RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 COL9A3Q14050 684 aaPredicted RBP25.79■■□□□ 1.72
CCDC38-201ENST00000344280 SYCE3A1L190 88 aa25.79■■□□□ 1.72
CCDC38-201ENST00000344280 JAKMIP1Q96N16 626 aaKnown RBP25.79■■□□□ 1.72
CCDC38-201ENST00000344280 CCDC171Q6TFL3 1326 aa25.78■■□□□ 1.72
CCDC38-201ENST00000344280 NECTIN1Q15223 517 aa25.78■■□□□ 1.72
CCDC38-201ENST00000344280 MRC1P22897 1456 aa25.78■■□□□ 1.72
CCDC38-201ENST00000344280 ESPNB1AK53 854 aa25.77■■□□□ 1.72
CCDC38-201ENST00000344280 ATP5J2-PTCD1G3V325 749 aa25.77■■□□□ 1.72
CCDC38-201ENST00000344280 PTCD1O75127 700 aaKnown RBP25.77■■□□□ 1.72
CCDC38-201ENST00000344280 CLCN1P35523 988 aa25.77■■□□□ 1.72
CCDC38-201ENST00000344280 FMNL2Q96PY5 1086 aa25.77■■□□□ 1.72
CCDC38-201ENST00000344280 TRIM44Q96DX7 344 aaPredicted RBP25.77■■□□□ 1.72
CCDC38-201ENST00000344280 SPATA31A3Q5VYP0 1347 aa25.77■■□□□ 1.72
CCDC38-201ENST00000344280 WDR33Q9C0J8 1336 aaKnown RBP25.77■■□□□ 1.72
CCDC38-201ENST00000344280 DCCP43146 1447 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 A0A0D9SFI3 127 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 GADD45BO75293 160 aaPredicted RBP25.76■■□□□ 1.71
CCDC38-201ENST00000344280 CABP4P57796 275 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 UBE3BQ7Z3V4 1068 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 KCNB2Q92953 911 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 EDC3Q96F86 508 aaKnown RBP25.76■■□□□ 1.71
CCDC38-201ENST00000344280 PPP1R9BQ96SB3 815 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 CCDC173Q0VFZ6 552 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 CADPS2Q86UW7 1296 aa25.76■■□□□ 1.71
CCDC38-201ENST00000344280 RBM8AQ9Y5S9 174 aaKnown RBP25.76■■□□□ 1.71
CCDC38-201ENST00000344280 TCHHQ07283 1943 aa25.75■■□□□ 1.71
CCDC38-201ENST00000344280 RFX5P48382 616 aaPredicted RBP25.75■■□□□ 1.71
CCDC38-201ENST00000344280 ZSWIM6Q9HCJ5 1215 aa25.75■■□□□ 1.71
CCDC38-201ENST00000344280 PDRG1Q9NUG6 133 aa25.75■■□□□ 1.71
CCDC38-201ENST00000344280 PTPN12Q05209 780 aaKnown RBP25.74■■□□□ 1.71
CCDC38-201ENST00000344280 FSD1Q9BTV5 496 aa25.74■■□□□ 1.71
CCDC38-201ENST00000344280 MBD3O95983 291 aa25.74■■□□□ 1.71
CCDC38-201ENST00000344280 CREB3L3Q68CJ9 461 aa25.74■■□□□ 1.71
CCDC38-201ENST00000344280 USP48Q86UV5 1035 aa25.74■■□□□ 1.71
CCDC38-201ENST00000344280 SYT1P21579 422 aa25.73■■□□□ 1.71
CCDC38-201ENST00000344280 LRSAM1Q6UWE0 723 aa25.73■■□□□ 1.71
CCDC38-201ENST00000344280 CCDC83Q8IWF9 413 aa25.73■■□□□ 1.71
CCDC38-201ENST00000344280 MAP4K1Q92918 833 aa25.73■■□□□ 1.71
CCDC38-201ENST00000344280 ABCC6O95255 1503 aa25.73■■□□□ 1.71
CCDC38-201ENST00000344280 PKD1L3Q7Z443 1732 aa25.73■■□□□ 1.71
CCDC38-201ENST00000344280 VPS53Q5VIR6 699 aa25.72■■□□□ 1.71
CCDC38-201ENST00000344280 COPRSQ9NQ92 184 aa25.72■■□□□ 1.71
CCDC38-201ENST00000344280 NDUFB9Q9Y6M9 179 aa25.72■■□□□ 1.71
CCDC38-201ENST00000344280 ST3GAL1Q11201 340 aa25.72■■□□□ 1.71
CCDC38-201ENST00000344280 DBNLQ9UJU6 430 aaKnown RBP25.72■■□□□ 1.71
CCDC38-201ENST00000344280 TAF6LQ9Y6J9 622 aa25.72■■□□□ 1.71
CCDC38-201ENST00000344280 GLI3P10071 1580 aa25.72■■□□□ 1.71
CCDC38-201ENST00000344280 HSPA2P54652 639 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 TFCP2Q12800 502 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 ZNF589Q86UQ0 364 aaPredicted RBP25.71■■□□□ 1.71
CCDC38-201ENST00000344280 TM6SF1Q9BZW5 370 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 CYP46A1Q9Y6A2 500 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 A0A087WZG4 1122 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 STX6O43752 255 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 KCNJ4P48050 445 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 SMC3Q9UQE7 1217 aa25.71■■□□□ 1.71
CCDC38-201ENST00000344280 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.71■■□□□ 1.71
CCDC38-201ENST00000344280 ZSCAN22P10073 491 aaPredicted RBP25.7■■□□□ 1.7
CCDC38-201ENST00000344280 SNRKQ9NRH2 765 aa25.7■■□□□ 1.7
CCDC38-201ENST00000344280 AFDNP55196 1824 aaKnown RBP25.7■■□□□ 1.7
CCDC38-201ENST00000344280 NBPF26B4DH59 902 aa25.7■■□□□ 1.7
CCDC38-201ENST00000344280 SLC27A2O14975 620 aa25.7■■□□□ 1.7
CCDC38-201ENST00000344280 CHGBP05060 677 aa25.7■■□□□ 1.7
CCDC38-201ENST00000344280 RABL6Q3YEC7 729 aaPredicted RBP25.7■■□□□ 1.7
CCDC38-201ENST00000344280 NBPF14Q5TI25 921 aa25.7■■□□□ 1.7
CCDC38-201ENST00000344280 NBPF10Q6P3W6 841 aaKnown RBP25.7■■□□□ 1.7
CCDC38-201ENST00000344280 NBPF15Q8N660 670 aa25.7■■□□□ 1.7
CCDC38-201ENST00000344280 CNPY2Q9Y2B0 182 aa25.7■■□□□ 1.7
CCDC38-201ENST00000344280 CPDO75976 1380 aa25.69■■□□□ 1.7
CCDC38-201ENST00000344280 HIP1O00291 1037 aa25.69■■□□□ 1.7
CCDC38-201ENST00000344280 ZKSCAN1P17029 563 aaPredicted RBP25.69■■□□□ 1.7
CCDC38-201ENST00000344280 ME3Q16798 604 aa25.69■■□□□ 1.7
CCDC38-201ENST00000344280 ANP32BQ92688 251 aaKnown RBP25.69■■□□□ 1.7
CCDC38-201ENST00000344280 ARFGEF2Q9Y6D5 1785 aa25.69■■□□□ 1.7
CCDC38-201ENST00000344280 CASP7P55210 303 aa25.68■■□□□ 1.7
CCDC38-201ENST00000344280 TNNI3KQ59H18 835 aa25.68■■□□□ 1.7
CCDC38-201ENST00000344280 FPGT-TNNI3KV9GXZ4 949 aa25.68■■□□□ 1.7
CCDC38-201ENST00000344280 MED23Q9ULK4 1368 aa25.68■■□□□ 1.7
CCDC38-201ENST00000344280 GJB2P29033 226 aa25.68■■□□□ 1.7
CCDC38-201ENST00000344280 NECAB1Q8N987 351 aa25.67■■□□□ 1.7
CCDC38-201ENST00000344280 TCEANC2Q96MN5 208 aa25.67■■□□□ 1.7
CCDC38-201ENST00000344280 PLBD2Q8NHP8 589 aa25.67■■□□□ 1.7
CCDC38-201ENST00000344280 TPCN1Q9ULQ1 816 aa25.67■■□□□ 1.7
CCDC38-201ENST00000344280 TPRNQ4KMQ1 711 aa25.66■■□□□ 1.7
CCDC38-201ENST00000344280 BRINP3Q76B58 766 aa25.66■■□□□ 1.7
CCDC38-201ENST00000344280 TTLL7Q6ZT98 887 aa25.66■■□□□ 1.7
CCDC38-201ENST00000344280 COL15A1P39059 1388 aa25.65■■□□□ 1.7
CCDC38-201ENST00000344280 F13A1P00488 732 aa25.65■■□□□ 1.7
CCDC38-201ENST00000344280 RNF214Q8ND24 703 aa25.65■■□□□ 1.7
CCDC38-201ENST00000344280 DBNDD2Q9BQY9 259 aa25.65■■□□□ 1.7
CCDC38-201ENST00000344280 LMBR1LQ6UX01 489 aa25.65■■□□□ 1.7
CCDC38-201ENST00000344280 PLEKHG2Q9H7P9 1386 aa25.64■■□□□ 1.7
CCDC38-201ENST00000344280 ATP5JP18859 108 aa25.64■■□□□ 1.7
CCDC38-201ENST00000344280 TOM1L2Q6ZVM7 507 aa25.64■■□□□ 1.7
CCDC38-201ENST00000344280 TMEM87AQ8NBN3 555 aa25.63■■□□□ 1.69
CCDC38-201ENST00000344280 PRDM11Q9NQV5 511 aa25.63■■□□□ 1.69
CCDC38-201ENST00000344280 A1BGP04217 495 aa25.63■■□□□ 1.69
CCDC38-201ENST00000344280 ZCRB1Q8TBF4 217 aaKnown RBP25.63■■□□□ 1.69
CCDC38-201ENST00000344280 ZSCAN31Q96LW9 406 aaPredicted RBP25.63■■□□□ 1.69
CCDC38-201ENST00000344280 SH2B1Q9NRF2 756 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms