□□□ 0.94
VPS26A-202ENST00000373382 RIMBP3BA6NNM3 1639 aa20.94■□□□□ 0.94
VPS26A-202ENST00000373382 RIMBP3Q9UFD9 1639 aa20.94■□□□□ 0.94
VPS26A-202ENST00000373382 KDRP35968 1356 aa20.94■□□□□ 0.94
VPS26A-202ENST00000373382 RPS6KB1P23443 525 aa20.94■□□□□ 0.94
VPS26A-202ENST00000373382 CEBPAP49715 358 aaPredicted RBP20.94■□□□□ 0.94
VPS26A-202ENST00000373382 ZNF530Q6P9A1 599 aaPredicted RBP20.94■□□□□ 0.94
VPS26A-202ENST00000373382 USP31Q70CQ4 1352 aa20.94■□□□□ 0.94
VPS26A-202ENST00000373382 CTIFO43310 598 aaKnown RBP20.94■□□□□ 0.94
VPS26A-202ENST00000373382 BICC1Q9H694 974 aaKnown RBP20.94■□□□□ 0.94
VPS26A-202ENST00000373382 TOB2Q14106 344 aaPredicted RBP20.93■□□□□ 0.94
VPS26A-202ENST00000373382 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
VPS26A-202ENST00000373382 C11orf57Q6ZUT1 292 aaPredicted RBP20.93■□□□□ 0.94
VPS26A-202ENST00000373382 LRRC59Q96AG4 307 aaKnown RBP20.93■□□□□ 0.94
VPS26A-202ENST00000373382 C3P01024 1663 aa20.93■□□□□ 0.94
VPS26A-202ENST00000373382 SUCLG2Q96I99 432 aa20.93■□□□□ 0.94
VPS26A-202ENST00000373382 SASH1O94885 1247 aa20.93■□□□□ 0.94
VPS26A-202ENST00000373382 ANKRD1Q15327 319 aa20.93■□□□□ 0.94
VPS26A-202ENST00000373382 FMNL2Q96PY5 1086 aa20.93■□□□□ 0.94
VPS26A-202ENST00000373382 CGNQ9P2M7 1197 aaKnown RBP20.93■□□□□ 0.94
VPS26A-202ENST00000373382 TTC21AQ8NDW8 1320 aa20.92■□□□□ 0.94
VPS26A-202ENST00000373382 SKILP12757 684 aa20.92■□□□□ 0.94
VPS26A-202ENST00000373382 SIRT1Q96EB6 747 aa20.92■□□□□ 0.94
VPS26A-202ENST00000373382 ERC1Q8IUD2 1116 aa20.92■□□□□ 0.94
VPS26A-202ENST00000373382 CCT2P78371 535 aaKnown RBP20.91■□□□□ 0.94
VPS26A-202ENST00000373382 Q6ZUG5 572 aa20.91■□□□□ 0.94
VPS26A-202ENST00000373382 SEC62Q99442 399 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms