RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Gbp4Q61107 620 aa8.39□□□□□ -1.07
Chm-202ENSMUST00000113388 Anp32cQ64G17 123 aa8.39□□□□□ -1.07
Chm-202ENSMUST00000113388 Smc1bQ920F6 1248 aa8.39□□□□□ -1.07
Chm-202ENSMUST00000113388 Tex14Q7M6U3 1450 aa8.39□□□□□ -1.07
Chm-202ENSMUST00000113388 N4bp2F8VQG7 1678 aaKnown RBP8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Znf335A2A5K6 1337 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Srek1Q8BZX4 494 aaKnown RBP8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Atp10bB1AWN4 1474 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Ppp2r3aB2RXC8 1150 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Hoxc9P09633 260 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 CrklP47941 303 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Psmd6Q99JI4 389 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Larp1bA0A0A6YXJ7 370 aaKnown RBP8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Tmx3Q8BXZ1 456 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Akap8Q9DBR0 687 aaKnown RBP8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Atp7bQ64446 1462 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Kif1aP33173 1695 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Catsper2A2ARP9 588 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Cep135Q6P5D4 1140 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Bicd2Q921C5 820 aa8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 NaspQ99MD9 773 aaKnown RBP8.38□□□□□ -1.07
Chm-202ENSMUST00000113388 Dhx8A2A4P0 1244 aaKnown RBP8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Mcm10Q0VBD2 885 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Polr3gQ6NXY9 223 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Ccdc155Q80VJ8 648 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 ClasrpQ8CFC7 668 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Ddx41Q91VN6 622 aaKnown RBP8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 IbtkQ6ZPR6 1352 aaKnown RBP8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Btn2a2A4QPC6 514 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Trim30cD3YVI9 513 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Jakmip3Q5DTN8 844 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Q7TT23 1179 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Ccdc178Q8CDV0 866 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Ttll12Q3UDE2 639 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Ncbp1Q3UYV9 790 aaKnown RBP8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Naif1Q6PFD7 327 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Eif2b5Q8CHW4 717 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Stk31Q99MW1 1018 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Cfap58B2RW38 873 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Nxf2Q4ZGD8 691 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Rassf10Q8BL43 508 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 Chd1lQ9CXF7 900 aa8.37□□□□□ -1.07
Chm-202ENSMUST00000113388 TnrQ8BYI9 1358 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Nhsl1Q8CAF4 1587 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 U2af1Q9D883 239 aaKnown RBP8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 PnisrA2AJT4 805 aaKnown RBP8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Adck5Q80V03 582 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Col16a1Q8BLX7 1580 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 PnnO35691 725 aaKnown RBP8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 CebpzP53569 1052 aaKnown RBP8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Rnf20Q5DTM8 973 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Lrrcc1Q69ZB0 1026 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Abcf1Q6P542 837 aaKnown RBP8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Ppp2r1aQ76MZ3 589 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Bsdc1Q80Y55 427 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Zkscan1Q8BGS3 561 aaKnown RBP8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Amotl1Q9D4H4 968 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Arl10Q9QXJ4 243 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 Wnk3Q80XP9 1757 aa8.36□□□□□ -1.07
Chm-202ENSMUST00000113388 MafgO54790 162 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Kdm4aQ8BW72 1064 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Camta1A2A891 1682 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Gm21680A0A0G2JGR8 267 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Nucb1Q02819 459 aaKnown RBP8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Rnf187Q8BFX1 236 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Pnpla2Q8BJ56 486 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Dnaaf4Q8R368 420 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Slc12a5Q91V14 1138 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Zeb2Q9R0G7 1215 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Fam135bQ9DAI6 1403 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Speer4bQ9D9F7 267 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Chd4Q6PDQ2 1915 aaKnown RBP8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Eif4a2P10630 407 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Lrriq3Q14DL3 633 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Tsen2Q6P7W5 460 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Trim42Q9D2H5 723 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Tbc1d8Q9Z1A9 1134 aa8.35□□□□□ -1.07
Chm-202ENSMUST00000113388 Oas2E9Q9A9 742 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Uri1Q3TLD5 531 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Kiaa0319Q5SZV5 1081 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Cep131Q62036 1060 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Smc5Q8CG46 1101 aaKnown RBP8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Mon2Q80TL7 1715 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Slit2Q9R1B9 1521 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Card6E9PWH2 1175 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 LnpkQ7TQ95 425 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Krt82Q99M74 516 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Eya1P97767 591 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 St18Q80TY4 1045 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Rpgrip1lQ8CG73 1264 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 TkfcQ8VC30 578 aa8.34□□□□□ -1.07
Chm-202ENSMUST00000113388 Lrrfip1Q3UZ39 729 aaKnown RBP8.34□□□□□ -1.08
Chm-202ENSMUST00000113388 Recql4Q75NR7 1216 aaKnown RBP8.34□□□□□ -1.08
Chm-202ENSMUST00000113388 CrebzfQ91ZR3 358 aa8.34□□□□□ -1.08
Chm-202ENSMUST00000113388 Cdk12Q14AX6 1484 aaKnown RBP8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Pdzrn4E9PUZ9 1014 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Lrrc23O35125 340 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Nap1l2P51860 460 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Cgnl1Q6AW69 1298 aa8.33□□□□□ -1.08
Chm-202ENSMUST00000113388 Phf20l1Q8CCJ9 1013 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms