RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TMC6Q7Z403 805 aa18.56■□□□□ 0.56
PTPN11-201ENST00000351677 PHAXQ9H814 394 aaKnown RBP18.56■□□□□ 0.56
PTPN11-201ENST00000351677 KIF2AO00139 706 aaPredicted RBP18.56■□□□□ 0.56
PTPN11-201ENST00000351677 GRM8O00222 908 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
PTPN11-201ENST00000351677 CASQ1P31415 396 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 CCDC148Q8NFR7 591 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 WWC2Q6AWC2 1192 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 CEP85Q6P2H3 762 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 SLC26A6Q9BXS9 759 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
PTPN11-201ENST00000351677 LRRC59Q96AG4 307 aaKnown RBP18.55■□□□□ 0.56
PTPN11-201ENST00000351677 CCDC194A0A1B0GVG4 234 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 WDR62O43379 1518 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 PIK3C2GO75747 1445 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 KIAA0556O60303 1618 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 ERICH4A6NGS2 130 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 ZBTB40Q9NUA8 1239 aa18.55■□□□□ 0.56
PTPN11-201ENST00000351677 CCDC96Q2M329 555 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 LRSAM1Q6UWE0 723 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 USP48Q86UV5 1035 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 TMCO3Q6UWJ1 677 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
PTPN11-201ENST00000351677 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 MFSD6Q6ZSS7 791 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 KIF5CO60282 957 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 NEFHP12036 1026 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 TAF4BQ92750 862 aa18.54■□□□□ 0.56
PTPN11-201ENST00000351677 SPA17Q15506 151 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 UHRF1BP1LA0JNW5 1464 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 KIF4BQ2VIQ3 1234 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 FKBP15Q5T1M5 1219 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 TMOD2Q9NZR1 351 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 NCKAP5LQ9HCH0 1330 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 KLF18A0A0U1RQI7 1052 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 CBX1P83916 185 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 KSR2Q6VAB6 950 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 SNX21Q969T3 373 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 LMBR1LQ6UX01 489 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 NUP88Q99567 741 aaPredicted RBP18.53■□□□□ 0.56
PTPN11-201ENST00000351677 DCTPP1Q9H773 170 aa18.53■□□□□ 0.56
PTPN11-201ENST00000351677 UBA5Q9GZZ9 404 aa18.52■□□□□ 0.56
PTPN11-201ENST00000351677 MATR3P43243 847 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTPN11-201ENST00000351677 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.56
PTPN11-201ENST00000351677 MCM5P33992 734 aa18.52■□□□□ 0.56
PTPN11-201ENST00000351677 ENOX2Q16206 610 aaKnown RBP18.52■□□□□ 0.56
PTPN11-201ENST00000351677 RPGRQ92834 1020 aaKnown RBP18.52■□□□□ 0.56
PTPN11-201ENST00000351677 ZNF830Q96NB3 372 aaPredicted RBP18.52■□□□□ 0.55
PTPN11-201ENST00000351677 CACNA2D4Q7Z3S7 1137 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 ABCC1P33527 1531 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 ALDH1L1O75891 902 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 XRCC6P12956 609 aaKnown RBP eCLIP18.51■□□□□ 0.558e-6■■□□□ 12.6
PTPN11-201ENST00000351677 ANAPC15P60006 121 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
PTPN11-201ENST00000351677 TAX1BP1Q86VP1 789 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 CCDC191Q8NCU4 936 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
PTPN11-201ENST00000351677 ZSCAN16Q9H4T2 348 aaPredicted RBP18.51■□□□□ 0.55
PTPN11-201ENST00000351677 Q6ZUG5 572 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 TSG101Q99816 390 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 VAT1LQ9HCJ6 419 aa18.51■□□□□ 0.55
PTPN11-201ENST00000351677 PZPP20742 1482 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 CWF19L2Q2TBE0 894 aaKnown RBP18.5■□□□□ 0.55
PTPN11-201ENST00000351677 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 TSPY2A6NKD2 308 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 MCMDC2Q4G0Z9 681 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 KIAA0754O94854 1291 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 DNA2P51530 1060 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 UVSSAQ2YD98 709 aa18.5■□□□□ 0.55
PTPN11-201ENST00000351677 NPATQ14207 1427 aa18.49■□□□□ 0.55
PTPN11-201ENST00000351677 DNM1Q05193 864 aaKnown RBP18.49■□□□□ 0.55
PTPN11-201ENST00000351677 SMC5Q8IY18 1101 aa18.49■□□□□ 0.55
PTPN11-201ENST00000351677 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
PTPN11-201ENST00000351677 TAF3Q5VWG9 929 aa18.49■□□□□ 0.55
PTPN11-201ENST00000351677 WDR7Q9Y4E6 1490 aa18.49■□□□□ 0.55
PTPN11-201ENST00000351677 GSDMDP57764 484 aa18.49■□□□□ 0.55
PTPN11-201ENST00000351677 TMEM266Q2M3C6 531 aa18.49■□□□□ 0.55
PTPN11-201ENST00000351677 ZGPATQ8N5A5 531 aaKnown RBP18.49■□□□□ 0.55
PTPN11-201ENST00000351677 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
PTPN11-201ENST00000351677 IQSEC3Q9UPP2 1182 aaPredicted RBP18.49■□□□□ 0.55
PTPN11-201ENST00000351677 ARHGEF12Q9NZN5 1544 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 C6orf229H3BNL8 230 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 EYA1Q99502 592 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 FLT4P35916 1363 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 PRKCSHP14314 528 aaPredicted RBP18.48■□□□□ 0.55
PTPN11-201ENST00000351677 PPP1R12BO60237 982 aaPredicted RBP18.48■□□□□ 0.55
PTPN11-201ENST00000351677 NEMFO60524 1076 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 SSR1P43307 286 aaKnown RBP18.48■□□□□ 0.55
PTPN11-201ENST00000351677 CCDC102BQ68D86 513 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 RAB34Q9BZG1 259 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 ANO6Q4KMQ2 910 aa18.48■□□□□ 0.55
PTPN11-201ENST00000351677 COL17A1Q9UMD9 1497 aaPredicted RBP18.48■□□□□ 0.55
PTPN11-201ENST00000351677 SEPT7Q16181 437 aaKnown RBP18.47■□□□□ 0.55
PTPN11-201ENST00000351677 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 NGLY1Q96IV0 654 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 F13A1P00488 732 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 CADPS2Q86UW7 1296 aa18.47■□□□□ 0.55
PTPN11-201ENST00000351677 KAT14Q9H8E8 782 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms