RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CT47A1Q5JQC4 288 aaPredicted RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 SSH3Q8TE77 659 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 TRIM5Q9C035 493 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 SOX12O15370 315 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 STARD3NLO95772 234 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 CASTP20810 708 aaKnown RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 HOXC9P31274 260 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 MYO6Q9UM54 1294 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 DIP2BQ9P265 1576 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 SSFA2P28290 1259 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 STIM1Q13586 685 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 EIF3JO75822 258 aaKnown RBP8.54□□□□□ -1.04
VTA1-202ENST00000367630 HSPA4P34932 840 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 CCDC57Q2TAC2 916 aa8.54□□□□□ -1.04
VTA1-202ENST00000367630 SLIT1O75093 1534 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 XRCC6P12956 609 aaKnown RBP eCLIP8.53□□□□□ -1.042e-7■■■■■ 30.5
VTA1-202ENST00000367630 MNS1Q8NEH6 495 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 OVOS2A0A0J9YW53 1432 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 OVOS2Q6IE36 1432 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 CADPS2Q86UW7 1296 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 C8orf58Q8NAV2 365 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 CUL4AQ13619 759 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 NAA16Q6N069 864 aaPredicted RBP8.53□□□□□ -1.04
VTA1-202ENST00000367630 CDC25BP30305 580 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
VTA1-202ENST00000367630 LRRC27Q9C0I9 530 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 FBXO31Q5XUX0 539 aaPredicted RBP8.53□□□□□ -1.04
VTA1-202ENST00000367630 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.53□□□□□ -1.04
VTA1-202ENST00000367630 SDF4Q9BRK5 362 aa8.53□□□□□ -1.04
VTA1-202ENST00000367630 DDX21Q9NR30 783 aaKnown RBP eCLIP8.53□□□□□ -1.04
VTA1-202ENST00000367630 FILIP1Q7Z7B0 1213 aa8.52□□□□□ -1.04
VTA1-202ENST00000367630 DCAF5Q96JK2 942 aa8.52□□□□□ -1.04
VTA1-202ENST00000367630 AK7Q96M32 723 aa8.52□□□□□ -1.04
VTA1-202ENST00000367630 USP42Q9H9J4 1324 aaKnown RBP8.52□□□□□ -1.04
VTA1-202ENST00000367630 MON2Q7Z3U7 1717 aa8.52□□□□□ -1.04
VTA1-202ENST00000367630 GRM8O00222 908 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 BRD1O95696 1058 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 SPINK5Q9NQ38 1064 aaPredicted RBP8.52□□□□□ -1.05
VTA1-202ENST00000367630 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 ATG3Q9NT62 314 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 ZNF652Q9Y2D9 606 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 RUFY3Q7L099 469 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 MCM10Q7L590 875 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 FEZ1Q99689 392 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 EVA1CP58658 441 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 FAM107BQ9H098 131 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 NFXL1Q6ZNB6 911 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
VTA1-202ENST00000367630 CWC25Q9NXE8 425 aaPredicted RBP8.52□□□□□ -1.05
VTA1-202ENST00000367630 ABCC6O95255 1503 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 FGFR1OPO95684 399 aaKnown RBP8.51□□□□□ -1.05
VTA1-202ENST00000367630 CTAGE1Q96RT6 745 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 RIMS1Q86UR5 1692 aaKnown RBP8.51□□□□□ -1.05
VTA1-202ENST00000367630 SGSM2O43147 1006 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 EHBP1Q8NDI1 1231 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 NEK1Q96PY6 1258 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 CALM1P0DP23 149 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 CALM2P0DP24 149 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 CALM3P0DP25 149 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 R3HCC1Q9Y3T6 440 aaKnown RBP8.51□□□□□ -1.05
VTA1-202ENST00000367630 MAP3K19Q56UN5 1328 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 UQCRHLA0A096LP55 91 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 UQCRHP07919 91 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 SPAG1Q07617 926 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 MTX1Q13505 466 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 MCMDC2Q4G0Z9 681 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 KRT23Q9C075 422 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 RPAP1Q9BWH6 1393 aaPredicted RBP8.51□□□□□ -1.05
VTA1-202ENST00000367630 PCDH11XQ9BZA7 1347 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 PCDH11YQ9BZA8 1340 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 MTHFSDQ2M296 383 aaKnown RBP8.51□□□□□ -1.05
VTA1-202ENST00000367630 RTL9Q8NET4 1388 aa8.51□□□□□ -1.05
VTA1-202ENST00000367630 SETQ01105 290 aaPredicted RBP8.5□□□□□ -1.05
VTA1-202ENST00000367630 SEMA3FQ13275 785 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 UPF3BQ9BZI7 483 aaKnown RBP8.5□□□□□ -1.05
VTA1-202ENST00000367630 KIF18AQ8NI77 898 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 LMTK3Q96Q04 1460 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 KCNA6P17658 529 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 CDC5LQ99459 802 aaKnown RBP8.5□□□□□ -1.05
VTA1-202ENST00000367630 CCDC69A6NI79 296 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 DSCC1Q9BVC3 393 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 KIF1AQ12756 1690 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 RNMTO43148 476 aaKnown RBP8.5□□□□□ -1.05
VTA1-202ENST00000367630 CCAR1Q8IX12 1150 aaKnown RBP8.5□□□□□ -1.05
VTA1-202ENST00000367630 RMND1Q9NWS8 449 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 KIF20AO95235 890 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 GJB2P29033 226 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 MEIS3Q99687 375 aa8.5□□□□□ -1.05
VTA1-202ENST00000367630 FIBPO43427 364 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 GIGYF1O75420 1035 aaPredicted RBP8.49□□□□□ -1.05
VTA1-202ENST00000367630 PCP11498 1178 aaKnown RBP8.49□□□□□ -1.05
VTA1-202ENST00000367630 MTA3Q9BTC8 594 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 SYCE3A1L190 88 aa8.49□□□□□ -1.05
VTA1-202ENST00000367630 FMNL3Q8IVF7 1028 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms