RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 DICER1Q9UPY3 1922 aaKnown RBP12□□□□□ -0.49
TPM3-201ENST00000271850 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
TPM3-201ENST00000271850 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.497e-10■■□□□ 13
TPM3-201ENST00000271850 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
TPM3-201ENST00000271850 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
TPM3-201ENST00000271850 DLG5Q8TDM6 1919 aa11.99□□□□□ -0.49
TPM3-201ENST00000271850 SRGNP10124 158 aa11.99□□□□□ -0.49
TPM3-201ENST00000271850 JMYQ8N9B5 988 aa11.99□□□□□ -0.49
TPM3-201ENST00000271850 C7orf43Q8WVR3 580 aa11.99□□□□□ -0.49
TPM3-201ENST00000271850 ZNF622Q969S3 477 aaKnown RBP eCLIP11.99□□□□□ -0.492e-8■■□□□ 13.1
TPM3-201ENST00000271850 KLRG1Q96E93 195 aa11.99□□□□□ -0.49
TPM3-201ENST00000271850 MIS18AQ9NYP9 233 aa11.99□□□□□ -0.49
TPM3-201ENST00000271850 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
TPM3-201ENST00000271850 SNED1Q8TER0 1413 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 PYGBP11216 843 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 HLFQ16534 295 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 PRPF40BQ6NWY9 871 aaKnown RBP11.98□□□□□ -0.49
TPM3-201ENST00000271850 OLFM4Q6UX06 510 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 SLC51AQ86UW1 340 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 CNBD1Q8NA66 436 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 SETDB2Q96T68 719 aa11.98□□□□□ -0.49
TPM3-201ENST00000271850 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
TPM3-201ENST00000271850 KLRG2A4D1S0 409 aaPredicted RBP11.97□□□□□ -0.49
TPM3-201ENST00000271850 SNRPA1P09661 255 aaKnown RBP11.97□□□□□ -0.49
TPM3-201ENST00000271850 PDE6BP35913 854 aa11.97□□□□□ -0.49
TPM3-201ENST00000271850 STYK1Q6J9G0 422 aa11.97□□□□□ -0.49
TPM3-201ENST00000271850 C16orf71Q8IYS4 520 aaPredicted RBP11.97□□□□□ -0.49
TPM3-201ENST00000271850 ABCC12Q96J65 1359 aa11.96□□□□□ -0.49
TPM3-201ENST00000271850 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
TPM3-201ENST00000271850 SMC1BQ8NDV3 1235 aa11.96□□□□□ -0.49
TPM3-201ENST00000271850 THUMPD2Q9BTF0 503 aaKnown RBP11.96□□□□□ -0.49
TPM3-201ENST00000271850 COL4A5P29400 1685 aa11.95□□□□□ -0.5
TPM3-201ENST00000271850 HTATSF1O43719 755 aaKnown RBP11.95□□□□□ -0.5
TPM3-201ENST00000271850 VEGFAP15692 232 aaPredicted RBP11.95□□□□□ -0.5
TPM3-201ENST00000271850 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
TPM3-201ENST00000271850 MASTLQ96GX5 879 aa11.95□□□□□ -0.5
TPM3-201ENST00000271850 PDZRN3Q9UPQ7 1066 aa11.95□□□□□ -0.5
TPM3-201ENST00000271850 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
TPM3-201ENST00000271850 DDNO94850 711 aaPredicted RBP11.94□□□□□ -0.5
TPM3-201ENST00000271850 ST5P78524 1137 aa11.94□□□□□ -0.5
TPM3-201ENST00000271850 TAF7Q15545 349 aaPredicted RBP11.94□□□□□ -0.5
TPM3-201ENST00000271850 ERFEQ4G0M1 354 aa11.94□□□□□ -0.5
TPM3-201ENST00000271850 NBPF5PQ86XG9 351 aaPredicted RBP11.94□□□□□ -0.5
TPM3-201ENST00000271850 SPNS2Q8IVW8 549 aa11.94□□□□□ -0.5
TPM3-201ENST00000271850 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
TPM3-201ENST00000271850 TAOK3Q9H2K8 898 aa11.94□□□□□ -0.5
TPM3-201ENST00000271850 EIF4A1P60842 406 aaKnown RBP11.93□□□□□ -0.5
TPM3-201ENST00000271850 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
TPM3-201ENST00000271850 TTLL7Q6ZT98 887 aa11.93□□□□□ -0.5
TPM3-201ENST00000271850 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
TPM3-201ENST00000271850 CNKSR1Q969H4 720 aa11.93□□□□□ -0.5
TPM3-201ENST00000271850 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
TPM3-201ENST00000271850 NIP7Q9Y221 180 aaKnown RBP eCLIP11.93□□□□□ -0.5
TPM3-201ENST00000271850 UBN2Q6ZU65 1347 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 RGL2O15211 777 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 NUP98P52948 1817 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
TPM3-201ENST00000271850 NPR1P16066 1061 aa11.91□□□□□ -0.5
TPM3-201ENST00000271850 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
TPM3-201ENST00000271850 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
TPM3-201ENST00000271850 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
TPM3-201ENST00000271850 LTBP1Q14766 1721 aa11.9□□□□□ -0.5
TPM3-201ENST00000271850 NFE2L2Q16236 605 aa11.9□□□□□ -0.5
TPM3-201ENST00000271850 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
TPM3-201ENST00000271850 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.5
TPM3-201ENST00000271850 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
TPM3-201ENST00000271850 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
TPM3-201ENST00000271850 PASKQ96RG2 1323 aa11.89□□□□□ -0.51
TPM3-201ENST00000271850 FKBP4Q02790 459 aaKnown RBP eCLIP11.89□□□□□ -0.51
TPM3-201ENST00000271850 PDIA6Q15084 440 aa11.89□□□□□ -0.51
TPM3-201ENST00000271850 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
TPM3-201ENST00000271850 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
TPM3-201ENST00000271850 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
TPM3-201ENST00000271850 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
TPM3-201ENST00000271850 RIC1Q4ADV7 1423 aa11.88□□□□□ -0.51
TPM3-201ENST00000271850 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
TPM3-201ENST00000271850 NPHP1O15259 732 aa11.88□□□□□ -0.51
TPM3-201ENST00000271850 MKRN3Q13064 507 aaKnown RBP11.88□□□□□ -0.51
TPM3-201ENST00000271850 PROSER3Q2NL68 480 aa11.88□□□□□ -0.51
TPM3-201ENST00000271850 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
TPM3-201ENST00000271850 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
TPM3-201ENST00000271850 NPM2Q86SE8 214 aaKnown RBP11.88□□□□□ -0.51
TPM3-201ENST00000271850 TAF1DQ9H5J8 278 aaPredicted RBP11.88□□□□□ -0.51
TPM3-201ENST00000271850 SCN4AP35499 1836 aa11.88□□□□□ -0.51
TPM3-201ENST00000271850 FZD9O00144 591 aa11.87□□□□□ -0.51
TPM3-201ENST00000271850 NTSR2O95665 410 aa11.87□□□□□ -0.51
TPM3-201ENST00000271850 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
TPM3-201ENST00000271850 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
TPM3-201ENST00000271850 MYL6BP14649 208 aa11.87□□□□□ -0.51
TPM3-201ENST00000271850 GPTP24298 496 aa11.87□□□□□ -0.51
TPM3-201ENST00000271850 SOGA3Q5TF21 947 aa11.87□□□□□ -0.51
TPM3-201ENST00000271850 ZNF467Q7Z7K2 595 aaPredicted RBP11.87□□□□□ -0.51
TPM3-201ENST00000271850 ZNF34Q8IZ26 560 aa11.87□□□□□ -0.51
TPM3-201ENST00000271850 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms