RNA–Protein interactions for RNA: ENSMUST00000113689.7

Tpm1-208, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 904 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-208ENSMUST00000113689 Scn9aQ62205 1984 aa22.7■■□□□ 1.22
Tpm1-208ENSMUST00000113689 MypnQ5DTJ9 1315 aa22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Ttc41Q692V3 1318 aa22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Rbm25B2RY56 838 aaKnown RBP22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Myd88P22366 296 aa22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Lrch1P62046 709 aa22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Zc3h15Q3TIV5 426 aaKnown RBP22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Foxo4Q9WVH3 505 aa22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Cyp2ab1S4R196 498 aa22.69■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Slc4a9E9PUP3 929 aa22.68■■□□□ 1.22
Tpm1-208ENSMUST00000113689 CoilQ5SU73 570 aa22.68■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Btaf1E9QAE3 1848 aa22.68■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Fam83gQ5SWY7 812 aa22.67■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Speer4f1Q9D5Q6 258 aa22.67■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Ank1Q02357 1862 aa22.66■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Nup188Q6ZQH8 1759 aa22.66■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Ankrd50F7BE84 1390 aa22.66■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Cops6O88545 324 aa22.65■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Cyp7a1Q64505 503 aa22.65■■□□□ 1.22
Tpm1-208ENSMUST00000113689 Ttc21aQ8C0S4 1314 aa22.64■■□□□ 1.22
Tpm1-208ENSMUST00000113689 EappQ5BU09 281 aa22.64■■□□□ 1.21
Tpm1-208ENSMUST00000113689 AbraQ8BUZ1 375 aa22.64■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Arap2Q8BZ05 1703 aa22.63■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Ncbp3Q8BZR9 615 aaKnown RBP22.63■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Myoz2Q9JJW5 264 aa22.63■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Slc4a2P13808 1237 aaKnown RBP22.62■■□□□ 1.21
Tpm1-208ENSMUST00000113689 NfixP70257 488 aa22.62■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Gas2l2Q5SSG4 860 aa22.62■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Map3k2Q61083 619 aa22.62■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Clca2Q8BG22 942 aa22.62■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Tspoap1Q7TNF8 1846 aa22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Atp6v1aP50516 617 aaKnown RBP22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Fkbp5Q64378 456 aa22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Skor1Q8BX46 964 aa22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Sf3b3Q921M3 1217 aaKnown RBP22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Popdc2Q9ES82 367 aa22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Lgr5Q9Z1P4 907 aa22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Myh1Q5SX40 1942 aa22.61■■□□□ 1.21
Tpm1-208ENSMUST00000113689 NmiO35309 314 aa22.6■■□□□ 1.21
Tpm1-208ENSMUST00000113689 BcanQ61361 883 aa22.6■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Ppm1mQ8BU27 406 aa22.6■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Sde2Q8K1J5 448 aaKnown RBP22.6■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Glt1d1A4FUP9 346 aa22.59■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Oas2E9Q9A9 742 aa22.59■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Rad21Q61550 635 aaKnown RBP22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Ddx58Q6Q899 926 aa22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Ubxn2aQ99KJ0 258 aa22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Cdca7Q9D0M2 382 aa22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Echdc1Q9D9V3 322 aa22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Cwc25Q9DBF7 416 aa22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Adarb2Q9JI20 745 aa22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Ly6iQ9WU67 134 aa22.58■■□□□ 1.21
Tpm1-208ENSMUST00000113689 Gm6268A2A3U9 297 aa22.57■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Exoc6bA6H5Z3 810 aa22.57■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Eif6O55135 245 aa22.57■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Nlgn2Q69ZK9 836 aa22.57■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Ttc19Q8CC21 365 aa22.57■■□□□ 1.2
Tpm1-208ENSMUST00000113689 UvssaQ9D479 717 aa22.57■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Tbc1d8Q9Z1A9 1134 aa22.57■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Vamp4O70480 141 aa22.56■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Rangap1P46061 589 aaKnown RBP22.56■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Map9Q3TRR0 646 aa22.56■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Rtn4Q99P72 1162 aaKnown RBP22.56■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Trim26Q99PN3 545 aa22.56■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Gdf11Q9Z1W4 405 aa22.56■■□□□ 1.2
Tpm1-208ENSMUST00000113689 VeztQ3ZK22 780 aa22.55■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Scaf8Q6DID3 1268 aa22.55■■□□□ 1.2
Tpm1-208ENSMUST00000113689 HlfQ8BW74 295 aa22.55■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Plekhg6Q8R0J1 787 aa22.55■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Plagl1Q9JLQ4 704 aa22.55■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Pappa2E9PZ87 1789 aa22.55■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Ltn1Q6A009 1767 aa22.55■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Eddm13E9Q7F5 164 aa22.54■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Ksr2Q3UVC0 959 aa22.54■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Tom1l2Q5SRX1 507 aa22.54■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Ppp1r1bQ60829 194 aa22.54■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Sv2bQ8BG39 683 aa22.54■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Mak16Q8BGS0 296 aaKnown RBP22.53■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Kif2cQ922S8 721 aa22.53■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Dydc2Q9D3X8 139 aa22.53■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Stard3nlQ9DCI3 235 aa22.53■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Ehd4Q9EQP2 541 aa22.53■■□□□ 1.2
Tpm1-208ENSMUST00000113689 VegfbP49766 207 aa22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Rps8P62242 208 aaKnown RBP22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Chl1P70232 1209 aa22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 WasP70315 520 aa22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Ralbp1Q62172 648 aa22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Glis3Q6XP49 780 aa22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Fam213aQ9CYH2 218 aa22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Klf15Q9EPW2 415 aa22.52■■□□□ 1.2
Tpm1-208ENSMUST00000113689 Znf609Q8BZ47 1413 aa22.51■■□□□ 1.19
Tpm1-208ENSMUST00000113689 Psmd1Q3TXS7 953 aa22.51■■□□□ 1.19
Tpm1-208ENSMUST00000113689 Tbc1d32Q3URV1 1296 aa22.51■■□□□ 1.19
Tpm1-208ENSMUST00000113689 Map3k15A2AQW0 1331 aa22.51■■□□□ 1.19
Tpm1-208ENSMUST00000113689 Thsd7bQ6P4U0 1607 aa22.5■■□□□ 1.19
Tpm1-208ENSMUST00000113689 Trpm7Q923J1 1863 aa22.5■■□□□ 1.19
Tpm1-208ENSMUST00000113689 NudcO35685 332 aaKnown RBP22.5■■□□□ 1.19
Tpm1-208ENSMUST00000113689 Ripor2Q80U16 1078 aa22.5■■□□□ 1.19
Tpm1-208ENSMUST00000113689 Micall1Q8BGT6 870 aa22.5■■□□□ 1.19
Tpm1-208ENSMUST00000113689 NrdcQ8BHG1 1161 aa22.5■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms