RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 EN1Q05925 392 aaPredicted RBP18.13■□□□□ 0.49
GABPB1-202ENST00000359031 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.49
GABPB1-202ENST00000359031 RAB3GAP1Q15042 981 aa18.13■□□□□ 0.49
GABPB1-202ENST00000359031 ANO2Q9NQ90 1003 aa18.13■□□□□ 0.49
GABPB1-202ENST00000359031 PA2G4Q9UQ80 394 aaKnown RBP18.13■□□□□ 0.49
GABPB1-202ENST00000359031 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
GABPB1-202ENST00000359031 DDX11L8A8MPP1 907 aa18.12■□□□□ 0.49
GABPB1-202ENST00000359031 ITGB4P16144 1822 aa18.12■□□□□ 0.49
GABPB1-202ENST00000359031 MCM2P49736 904 aa18.11■□□□□ 0.49
GABPB1-202ENST00000359031 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
GABPB1-202ENST00000359031 RABL6Q3YEC7 729 aaPredicted RBP18.11■□□□□ 0.49
GABPB1-202ENST00000359031 FAM182BQ5T319 152 aa18.11■□□□□ 0.49
GABPB1-202ENST00000359031 DDX54Q8TDD1 881 aaKnown RBP18.11■□□□□ 0.49
GABPB1-202ENST00000359031 NRAPQ86VF7 1730 aa18.11■□□□□ 0.49
GABPB1-202ENST00000359031 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 SGSM2O43147 1006 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 SASH1O94885 1247 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
GABPB1-202ENST00000359031 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 NBPF10Q6P3W6 841 aaKnown RBP18.1■□□□□ 0.49
GABPB1-202ENST00000359031 AACSQ86V21 672 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 GBP4Q96PP9 640 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 COPRSQ9NQ92 184 aa18.1■□□□□ 0.49
GABPB1-202ENST00000359031 RAD50Q92878 1312 aa18.09■□□□□ 0.49
GABPB1-202ENST00000359031 PTMSP20962 102 aa18.09■□□□□ 0.49
GABPB1-202ENST00000359031 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
GABPB1-202ENST00000359031 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
GABPB1-202ENST00000359031 MAP4K4O95819 1239 aaPredicted RBP18.08■□□□□ 0.48
GABPB1-202ENST00000359031 CASP7P55210 303 aa18.08■□□□□ 0.48
GABPB1-202ENST00000359031 EPHA10Q5JZY3 1008 aa18.08■□□□□ 0.48
GABPB1-202ENST00000359031 UBE3BQ7Z3V4 1068 aa18.08■□□□□ 0.48
GABPB1-202ENST00000359031 RUFY2Q8WXA3 655 aa18.08■□□□□ 0.48
GABPB1-202ENST00000359031 EVI5LQ96CN4 794 aa18.08■□□□□ 0.48
GABPB1-202ENST00000359031 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.48
GABPB1-202ENST00000359031 A0A087WZG4 1122 aa18.07■□□□□ 0.48
GABPB1-202ENST00000359031 HSPA4P34932 840 aa18.07■□□□□ 0.48
GABPB1-202ENST00000359031 RFX5P48382 616 aaPredicted RBP18.07■□□□□ 0.48
GABPB1-202ENST00000359031 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
GABPB1-202ENST00000359031 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
GABPB1-202ENST00000359031 EAF2Q96CJ1 260 aaPredicted RBP18.06■□□□□ 0.48
GABPB1-202ENST00000359031 DIAPH3Q9NSV4 1193 aa18.06■□□□□ 0.48
GABPB1-202ENST00000359031 PALD1Q9ULE6 856 aa18.06■□□□□ 0.48
GABPB1-202ENST00000359031 HIP1O00291 1037 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 NUCB2P80303 420 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 IL25Q9H293 177 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 CWC25Q9NXE8 425 aaPredicted RBP18.05■□□□□ 0.48
GABPB1-202ENST00000359031 SPATA31A5Q5VU36 1347 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 SPATA31A7Q8IWB4 1347 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 H7C1W4 665 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
GABPB1-202ENST00000359031 NEK4P51957 841 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 CLEC17AQ6ZS10 378 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 KIAA1211Q6ZU35 1233 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 TEX13AQ9BXU3 409 aaPredicted RBP18.05■□□□□ 0.48
GABPB1-202ENST00000359031 LSG1Q9H089 658 aaKnown RBP18.05■□□□□ 0.48
GABPB1-202ENST00000359031 SIL1Q9H173 461 aa18.05■□□□□ 0.48
GABPB1-202ENST00000359031 A1BGP04217 495 aa18.04■□□□□ 0.48
GABPB1-202ENST00000359031 EZH2Q15910 746 aaKnown RBP18.04■□□□□ 0.48
GABPB1-202ENST00000359031 TTLL7Q6ZT98 887 aa18.04■□□□□ 0.48
GABPB1-202ENST00000359031 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
GABPB1-202ENST00000359031 CCDC191Q8NCU4 936 aa18.03■□□□□ 0.48
GABPB1-202ENST00000359031 DOT1LQ8TEK3 1739 aa18.02■□□□□ 0.48
GABPB1-202ENST00000359031 ANKRD36CQ5JPF3 1778 aa18.02■□□□□ 0.48
GABPB1-202ENST00000359031 KLHDC4Q8TBB5 520 aa18.02■□□□□ 0.48
GABPB1-202ENST00000359031 TRIM37O94972 964 aa18.01■□□□□ 0.47
GABPB1-202ENST00000359031 CWC27Q6UX04 472 aaKnown RBP18.01■□□□□ 0.47
GABPB1-202ENST00000359031 CCDC8Q9H0W5 538 aaPredicted RBP18.01■□□□□ 0.47
GABPB1-202ENST00000359031 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.01■□□□□ 0.47
GABPB1-202ENST00000359031 RFX7Q2KHR2 1363 aa18.01■□□□□ 0.47
GABPB1-202ENST00000359031 THSD7AQ9UPZ6 1657 aa18.01■□□□□ 0.47
GABPB1-202ENST00000359031 TNS1Q9HBL0 1735 aaKnown RBP18.01■□□□□ 0.47
GABPB1-202ENST00000359031 BCL9O00512 1426 aa18.01■□□□□ 0.47
GABPB1-202ENST00000359031 TRAK2O60296 914 aa18.01■□□□□ 0.47
GABPB1-202ENST00000359031 CYP2E1P05181 493 aaPredicted RBP18.01■□□□□ 0.47
GABPB1-202ENST00000359031 SSFA2P28290 1259 aa18.01■□□□□ 0.47
GABPB1-202ENST00000359031 FOXO4P98177 505 aa18.01■□□□□ 0.47
GABPB1-202ENST00000359031 TLR7Q9NYK1 1049 aaKnown RBP18.01■□□□□ 0.47
GABPB1-202ENST00000359031 CUL4AQ13619 759 aa18■□□□□ 0.47
GABPB1-202ENST00000359031 TNNI3KQ59H18 835 aa18■□□□□ 0.47
GABPB1-202ENST00000359031 PIGBQ92521 554 aa18■□□□□ 0.47
GABPB1-202ENST00000359031 JARID2Q92833 1246 aaPredicted RBP18■□□□□ 0.47
GABPB1-202ENST00000359031 TMX3Q96JJ7 454 aa18■□□□□ 0.47
GABPB1-202ENST00000359031 SNRKQ9NRH2 765 aa18■□□□□ 0.47
GABPB1-202ENST00000359031 FPGT-TNNI3KV9GXZ4 949 aa18■□□□□ 0.47
GABPB1-202ENST00000359031 APBA3O96018 575 aa17.99■□□□□ 0.47
GABPB1-202ENST00000359031 LMBR1LQ6UX01 489 aa17.99■□□□□ 0.47
GABPB1-202ENST00000359031 FAM196AQ6ZSG2 479 aa17.99■□□□□ 0.47
GABPB1-202ENST00000359031 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
GABPB1-202ENST00000359031 ZBTB3Q9H5J0 574 aa17.99■□□□□ 0.47
GABPB1-202ENST00000359031 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
GABPB1-202ENST00000359031 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
GABPB1-202ENST00000359031 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
GABPB1-202ENST00000359031 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
GABPB1-202ENST00000359031 SNX14Q9Y5W7 946 aa17.98■□□□□ 0.47
GABPB1-202ENST00000359031 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
GABPB1-202ENST00000359031 STARD3NLO95772 234 aa17.98■□□□□ 0.47
GABPB1-202ENST00000359031 ATP5JP18859 108 aa17.98■□□□□ 0.47
GABPB1-202ENST00000359031 TFCP2Q12800 502 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms