RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-201ENST00000359867 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-201ENST00000359867 RC3H1Q5TC82 1133 aaKnown RBP17.08■□□□□ 0.32
CSNK1E-201ENST00000359867 METTL22Q9BUU2 404 aaPredicted RBP17.08■□□□□ 0.32
CSNK1E-201ENST00000359867 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
CSNK1E-201ENST00000359867 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
CSNK1E-201ENST00000359867 PLEKHM2Q8IWE5 1019 aa17.07■□□□□ 0.32
CSNK1E-201ENST00000359867 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
CSNK1E-201ENST00000359867 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
CSNK1E-201ENST00000359867 CAMKK2Q96RR4 588 aa17.06■□□□□ 0.32
CSNK1E-201ENST00000359867 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
CSNK1E-201ENST00000359867 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 RGPD3A6NKT7 1758 aaPredicted RBP17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 RGPD4Q7Z3J3 1758 aa17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 UBR3Q6ZT12 1888 aa17.05■□□□□ 0.32
CSNK1E-201ENST00000359867 BAG6P46379 1132 aa17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 SRP68Q9UHB9 627 aaKnown RBP17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 AFDNP55196 1824 aaKnown RBP17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 GPTP24298 496 aa17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 HDAC5Q9UQL6 1122 aa17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 NUP98P52948 1817 aa17.04■□□□□ 0.32
CSNK1E-201ENST00000359867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 GIGYF2Q6Y7W6 1299 aaKnown RBP17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 JARID2Q92833 1246 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 NBPF7P0C2Y1 421 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 BECN1Q14457 450 aa17.03■□□□□ 0.32
CSNK1E-201ENST00000359867 TTC22Q5TAA0 569 aa17.02■□□□□ 0.32
CSNK1E-201ENST00000359867 C4AP0C0L4 1744 aa17.02■□□□□ 0.32
CSNK1E-201ENST00000359867 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.32
CSNK1E-201ENST00000359867 TCIRG1Q13488 830 aa17.02■□□□□ 0.32
CSNK1E-201ENST00000359867 SSH3Q8TE77 659 aa17.02■□□□□ 0.32
CSNK1E-201ENST00000359867 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
CSNK1E-201ENST00000359867 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 ERVV-1B6SEH8 477 aa17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 GCKRQ14397 625 aa17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 USPL1Q5W0Q7 1092 aa17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 OSBPL3Q9H4L5 887 aa17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 BCORQ6W2J9 1755 aa17.01■□□□□ 0.31
CSNK1E-201ENST00000359867 POLA2Q14181 598 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 AKT1S1Q96B36 256 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 A0A087WZG4 1122 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 CDC45O75419 566 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 RFC4P35249 363 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 LRRCC1Q9C099 1032 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
CSNK1E-201ENST00000359867 GSPT1P15170 499 aaKnown RBP17■□□□□ 0.31
CSNK1E-201ENST00000359867 ISCA1Q9BUE6 129 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 BCL2L12Q9HB09 334 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 NARFQ9UHQ1 456 aa17■□□□□ 0.31
CSNK1E-201ENST00000359867 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 GRM8O00222 908 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 RAB11FIP3O75154 756 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 UBN2Q6ZU65 1347 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 SCN7AQ01118 1682 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 ZPR1O75312 459 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 CWC25Q9NXE8 425 aaPredicted RBP16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
CSNK1E-201ENST00000359867 APBB1O00213 710 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 BICDL1Q6ZP65 573 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 TBC1D9Q6ZT07 1266 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 USP42Q9H9J4 1324 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 SSFA2P28290 1259 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 RBM25P49756 843 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 MTX1Q13505 466 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
CSNK1E-201ENST00000359867 HSP90AB3PQ58FF7 597 aa16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 NLRP10Q86W26 655 aa16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 CCDC191Q8NCU4 936 aa16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.317e-11■■□□□ 14.3
CSNK1E-201ENST00000359867 NIP7Q9Y221 180 aaKnown RBP eCLIP16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 UTYO14607 1347 aa16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 ILDR2Q71H61 639 aa16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 CCDC125Q86Z20 511 aa16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 ZNF34Q8IZ26 560 aa16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
CSNK1E-201ENST00000359867 ADRA2BP18089 450 aa16.96■□□□□ 0.31
CSNK1E-201ENST00000359867 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.31
CSNK1E-201ENST00000359867 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
CSNK1E-201ENST00000359867 SYNE4Q8N205 404 aa16.96■□□□□ 0.31
CSNK1E-201ENST00000359867 ZNF652Q9Y2D9 606 aa16.96■□□□□ 0.31
CSNK1E-201ENST00000359867 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.31
CSNK1E-201ENST00000359867 PDE1AP54750 535 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms