RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 PLA2G4DQ86XP0 818 aa22.13■■□□□ 1.13
SSC4D-201ENST00000275560 LEO1Q8WVC0 666 aaPredicted RBP22.13■■□□□ 1.13
SSC4D-201ENST00000275560 DNAAF4Q8WXU2 420 aa22.13■■□□□ 1.13
SSC4D-201ENST00000275560 PGBD1Q96JS3 809 aa22.13■■□□□ 1.13
SSC4D-201ENST00000275560 ECHDC1Q9NTX5 307 aa22.13■■□□□ 1.13
SSC4D-201ENST00000275560 ZNF165P49910 485 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 CEBPZQ03701 1054 aaKnown RBP22.12■■□□□ 1.13
SSC4D-201ENST00000275560 CLIP2Q9UDT6 1046 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 SLC27A2O14975 620 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 IFIT2P09913 472 aaKnown RBP22.12■■□□□ 1.13
SSC4D-201ENST00000275560 AACSQ86V21 672 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 BICD2Q8TD16 824 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 CCDC8Q9H0W5 538 aaPredicted RBP22.12■■□□□ 1.13
SSC4D-201ENST00000275560 CTNNA3Q9UI47 895 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 JAK2O60674 1132 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 NGDNQ8NEJ9 315 aaKnown RBP22.12■■□□□ 1.13
SSC4D-201ENST00000275560 TM6SF1Q9BZW5 370 aa22.12■■□□□ 1.13
SSC4D-201ENST00000275560 SMTNL1A8MU46 457 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 FOSBP53539 338 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 LGR6Q9HBX8 967 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 TTC41PQ6P2S7 1318 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 TECPR2O15040 1411 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 PXDNLA1KZ92 1463 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 A0A0D9SFI3 127 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 SLC26A8Q96RN1 970 aa22.11■■□□□ 1.13
SSC4D-201ENST00000275560 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
SSC4D-201ENST00000275560 KIF20AO95235 890 aa22.1■■□□□ 1.13
SSC4D-201ENST00000275560 NLRP6P59044 892 aa22.1■■□□□ 1.13
SSC4D-201ENST00000275560 ZNF771Q7L3S4 317 aaPredicted RBP22.1■■□□□ 1.13
SSC4D-201ENST00000275560 CLSTN2Q9H4D0 955 aa22.1■■□□□ 1.13
SSC4D-201ENST00000275560 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
SSC4D-201ENST00000275560 CCDC112Q8NEF3 446 aa22.09■■□□□ 1.13
SSC4D-201ENST00000275560 CACNA1FO60840 1977 aa22.09■■□□□ 1.13
SSC4D-201ENST00000275560 ELP1O95163 1332 aa22.09■■□□□ 1.13
SSC4D-201ENST00000275560 USP42Q9H9J4 1324 aaKnown RBP22.09■■□□□ 1.13
SSC4D-201ENST00000275560 HTATSF1O43719 755 aaKnown RBP22.09■■□□□ 1.13
SSC4D-201ENST00000275560 TOB2Q14106 344 aaPredicted RBP22.09■■□□□ 1.13
SSC4D-201ENST00000275560 CWF19L2Q2TBE0 894 aaKnown RBP22.09■■□□□ 1.13
SSC4D-201ENST00000275560 KCNB2Q92953 911 aa22.09■■□□□ 1.13
SSC4D-201ENST00000275560 LRRC37A3O60309 1634 aa22.09■■□□□ 1.13
SSC4D-201ENST00000275560 SIRT1Q96EB6 747 aa22.08■■□□□ 1.13
SSC4D-201ENST00000275560 BOLA2Q9H3K6 86 aa22.08■■□□□ 1.13
SSC4D-201ENST00000275560 BLOC1S2Q6QNY1 142 aa22.08■■□□□ 1.13
SSC4D-201ENST00000275560 MAP4K1Q92918 833 aa22.08■■□□□ 1.13
SSC4D-201ENST00000275560 FBXW7Q969H0 707 aa22.08■■□□□ 1.13
SSC4D-201ENST00000275560 EDC3Q96F86 508 aaKnown RBP22.08■■□□□ 1.13
SSC4D-201ENST00000275560 OGFRQ9NZT2 677 aa22.08■■□□□ 1.13
SSC4D-201ENST00000275560 CRYBG1Q9Y4K1 1723 aa22.08■■□□□ 1.12
SSC4D-201ENST00000275560 PPFIA3O75145 1194 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 HOXC9P31274 260 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 C11orf57Q6ZUT1 292 aaPredicted RBP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 TDRD7Q8NHU6 1098 aaKnown RBP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 PPP6R1Q9UPN7 881 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 N4BP2Q86UW6 1770 aaPredicted RBP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 ZNF589Q86UQ0 364 aaPredicted RBP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 FTOQ9C0B1 505 aaKnown RBP eCLIP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 SIL1Q9H173 461 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 NPHP3Q7Z494 1330 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 CHGBP05060 677 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 HSP90AB4PQ58FF6 505 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 ERCC4Q92889 916 aaPredicted RBP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 EVI5LQ96CN4 794 aa22.07■■□□□ 1.12
SSC4D-201ENST00000275560 SCAND2PQ9GZW5 306 aaPredicted RBP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 TRMT1Q9NXH9 659 aaKnown RBP22.07■■□□□ 1.12
SSC4D-201ENST00000275560 ADCY9O60503 1353 aa22.06■■□□□ 1.12
SSC4D-201ENST00000275560 EAF2Q96CJ1 260 aaPredicted RBP22.06■■□□□ 1.12
SSC4D-201ENST00000275560 FEZ1Q99689 392 aa22.06■■□□□ 1.12
SSC4D-201ENST00000275560 C9orf78Q9NZ63 289 aaPredicted RBP22.06■■□□□ 1.12
SSC4D-201ENST00000275560 EIF4A1P60842 406 aaKnown RBP22.06■■□□□ 1.12
SSC4D-201ENST00000275560 CEP135Q66GS9 1140 aa22.06■■□□□ 1.12
SSC4D-201ENST00000275560 DDX19AQ9NUU7 478 aaKnown RBP22.06■■□□□ 1.12
SSC4D-201ENST00000275560 PROSER3Q2NL68 480 aa22.05■■□□□ 1.12
SSC4D-201ENST00000275560 KLHDC4Q8TBB5 520 aa22.05■■□□□ 1.12
SSC4D-201ENST00000275560 USP16Q9Y5T5 823 aa22.05■■□□□ 1.12
SSC4D-201ENST00000275560 NDUFB9Q9Y6M9 179 aa22.05■■□□□ 1.12
SSC4D-201ENST00000275560 TOPAZ1Q8N9V7 1692 aa22.05■■□□□ 1.12
SSC4D-201ENST00000275560 NPHP1O15259 732 aa22.04■■□□□ 1.12
SSC4D-201ENST00000275560 PDCP20941 246 aa22.04■■□□□ 1.12
SSC4D-201ENST00000275560 RPS6KB1P23443 525 aa22.04■■□□□ 1.12
SSC4D-201ENST00000275560 FSD1Q9BTV5 496 aa22.04■■□□□ 1.12
SSC4D-201ENST00000275560 LRRC2Q9BYS8 371 aa22.04■■□□□ 1.12
SSC4D-201ENST00000275560 RBM43Q6ZSC3 357 aaKnown RBP22.04■■□□□ 1.12
SSC4D-201ENST00000275560 FILIP1Q7Z7B0 1213 aa22.04■■□□□ 1.12
SSC4D-201ENST00000275560 ZNF215Q9UL58 517 aaPredicted RBP22.04■■□□□ 1.12
SSC4D-201ENST00000275560 MAP3K2Q9Y2U5 619 aa22.04■■□□□ 1.12
SSC4D-201ENST00000275560 SETD1BQ9UPS6 1966 aaKnown RBP22.04■■□□□ 1.12
SSC4D-201ENST00000275560 SASH1O94885 1247 aa22.03■■□□□ 1.12
SSC4D-201ENST00000275560 BRF1Q92994 677 aa22.03■■□□□ 1.12
SSC4D-201ENST00000275560 GPATCH3Q96I76 525 aa22.03■■□□□ 1.12
SSC4D-201ENST00000275560 DDX41Q9UJV9 622 aaKnown RBP22.03■■□□□ 1.12
SSC4D-201ENST00000275560 LRRC8AQ8IWT6 810 aa22.03■■□□□ 1.12
SSC4D-201ENST00000275560 SYTL4Q96C24 671 aaPredicted RBP22.03■■□□□ 1.12
SSC4D-201ENST00000275560 PRAMEF22A3QJZ6 481 aa22.02■■□□□ 1.12
SSC4D-201ENST00000275560 CGNQ9P2M7 1197 aaKnown RBP22.02■■□□□ 1.12
SSC4D-201ENST00000275560 NPHP4O75161 1426 aaPredicted RBP22.02■■□□□ 1.12
SSC4D-201ENST00000275560 PSMA5P28066 241 aa22.02■■□□□ 1.12
SSC4D-201ENST00000275560 LTKP29376 864 aa22.02■■□□□ 1.12
SSC4D-201ENST00000275560 C14orf37Q86TY3 774 aa22.02■■□□□ 1.11
SSC4D-201ENST00000275560 KMT5BQ4FZB7 885 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms