RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CTU1Q7Z7A3 348 aaKnown RBP16.35■□□□□ 0.21
ATXN3-201ENST00000340660 PNMA8AQ86V59 439 aaPredicted RBP16.35■□□□□ 0.21
ATXN3-201ENST00000340660 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
ATXN3-201ENST00000340660 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
ATXN3-201ENST00000340660 CYP27B1O15528 508 aa16.34■□□□□ 0.21
ATXN3-201ENST00000340660 CGNL1Q0VF96 1302 aa16.34■□□□□ 0.21
ATXN3-201ENST00000340660 LTBP3Q9NS15 1303 aa16.34■□□□□ 0.21
ATXN3-201ENST00000340660 TK2O00142 265 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 TRAF5O00463 557 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 RPS6KA4O75676 772 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 CAMK2BQ13554 666 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 SAPCD2Q86UD0 394 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 NME9Q86XW9 330 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 KCNK17Q96T54 332 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 KDRP35968 1356 aa16.33■□□□□ 0.2
ATXN3-201ENST00000340660 C21orf2O43822 256 aa16.32■□□□□ 0.2
ATXN3-201ENST00000340660 TM4SF1P30408 202 aa16.32■□□□□ 0.2
ATXN3-201ENST00000340660 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
ATXN3-201ENST00000340660 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
ATXN3-201ENST00000340660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
ATXN3-201ENST00000340660 SLC4A9Q96Q91 983 aa16.32■□□□□ 0.2
ATXN3-201ENST00000340660 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
ATXN3-201ENST00000340660 BCL2L12Q9HB09 334 aa16.32■□□□□ 0.2
ATXN3-201ENST00000340660 KTN1Q86UP2 1357 aaKnown RBP16.31■□□□□ 0.2
ATXN3-201ENST00000340660 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
ATXN3-201ENST00000340660 RC3H1Q5TC82 1133 aaKnown RBP16.31■□□□□ 0.2
ATXN3-201ENST00000340660 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
ATXN3-201ENST00000340660 UNC80Q8N2C7 3258 aa16.3■□□□□ 0.2
ATXN3-201ENST00000340660 INSRP06213 1382 aa16.3■□□□□ 0.2
ATXN3-201ENST00000340660 CNTNAP4Q9C0A0 1308 aa16.3■□□□□ 0.2
ATXN3-201ENST00000340660 HRO43593 1189 aa16.3■□□□□ 0.2
ATXN3-201ENST00000340660 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
ATXN3-201ENST00000340660 RANBP2P49792 3224 aaKnown RBP16.3■□□□□ 0.2
ATXN3-201ENST00000340660 TRPM7Q96QT4 1865 aa16.29■□□□□ 0.2
ATXN3-201ENST00000340660 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
ATXN3-201ENST00000340660 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
ATXN3-201ENST00000340660 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
ATXN3-201ENST00000340660 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
ATXN3-201ENST00000340660 HHIPL1Q96JK4 782 aa16.28■□□□□ 0.2
ATXN3-201ENST00000340660 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
ATXN3-201ENST00000340660 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
ATXN3-201ENST00000340660 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.2
ATXN3-201ENST00000340660 COL25A1Q9BXS0 654 aaPredicted RBP16.27■□□□□ 0.2
ATXN3-201ENST00000340660 SAGE1Q9NXZ1 904 aa16.27■□□□□ 0.2
ATXN3-201ENST00000340660 CARMIL3Q8ND23 1372 aa16.26■□□□□ 0.19
ATXN3-201ENST00000340660 BRCA2P51587 3418 aa16.26■□□□□ 0.19
ATXN3-201ENST00000340660 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
ATXN3-201ENST00000340660 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
ATXN3-201ENST00000340660 HOXC9P31274 260 aa16.26■□□□□ 0.19
ATXN3-201ENST00000340660 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
ATXN3-201ENST00000340660 MYH14Q7Z406 1995 aaKnown RBP16.26■□□□□ 0.19
ATXN3-201ENST00000340660 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
ATXN3-201ENST00000340660 H0YIN7 160 aa16.24■□□□□ 0.19
ATXN3-201ENST00000340660 NOGQ13253 232 aa16.24■□□□□ 0.19
ATXN3-201ENST00000340660 ZDHHC16Q969W1 377 aa16.24■□□□□ 0.19
ATXN3-201ENST00000340660 ADAM33Q9BZ11 813 aa16.24■□□□□ 0.19
ATXN3-201ENST00000340660 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
ATXN3-201ENST00000340660 SBNO2Q9Y2G9 1366 aa16.24■□□□□ 0.19
ATXN3-201ENST00000340660 RNF186Q9NXI6 227 aa16.23■□□□□ 0.19
ATXN3-201ENST00000340660 DPYSL4O14531 572 aa16.22■□□□□ 0.19
ATXN3-201ENST00000340660 TRPA1O75762 1119 aa16.22■□□□□ 0.19
ATXN3-201ENST00000340660 PTPREP23469 700 aa16.22■□□□□ 0.19
ATXN3-201ENST00000340660 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
ATXN3-201ENST00000340660 PCDHGA10Q9Y5H3 936 aa16.22■□□□□ 0.19
ATXN3-201ENST00000340660 SCN11AQ9UI33 1791 aa16.22■□□□□ 0.19
ATXN3-201ENST00000340660 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
ATXN3-201ENST00000340660 CELF2O95319 508 aaKnown RBP16.21■□□□□ 0.19
ATXN3-201ENST00000340660 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
ATXN3-201ENST00000340660 VPS9D1Q9Y2B5 631 aa16.21■□□□□ 0.19
ATXN3-201ENST00000340660 VCANP13611 3396 aa16.21■□□□□ 0.18
ATXN3-201ENST00000340660 CEP290O15078 2479 aa16.2■□□□□ 0.18
ATXN3-201ENST00000340660 NFIXQ14938 502 aa16.2■□□□□ 0.18
ATXN3-201ENST00000340660 ZNF622Q969S3 477 aaKnown RBP eCLIP16.2■□□□□ 0.18
ATXN3-201ENST00000340660 BICDL1Q6ZP65 573 aa16.19■□□□□ 0.18
ATXN3-201ENST00000340660 HTTP42858 3142 aa16.19■□□□□ 0.18
ATXN3-201ENST00000340660 SPTBN5Q9NRC6 3674 aaKnown RBP16.18■□□□□ 0.18
ATXN3-201ENST00000340660 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
ATXN3-201ENST00000340660 SLC4A5Q9BY07 1137 aa16.18■□□□□ 0.18
ATXN3-201ENST00000340660 COL11A2P13942 1736 aaPredicted RBP16.17■□□□□ 0.18
ATXN3-201ENST00000340660 SERPINB2P05120 415 aa16.17■□□□□ 0.18
ATXN3-201ENST00000340660 FBLN1P23142 703 aa16.17■□□□□ 0.18
ATXN3-201ENST00000340660 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
ATXN3-201ENST00000340660 SYNE4Q8N205 404 aa16.17■□□□□ 0.18
ATXN3-201ENST00000340660 EVC2Q86UK5 1308 aa16.17■□□□□ 0.18
ATXN3-201ENST00000340660 FAM155AB1AL88 458 aaPredicted RBP16.16■□□□□ 0.18
ATXN3-201ENST00000340660 ZBED2Q9BTP6 218 aa16.16■□□□□ 0.18
ATXN3-201ENST00000340660 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
ATXN3-201ENST00000340660 AMPHP49418 695 aa16.15■□□□□ 0.18
ATXN3-201ENST00000340660 GPC2Q8N158 579 aa16.15■□□□□ 0.18
ATXN3-201ENST00000340660 PRDM6Q9NQX0 595 aa16.15■□□□□ 0.18
ATXN3-201ENST00000340660 FZD9O00144 591 aa16.14■□□□□ 0.17
ATXN3-201ENST00000340660 ANKRD31Q8N7Z5 1873 aa16.14■□□□□ 0.17
ATXN3-201ENST00000340660 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
ATXN3-201ENST00000340660 CENPFP49454 3210 aa16.13■□□□□ 0.17
ATXN3-201ENST00000340660 EPS15P42566 896 aa16.13■□□□□ 0.17
ATXN3-201ENST00000340660 KIF23Q02241 960 aaPredicted RBP16.13■□□□□ 0.17
ATXN3-201ENST00000340660 FBXO46Q6PJ61 603 aaPredicted RBP16.13■□□□□ 0.17
ATXN3-201ENST00000340660 ZNF277Q9NRM2 450 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms