RNA–Protein interactions for RNA: ENST00000305103.3

COMMD5-201, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD5, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-201ENST00000305103 TRIM28Q13263 835 aaKnown RBP29.3■■■□□ 2.28
COMMD5-201ENST00000305103 TRMT112Q9UI30 125 aaKnown RBP29.3■■■□□ 2.28
COMMD5-201ENST00000305103 IBTKQ9P2D0 1353 aaPredicted RBP29.29■■■□□ 2.28
COMMD5-201ENST00000305103 KIAA1551Q9HCM1 1747 aa29.29■■■□□ 2.28
COMMD5-201ENST00000305103 CWF19L2Q2TBE0 894 aaKnown RBP29.29■■■□□ 2.28
COMMD5-201ENST00000305103 SLC4A10Q6U841 1118 aa29.29■■■□□ 2.28
COMMD5-201ENST00000305103 ABCC12Q96J65 1359 aa29.28■■■□□ 2.28
COMMD5-201ENST00000305103 A0A0G2JLW4 131 aa29.27■■■□□ 2.28
COMMD5-201ENST00000305103 RTL5Q5HYW3 569 aaPredicted RBP29.27■■■□□ 2.28
COMMD5-201ENST00000305103 SYNE4Q8N205 404 aa29.27■■■□□ 2.28
COMMD5-201ENST00000305103 CCDC191Q8NCU4 936 aa29.27■■■□□ 2.28
COMMD5-201ENST00000305103 BRIP1Q9BX63 1249 aa29.27■■■□□ 2.28
COMMD5-201ENST00000305103 CWC25Q9NXE8 425 aaPredicted RBP29.27■■■□□ 2.28
COMMD5-201ENST00000305103 KIF16BQ96L93 1317 aa29.27■■■□□ 2.28
COMMD5-201ENST00000305103 GOLGB1Q14789 3259 aaKnown RBP29.27■■■□□ 2.28
COMMD5-201ENST00000305103 NEURL1BA8MQ27 555 aa29.26■■■□□ 2.28
COMMD5-201ENST00000305103 PXDNLA1KZ92 1463 aa29.26■■■□□ 2.28
COMMD5-201ENST00000305103 CHRNA5P30532 468 aa29.26■■■□□ 2.27
COMMD5-201ENST00000305103 TGFB2P61812 414 aa29.26■■■□□ 2.27
COMMD5-201ENST00000305103 FRAT1Q92837 279 aaPredicted RBP29.26■■■□□ 2.27
COMMD5-201ENST00000305103 FAM89AQ96GI7 184 aa29.26■■■□□ 2.27
COMMD5-201ENST00000305103 TNRC6CQ9HCJ0 1690 aaKnown RBP29.25■■■□□ 2.27
COMMD5-201ENST00000305103 DPEP1P16444 411 aa29.25■■■□□ 2.27
COMMD5-201ENST00000305103 BEND3Q5T5X7 828 aa29.25■■■□□ 2.27
COMMD5-201ENST00000305103 LINS1Q8NG48 757 aa29.25■■■□□ 2.27
COMMD5-201ENST00000305103 JARID2Q92833 1246 aaPredicted RBP29.25■■■□□ 2.27
COMMD5-201ENST00000305103 SH3TC1Q8TE82 1336 aa29.24■■■□□ 2.27
COMMD5-201ENST00000305103 PDE6BP35913 854 aa29.24■■■□□ 2.27
COMMD5-201ENST00000305103 WWC3Q9ULE0 1092 aa29.24■■■□□ 2.27
COMMD5-201ENST00000305103 RNF123Q5XPI4 1314 aa29.23■■■□□ 2.27
COMMD5-201ENST00000305103 C2CD5Q86YS7 1000 aa29.23■■■□□ 2.27
COMMD5-201ENST00000305103 COL11A2P13942 1736 aaPredicted RBP29.22■■■□□ 2.27
COMMD5-201ENST00000305103 API5Q9BZZ5 524 aaKnown RBP29.22■■■□□ 2.27
COMMD5-201ENST00000305103 RCAN3Q9UKA8 241 aa29.22■■■□□ 2.27
COMMD5-201ENST00000305103 HCLS1P14317 486 aaPredicted RBP29.21■■■□□ 2.27
COMMD5-201ENST00000305103 GCKRQ14397 625 aa29.21■■■□□ 2.27
COMMD5-201ENST00000305103 ZBTB38Q8NAP3 1195 aaPredicted RBP29.21■■■□□ 2.27
COMMD5-201ENST00000305103 DDX60Q8IY21 1712 aaKnown RBP29.2■■■□□ 2.27
COMMD5-201ENST00000305103 H0YIN7 160 aa29.2■■■□□ 2.26
COMMD5-201ENST00000305103 KCNA3P22001 575 aa29.2■■■□□ 2.26
COMMD5-201ENST00000305103 SRCIN1Q9C0H9 1055 aa29.2■■■□□ 2.26
COMMD5-201ENST00000305103 DLEC1Q9Y238 1755 aa29.19■■■□□ 2.26
COMMD5-201ENST00000305103 IPO8O15397 1037 aaKnown RBP29.19■■■□□ 2.26
COMMD5-201ENST00000305103 PCCAP05165 728 aaPredicted RBP29.19■■■□□ 2.26
COMMD5-201ENST00000305103 SLC10A5Q5PT55 438 aa29.19■■■□□ 2.26
COMMD5-201ENST00000305103 ARHGAP45Q92619 1136 aa29.19■■■□□ 2.26
COMMD5-201ENST00000305103 BRCA1P38398 1863 aaKnown RBP29.19■■■□□ 2.26
COMMD5-201ENST00000305103 C3orf67Q6ZVT6 689 aa29.18■■■□□ 2.26
COMMD5-201ENST00000305103 TNNQ9UQP3 1299 aa29.18■■■□□ 2.26
COMMD5-201ENST00000305103 LAMB2P55268 1798 aa29.18■■■□□ 2.26
COMMD5-201ENST00000305103 IRS4O14654 1257 aaPredicted RBP29.17■■■□□ 2.26
COMMD5-201ENST00000305103 RIC1Q4ADV7 1423 aa29.17■■■□□ 2.26
COMMD5-201ENST00000305103 TRIM27P14373 513 aa29.16■■■□□ 2.26
COMMD5-201ENST00000305103 ZKSCAN2Q63HK3 967 aa29.16■■■□□ 2.26
COMMD5-201ENST00000305103 ATF7IPQ6VMQ6 1270 aa29.16■■■□□ 2.26
COMMD5-201ENST00000305103 UBE3BQ7Z3V4 1068 aa29.16■■■□□ 2.26
COMMD5-201ENST00000305103 PELP1Q8IZL8 1130 aaKnown RBP29.16■■■□□ 2.26
COMMD5-201ENST00000305103 NLRP3Q96P20 1036 aa29.16■■■□□ 2.26
COMMD5-201ENST00000305103 CACNA1SQ13698 1873 aa29.16■■■□□ 2.26
COMMD5-201ENST00000305103 KLRG2A4D1S0 409 aaPredicted RBP29.15■■■□□ 2.26
COMMD5-201ENST00000305103 ALDH1L1O75891 902 aa29.15■■■□□ 2.26
COMMD5-201ENST00000305103 SRGNP10124 158 aa29.15■■■□□ 2.26
COMMD5-201ENST00000305103 ZNF622Q969S3 477 aaKnown RBP eCLIP29.15■■■□□ 2.26
COMMD5-201ENST00000305103 PDZRN3Q9UPQ7 1066 aa29.15■■■□□ 2.26
COMMD5-201ENST00000305103 H7C1W4 665 aa29.14■■■□□ 2.26
COMMD5-201ENST00000305103 CLUAP1Q96AJ1 413 aa29.14■■■□□ 2.26
COMMD5-201ENST00000305103 PIM2Q9P1W9 311 aa29.13■■■□□ 2.25
COMMD5-201ENST00000305103 C9orf78Q9NZ63 289 aaPredicted RBP29.13■■■□□ 2.25
COMMD5-201ENST00000305103 GRM8O00222 908 aa29.12■■■□□ 2.25
COMMD5-201ENST00000305103 CRY2Q49AN0 593 aa29.12■■■□□ 2.25
COMMD5-201ENST00000305103 MASTLQ96GX5 879 aa29.12■■■□□ 2.25
COMMD5-201ENST00000305103 ABCC4O15439 1325 aa29.12■■■□□ 2.25
COMMD5-201ENST00000305103 CDHR2Q9BYE9 1310 aa29.12■■■□□ 2.25
COMMD5-201ENST00000305103 NPR1P16066 1061 aa29.11■■■□□ 2.25
COMMD5-201ENST00000305103 CCT4P50991 539 aaKnown RBP29.11■■■□□ 2.25
COMMD5-201ENST00000305103 RPGRQ92834 1020 aaKnown RBP29.11■■■□□ 2.25
COMMD5-201ENST00000305103 BCS1LQ9Y276 419 aa29.11■■■□□ 2.25
COMMD5-201ENST00000305103 MYH3P11055 1940 aa29.11■■■□□ 2.25
COMMD5-201ENST00000305103 CASP7P55210 303 aa29.1■■■□□ 2.25
COMMD5-201ENST00000305103 STYK1Q6J9G0 422 aa29.1■■■□□ 2.25
COMMD5-201ENST00000305103 PDE8AO60658 829 aa29.09■■■□□ 2.25
COMMD5-201ENST00000305103 GPR162Q16538 588 aa29.09■■■□□ 2.25
COMMD5-201ENST00000305103 DALRD3Q5D0E6 543 aaKnown RBP29.09■■■□□ 2.25
COMMD5-201ENST00000305103 UTRNP46939 3433 aa29.09■■■□□ 2.25
COMMD5-201ENST00000305103 TAF1P21675 1872 aa29.08■■■□□ 2.25
COMMD5-201ENST00000305103 PLIN1O60240 522 aa29.08■■■□□ 2.25
COMMD5-201ENST00000305103 HSP90B1P14625 803 aaKnown RBP29.08■■■□□ 2.25
COMMD5-201ENST00000305103 YBX3P16989 372 aaKnown RBP eCLIP29.08■■■□□ 2.25
COMMD5-201ENST00000305103 TTLL6Q8N841 843 aa29.08■■■□□ 2.25
COMMD5-201ENST00000305103 SLX4Q8IY92 1834 aa29.07■■■□□ 2.24
COMMD5-201ENST00000305103 NBPF7P0C2Y1 421 aaPredicted RBP29.06■■■□□ 2.24
COMMD5-201ENST00000305103 INTS3Q68E01 1043 aaKnown RBP29.06■■■□□ 2.24
COMMD5-201ENST00000305103 CNKSR1Q969H4 720 aa29.06■■■□□ 2.24
COMMD5-201ENST00000305103 CCDC85AQ96PX6 553 aaPredicted RBP29.06■■■□□ 2.24
COMMD5-201ENST00000305103 HOXA10P31260 410 aaPredicted RBP29.05■■■□□ 2.24
COMMD5-201ENST00000305103 SF3B3Q15393 1217 aaKnown RBP29.05■■■□□ 2.24
COMMD5-201ENST00000305103 FTSJ3Q8IY81 847 aaKnown RBP29.05■■■□□ 2.24
COMMD5-201ENST00000305103 DZIP1LQ8IYY4 767 aaKnown RBP29.05■■■□□ 2.24
COMMD5-201ENST00000305103 TMEM57Q8N5G2 664 aa29.05■■■□□ 2.24
COMMD5-201ENST00000305103 USP44Q9H0E7 712 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms