RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
SPARC-201ENST00000231061 FAM117AQ9C073 453 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 USP25Q9UHP3 1055 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 COMMD10Q9Y6G5 202 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 CCDC175P0C221 793 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 CTR9Q6PD62 1173 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 GOLGA6L1Q8N7Z2 621 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 BRMS1Q9HCU9 246 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 KIF3CO14782 793 aa9.86□□□□□ -0.83
SPARC-201ENST00000231061 CPSF2Q9P2I0 782 aaKnown RBP9.86□□□□□ -0.83
SPARC-201ENST00000231061 VIRMAQ69YN4 1812 aaKnown RBP9.86□□□□□ -0.83
SPARC-201ENST00000231061 YTHDC2Q9H6S0 1430 aaKnown RBP9.86□□□□□ -0.83
SPARC-201ENST00000231061 IL16Q14005 1332 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 FCHSD2O94868 740 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 MAP9Q49MG5 647 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 CCDC47Q96A33 483 aaKnown RBP9.85□□□□□ -0.83
SPARC-201ENST00000231061 TRIM11Q96F44 468 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 YIPF2Q9BWQ6 316 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 SUN2Q9UH99 717 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 YEATS2Q9ULM3 1422 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 EVA1CP58658 441 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 LMBRD2Q68DH5 695 aaPredicted RBP9.85□□□□□ -0.83
SPARC-201ENST00000231061 WAPLQ7Z5K2 1190 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 MYLK4Q86YV6 388 aaPredicted RBP9.85□□□□□ -0.83
SPARC-201ENST00000231061 MKS1Q9NXB0 559 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 ADGRB2O60241 1585 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 AKNAD1Q5T1N1 836 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 DZIP3Q86Y13 1208 aaKnown RBP9.85□□□□□ -0.83
SPARC-201ENST00000231061 SMC5Q8IY18 1101 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 SEZ6LQ9BYH1 1024 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
SPARC-201ENST00000231061 PAXBP1Q9Y5B6 917 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 ZMYM3Q14202 1370 aa9.85□□□□□ -0.83
SPARC-201ENST00000231061 SETSIPP0DME0 302 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 ZNF394Q53GI3 561 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 ELOA2Q8IYF1 753 aaPredicted RBP9.84□□□□□ -0.83
SPARC-201ENST00000231061 RSPH9Q9H1X1 276 aaPredicted RBP9.84□□□□□ -0.83
SPARC-201ENST00000231061 COPB2P35606 906 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 ANTXR1Q9H6X2 564 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 PIK3C2BO00750 1634 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 HTATSF1O43719 755 aaKnown RBP9.84□□□□□ -0.83
SPARC-201ENST00000231061 BMS1Q14692 1282 aaKnown RBP9.84□□□□□ -0.83
SPARC-201ENST00000231061 LONRF1Q17RB8 773 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 ANKRD45Q5TZF3 282 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
SPARC-201ENST00000231061 ZBTB40Q9NUA8 1239 aa9.84□□□□□ -0.83
SPARC-201ENST00000231061 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.83□□□□□ -0.84
SPARC-201ENST00000231061 KINO60870 393 aaKnown RBP9.83□□□□□ -0.84
SPARC-201ENST00000231061 TGFB3P10600 412 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 IQCF2Q8IXL9 164 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 CWC25Q9NXE8 425 aaPredicted RBP9.83□□□□□ -0.84
SPARC-201ENST00000231061 FAN1Q9Y2M0 1017 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 DIP2CQ9Y2E4 1556 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 INHBEP58166 350 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 COL3A1P02461 1466 aaPredicted RBP9.83□□□□□ -0.84
SPARC-201ENST00000231061 NEO1Q92859 1461 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 KCNA2P16389 499 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 USP5P45974 858 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 MCCD1P59942 119 aaPredicted RBP9.83□□□□□ -0.84
SPARC-201ENST00000231061 E2F4Q16254 413 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 C11orf91Q3C1V1 193 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 MRRFQ96E11 262 aaKnown RBP9.83□□□□□ -0.84
SPARC-201ENST00000231061 CHMP5Q9NZZ3 219 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 EMILIN1Q9Y6C2 1016 aa9.83□□□□□ -0.84
SPARC-201ENST00000231061 ZCCHC8Q6NZY4 707 aaKnown RBP9.82□□□□□ -0.84
SPARC-201ENST00000231061 LZTS2Q9BRK4 669 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 RASSF4Q9H2L5 321 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 TMEM165Q9HC07 324 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 IP6K2Q9UHH9 426 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 PTPRMP28827 1452 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 ARHGAP31Q2M1Z3 1444 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 GOLGA6L22H0YM25 854 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 KIAA2012Q0VF49 1180 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 ALDH1L2Q3SY69 923 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 AMOTQ4VCS5 1084 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 C10orf62Q5T681 223 aaPredicted RBP9.82□□□□□ -0.84
SPARC-201ENST00000231061 CHD1LQ86WJ1 897 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 NEK9Q8TD19 979 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 PHACTR3Q96KR7 559 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 POLKQ9UBT6 870 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
SPARC-201ENST00000231061 MAP2K2P36507 400 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 NFE2L2Q16236 605 aa9.82□□□□□ -0.84
SPARC-201ENST00000231061 PPFIA3O75145 1194 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 NBPF7P0C2Y1 421 aaPredicted RBP9.81□□□□□ -0.84
SPARC-201ENST00000231061 MCM4P33991 863 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 NAIF1Q69YI7 327 aaPredicted RBP9.81□□□□□ -0.84
SPARC-201ENST00000231061 BARGINQ6ZT62 677 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 CCDC91Q7Z6B0 441 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 TMOD4Q9NZQ9 345 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 ZFYVE9O95405 1425 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 PPFIA2O75334 1257 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 NUCB1Q02818 461 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 FXNQ16595 210 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 JAKMIP3Q5VZ66 844 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 NME9Q86XW9 330 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 TSPYL6Q8N831 410 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms