RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 CCDC171Q6TFL3 1326 aa24■■□□□ 1.43
SCUBE1-201ENST00000290460 USP48Q86UV5 1035 aa24■■□□□ 1.43
SCUBE1-201ENST00000290460 IFNL2Q8IZJ0 200 aa24■■□□□ 1.43
SCUBE1-201ENST00000290460 CYP27B1O15528 508 aa23.99■■□□□ 1.43
SCUBE1-201ENST00000290460 METTL22Q9BUU2 404 aaPredicted RBP23.99■■□□□ 1.43
SCUBE1-201ENST00000290460 TMEM94Q12767 1356 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 AFDNP55196 1824 aaKnown RBP23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 COL9A3Q14050 684 aaPredicted RBP23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 NECTIN1Q15223 517 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 LRP10Q7Z4F1 713 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 PDRG1Q9NUG6 133 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 SYT1P21579 422 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 ANKRD13DQ6ZTN6 518 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 CCDC83Q8IWF9 413 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 TTC5Q8N0Z6 440 aa23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 RBM8AQ9Y5S9 174 aaKnown RBP23.98■■□□□ 1.43
SCUBE1-201ENST00000290460 A0A0D9SFI3 127 aa23.97■■□□□ 1.43
SCUBE1-201ENST00000290460 TPRNQ4KMQ1 711 aa23.97■■□□□ 1.43
SCUBE1-201ENST00000290460 SMC3Q9UQE7 1217 aa23.97■■□□□ 1.43
SCUBE1-201ENST00000290460 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 ZSWIM6Q9HCJ5 1215 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 CNPY2Q9Y2B0 182 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 STX6O43752 255 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 ZSCAN22P10073 491 aaPredicted RBP23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 KCNJ4P48050 445 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 RNF214Q8ND24 703 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 NAP1L5Q96NT1 182 aaPredicted RBP23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 FSD1Q9BTV5 496 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 CYP46A1Q9Y6A2 500 aa23.96■■□□□ 1.43
SCUBE1-201ENST00000290460 SNRPA1P09661 255 aaKnown RBP23.95■■□□□ 1.43
SCUBE1-201ENST00000290460 VPS53Q5VIR6 699 aa23.95■■□□□ 1.43
SCUBE1-201ENST00000290460 CREB3L3Q68CJ9 461 aa23.95■■□□□ 1.43
SCUBE1-201ENST00000290460 EDC3Q96F86 508 aaKnown RBP23.95■■□□□ 1.43
SCUBE1-201ENST00000290460 KCNB2Q92953 911 aa23.95■■□□□ 1.42
SCUBE1-201ENST00000290460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.95■■□□□ 1.42
SCUBE1-201ENST00000290460 ATP5J2-PTCD1G3V325 749 aa23.94■■□□□ 1.42
SCUBE1-201ENST00000290460 PTCD1O75127 700 aaKnown RBP23.94■■□□□ 1.42
SCUBE1-201ENST00000290460 UBE3BQ7Z3V4 1068 aa23.94■■□□□ 1.42
SCUBE1-201ENST00000290460 DCAF5Q96JK2 942 aa23.94■■□□□ 1.42
SCUBE1-201ENST00000290460 MAP4K1Q92918 833 aa23.94■■□□□ 1.42
SCUBE1-201ENST00000290460 ZKSCAN1P17029 563 aaPredicted RBP23.93■■□□□ 1.42
SCUBE1-201ENST00000290460 GJB2P29033 226 aa23.93■■□□□ 1.42
SCUBE1-201ENST00000290460 ST3GAL1Q11201 340 aa23.93■■□□□ 1.42
SCUBE1-201ENST00000290460 TM6SF1Q9BZW5 370 aa23.93■■□□□ 1.42
SCUBE1-201ENST00000290460 ARFGEF2Q9Y6D5 1785 aa23.93■■□□□ 1.42
SCUBE1-201ENST00000290460 TAF6LQ9Y6J9 622 aa23.93■■□□□ 1.42
SCUBE1-201ENST00000290460 HIP1O00291 1037 aa23.92■■□□□ 1.42
SCUBE1-201ENST00000290460 ME3Q16798 604 aa23.92■■□□□ 1.42
SCUBE1-201ENST00000290460 NECAB1Q8N987 351 aa23.92■■□□□ 1.42
SCUBE1-201ENST00000290460 PDLIM2Q96JY6 352 aa23.92■■□□□ 1.42
SCUBE1-201ENST00000290460 FMNL2Q96PY5 1086 aa23.92■■□□□ 1.42
SCUBE1-201ENST00000290460 NDUFB9Q9Y6M9 179 aa23.92■■□□□ 1.42
SCUBE1-201ENST00000290460 MRC1P22897 1456 aa23.92■■□□□ 1.42
SCUBE1-201ENST00000290460 SLC27A2O14975 620 aa23.91■■□□□ 1.42
SCUBE1-201ENST00000290460 F13A1P00488 732 aa23.91■■□□□ 1.42
SCUBE1-201ENST00000290460 ZNF589Q86UQ0 364 aaPredicted RBP23.91■■□□□ 1.42
SCUBE1-201ENST00000290460 ZSCAN30Q86W11 494 aa23.91■■□□□ 1.42
SCUBE1-201ENST00000290460 TCEANC2Q96MN5 208 aa23.91■■□□□ 1.42
SCUBE1-201ENST00000290460 PKD1L3Q7Z443 1732 aa23.91■■□□□ 1.42
SCUBE1-201ENST00000290460 RFX5P48382 616 aaPredicted RBP23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 CABP4P57796 275 aa23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 PTPN12Q05209 780 aaKnown RBP23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 SYAP1Q96A49 352 aaPredicted RBP23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 DBNLQ9UJU6 430 aaKnown RBP23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 TNS3Q68CZ2 1445 aa23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 TFCP2Q12800 502 aa23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 COPRSQ9NQ92 184 aa23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 TPCN1Q9ULQ1 816 aa23.9■■□□□ 1.42
SCUBE1-201ENST00000290460 TMEM87AQ8NBN3 555 aa23.89■■□□□ 1.42
SCUBE1-201ENST00000290460 FIBPO43427 364 aa23.89■■□□□ 1.41
SCUBE1-201ENST00000290460 TSPY26PQ9H489 355 aa23.89■■□□□ 1.41
SCUBE1-201ENST00000290460 MED23Q9ULK4 1368 aa23.88■■□□□ 1.41
SCUBE1-201ENST00000290460 A0A087WZG4 1122 aa23.88■■□□□ 1.41
SCUBE1-201ENST00000290460 SH2B1Q9NRF2 756 aaPredicted RBP23.88■■□□□ 1.41
SCUBE1-201ENST00000290460 SNRKQ9NRH2 765 aa23.88■■□□□ 1.41
SCUBE1-201ENST00000290460 CHGBP05060 677 aa23.87■■□□□ 1.41
SCUBE1-201ENST00000290460 TNNI3KQ59H18 835 aa23.87■■□□□ 1.41
SCUBE1-201ENST00000290460 ZSCAN31Q96LW9 406 aaPredicted RBP23.87■■□□□ 1.41
SCUBE1-201ENST00000290460 FPGT-TNNI3KV9GXZ4 949 aa23.87■■□□□ 1.41
SCUBE1-201ENST00000290460 GLI3P10071 1580 aa23.87■■□□□ 1.41
SCUBE1-201ENST00000290460 MTMR6Q9Y217 621 aa23.87■■□□□ 1.41
SCUBE1-201ENST00000290460 ABCC6O95255 1503 aa23.86■■□□□ 1.41
SCUBE1-201ENST00000290460 VPS37CA5D8V6 355 aaPredicted RBP23.85■■□□□ 1.41
SCUBE1-201ENST00000290460 MSNP26038 577 aaKnown RBP23.85■■□□□ 1.41
SCUBE1-201ENST00000290460 DNM1Q05193 864 aaKnown RBP23.85■■□□□ 1.41
SCUBE1-201ENST00000290460 RABL6Q3YEC7 729 aaPredicted RBP23.85■■□□□ 1.41
SCUBE1-201ENST00000290460 SPATA31A3Q5VYP0 1347 aa23.85■■□□□ 1.41
SCUBE1-201ENST00000290460 CCDC9Q9Y3X0 531 aaKnown RBP23.85■■□□□ 1.41
SCUBE1-201ENST00000290460 COL15A1P39059 1388 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 DBNDD2Q9BQY9 259 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 LAMB4A4D0S4 1761 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 DCCP43146 1447 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 NBPF26B4DH59 902 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 ATP5JP18859 108 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 PSMA5P28066 241 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 NBPF14Q5TI25 921 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 NBPF10Q6P3W6 841 aaKnown RBP23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 BLOC1S2Q6QNY1 142 aa23.84■■□□□ 1.41
SCUBE1-201ENST00000290460 NBPF15Q8N660 670 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms