RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 ADCK5Q3MIX3 580 aa23.83■■□□□ 1.41
LRFN4-201ENST00000309602 KCNB2Q92953 911 aa23.83■■□□□ 1.41
LRFN4-201ENST00000309602 LIMCH1Q9UPQ0 1083 aa23.83■■□□□ 1.41
LRFN4-201ENST00000309602 NASPP49321 788 aaPredicted RBP23.82■■□□□ 1.4
LRFN4-201ENST00000309602 RPAP1Q9BWH6 1393 aaPredicted RBP23.82■■□□□ 1.4
LRFN4-201ENST00000309602 RFX5P48382 616 aaPredicted RBP23.82■■□□□ 1.4
LRFN4-201ENST00000309602 UBE3BQ7Z3V4 1068 aa23.82■■□□□ 1.4
LRFN4-201ENST00000309602 ATP5J2-PTCD1G3V325 749 aa23.81■■□□□ 1.4
LRFN4-201ENST00000309602 PTCD1O75127 700 aaKnown RBP23.81■■□□□ 1.4
LRFN4-201ENST00000309602 NECTIN1Q15223 517 aa23.81■■□□□ 1.4
LRFN4-201ENST00000309602 BRINP3Q76B58 766 aa23.81■■□□□ 1.4
LRFN4-201ENST00000309602 JAKMIP1Q96N16 626 aaKnown RBP23.81■■□□□ 1.4
LRFN4-201ENST00000309602 COPRSQ9NQ92 184 aa23.81■■□□□ 1.4
LRFN4-201ENST00000309602 TMEM63CQ9P1W3 806 aa23.81■■□□□ 1.4
LRFN4-201ENST00000309602 AFDNP55196 1824 aaKnown RBP23.81■■□□□ 1.4
LRFN4-201ENST00000309602 ARFGEF2Q9Y6D5 1785 aa23.8■■□□□ 1.4
LRFN4-201ENST00000309602 WDR33Q9C0J8 1336 aaKnown RBP23.8■■□□□ 1.4
LRFN4-201ENST00000309602 HIP1O00291 1037 aa23.8■■□□□ 1.4
LRFN4-201ENST00000309602 PTPN12Q05209 780 aaKnown RBP23.8■■□□□ 1.4
LRFN4-201ENST00000309602 RBM8AQ9Y5S9 174 aaKnown RBP23.8■■□□□ 1.4
LRFN4-201ENST00000309602 PARP4Q9UKK3 1724 aaKnown RBP23.79■■□□□ 1.4
LRFN4-201ENST00000309602 LARGE1O95461 756 aa23.79■■□□□ 1.4
LRFN4-201ENST00000309602 FOXD4L6Q3SYB3 417 aaPredicted RBP23.79■■□□□ 1.4
LRFN4-201ENST00000309602 RABL6Q3YEC7 729 aaPredicted RBP23.79■■□□□ 1.4
LRFN4-201ENST00000309602 FOXD4L3Q6VB84 417 aaPredicted RBP23.79■■□□□ 1.4
LRFN4-201ENST00000309602 FSD1Q9BTV5 496 aa23.79■■□□□ 1.4
LRFN4-201ENST00000309602 ZSWIM6Q9HCJ5 1215 aa23.79■■□□□ 1.4
LRFN4-201ENST00000309602 ZNF335Q9H4Z2 1342 aaPredicted RBP23.79■■□□□ 1.4
LRFN4-201ENST00000309602 A0A0D9SFI3 127 aa23.79■■□□□ 1.4
LRFN4-201ENST00000309602 TM6SF1Q9BZW5 370 aa23.79■■□□□ 1.4
LRFN4-201ENST00000309602 XIRP1Q702N8 1843 aaKnown RBP23.78■■□□□ 1.4
LRFN4-201ENST00000309602 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 A0A087WZG4 1122 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 MBD3O95983 291 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 PLBD2Q8NHP8 589 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 MAP4K1Q92918 833 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 SNRKQ9NRH2 765 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 PDRG1Q9NUG6 133 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 COL15A1P39059 1388 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 PRIM1P49642 420 aaKnown RBP23.78■■□□□ 1.4
LRFN4-201ENST00000309602 VPS53Q5VIR6 699 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 PRDM11Q9NQV5 511 aa23.78■■□□□ 1.4
LRFN4-201ENST00000309602 WDR17Q8IZU2 1322 aa23.77■■□□□ 1.4
LRFN4-201ENST00000309602 NBPF26B4DH59 902 aa23.77■■□□□ 1.4
LRFN4-201ENST00000309602 CASP7P55210 303 aa23.77■■□□□ 1.4
LRFN4-201ENST00000309602 NBPF14Q5TI25 921 aa23.77■■□□□ 1.4
LRFN4-201ENST00000309602 CREB3L3Q68CJ9 461 aa23.77■■□□□ 1.4
LRFN4-201ENST00000309602 NBPF10Q6P3W6 841 aaKnown RBP23.77■■□□□ 1.4
LRFN4-201ENST00000309602 NBPF15Q8N660 670 aa23.77■■□□□ 1.4
LRFN4-201ENST00000309602 TFCP2Q12800 502 aa23.76■■□□□ 1.39
LRFN4-201ENST00000309602 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
LRFN4-201ENST00000309602 RBSNQ9H1K0 784 aa23.76■■□□□ 1.39
LRFN4-201ENST00000309602 CYP46A1Q9Y6A2 500 aa23.76■■□□□ 1.39
LRFN4-201ENST00000309602 TOM1L2Q6ZVM7 507 aa23.76■■□□□ 1.39
LRFN4-201ENST00000309602 ZCRB1Q8TBF4 217 aaKnown RBP23.76■■□□□ 1.39
LRFN4-201ENST00000309602 DBNLQ9UJU6 430 aaKnown RBP23.76■■□□□ 1.39
LRFN4-201ENST00000309602 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.76■■□□□ 1.39
LRFN4-201ENST00000309602 TNNI3KQ59H18 835 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 EDC3Q96F86 508 aaKnown RBP23.75■■□□□ 1.39
LRFN4-201ENST00000309602 GDPD2Q9HCC8 539 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 FPGT-TNNI3KV9GXZ4 949 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 PCDH11XQ9BZA7 1347 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 PCDH11YQ9BZA8 1340 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 ZKSCAN1P17029 563 aaPredicted RBP23.75■■□□□ 1.39
LRFN4-201ENST00000309602 KCNJ4P48050 445 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 CCDC173Q0VFZ6 552 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 MED23Q9ULK4 1368 aa23.75■■□□□ 1.39
LRFN4-201ENST00000309602 PPP1R9BQ96SB3 815 aa23.74■■□□□ 1.39
LRFN4-201ENST00000309602 SMC3Q9UQE7 1217 aa23.74■■□□□ 1.39
LRFN4-201ENST00000309602 SYCE3A1L190 88 aa23.74■■□□□ 1.39
LRFN4-201ENST00000309602 SLC27A2O14975 620 aa23.74■■□□□ 1.39
LRFN4-201ENST00000309602 ERBB4Q15303 1308 aa23.74■■□□□ 1.39
LRFN4-201ENST00000309602 SYT1P21579 422 aa23.73■■□□□ 1.39
LRFN4-201ENST00000309602 CCDC83Q8IWF9 413 aa23.73■■□□□ 1.39
LRFN4-201ENST00000309602 TRIM44Q96DX7 344 aaPredicted RBP23.73■■□□□ 1.39
LRFN4-201ENST00000309602 ZSCAN22P10073 491 aaPredicted RBP23.73■■□□□ 1.39
LRFN4-201ENST00000309602 LRSAM1Q6UWE0 723 aa23.73■■□□□ 1.39
LRFN4-201ENST00000309602 STX6O43752 255 aa23.72■■□□□ 1.39
LRFN4-201ENST00000309602 ATP5JP18859 108 aa23.72■■□□□ 1.39
LRFN4-201ENST00000309602 COL9A3Q14050 684 aaPredicted RBP23.72■■□□□ 1.39
LRFN4-201ENST00000309602 TTLL7Q6ZT98 887 aa23.72■■□□□ 1.39
LRFN4-201ENST00000309602 ZNF589Q86UQ0 364 aaPredicted RBP23.72■■□□□ 1.39
LRFN4-201ENST00000309602 USP48Q86UV5 1035 aa23.72■■□□□ 1.39
LRFN4-201ENST00000309602 GADD45BO75293 160 aaPredicted RBP23.72■■□□□ 1.39
LRFN4-201ENST00000309602 CLCN1P35523 988 aa23.72■■□□□ 1.39
LRFN4-201ENST00000309602 COL5A2P05997 1499 aaPredicted RBP23.71■■□□□ 1.39
LRFN4-201ENST00000309602 ESPNB1AK53 854 aa23.71■■□□□ 1.39
LRFN4-201ENST00000309602 ST3GAL1Q11201 340 aa23.71■■□□□ 1.39
LRFN4-201ENST00000309602 LMBR1LQ6UX01 489 aa23.71■■□□□ 1.39
LRFN4-201ENST00000309602 UBE2Q2Q8WVN8 375 aa23.71■■□□□ 1.39
LRFN4-201ENST00000309602 ZSCAN31Q96LW9 406 aaPredicted RBP23.71■■□□□ 1.39
LRFN4-201ENST00000309602 ERVV-2B6SEH9 535 aa23.71■■□□□ 1.39
LRFN4-201ENST00000309602 DTNBO60941 627 aa23.71■■□□□ 1.39
LRFN4-201ENST00000309602 SH2B1Q9NRF2 756 aaPredicted RBP23.71■■□□□ 1.39
LRFN4-201ENST00000309602 H7C1W4 665 aa23.7■■□□□ 1.38
LRFN4-201ENST00000309602 ANP32BQ92688 251 aaKnown RBP23.7■■□□□ 1.38
LRFN4-201ENST00000309602 DBNDD2Q9BQY9 259 aa23.7■■□□□ 1.38
LRFN4-201ENST00000309602 NDUFB9Q9Y6M9 179 aa23.7■■□□□ 1.38
LRFN4-201ENST00000309602 JCADQ9P266 1359 aa23.7■■□□□ 1.38
LRFN4-201ENST00000309602 SOS2Q07890 1332 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms