RNA–Protein interactions for RNA: ENSMUST00000111354.1

Nr1h3-202, Transcript of Oxysterols receptor LXR-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nr1h3, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3-202ENSMUST00000111354 ScaperF8VQ70 1398 aaKnown RBP20.54■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Prl3d2F6R3P9 224 aa20.54■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Trim34bJ3QNR8 485 aa20.54■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Mmp8O70138 465 aa20.54■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Pa2g4P50580 394 aaKnown RBP20.53■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 VgfQ0VGU4 617 aa20.53■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Slc4a10Q5DTL9 1118 aa20.53■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 HnrnpuQ8VEK3 800 aaKnown RBP20.53■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Sf3b3Q921M3 1217 aaKnown RBP20.53■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Mtfr1lQ9CWE0 289 aa20.53■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Gja10Q9WUS4 505 aa20.53■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Eif4g2Q62448 906 aaKnown RBP20.52■□□□□ 0.88
Nr1h3-202ENSMUST00000111354 Itgb4A2A863 1818 aa20.52■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Frmpd3A0A140LIW3 1774 aa20.51■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Gpr150Q8BL07 427 aa20.51■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 St5Q924W7 1134 aa20.51■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Armcx1Q9CX83 456 aa20.51■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Nol10Q5RJG1 687 aaKnown RBP20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Itga6Q61739 1091 aa20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Atxn2lQ7TQH0 1049 aaKnown RBP20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Tmem87bQ8BKU8 555 aa20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Nphp1Q9QY53 687 aa20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Znf609Q8BZ47 1413 aa20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Hs1bp3Q3TC93 395 aa20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Strip1Q8C079 837 aa20.5■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Prl3d3A0A0M6L0J6 224 aa20.49■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Eva1cP58659 440 aa20.48■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Gja5Q01231 358 aa20.48■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Mcmdc2E9Q956 681 aa20.47■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Rtn4Q99P72 1162 aaKnown RBP20.47■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Cfap44E9Q5M6 1843 aa20.47■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Slc38a10Q5I012 1090 aa20.47■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Kif2cQ922S8 721 aa20.47■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Mtcl1Q3UHU5 1945 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Abcc4E9Q236 1325 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Sh3tc1G3X9F6 1346 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 EappQ5BU09 281 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Wwc1Q5SXA9 1104 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Znrd1-asQ8R0E5 213 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Zbtb3Q91X45 518 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Lgr5Q9Z1P4 907 aa20.46■□□□□ 0.87
Nr1h3-202ENSMUST00000111354 Sult6b1P0CC03 303 aa20.45■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Atg9aQ68FE2 551 aa20.45■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Dhx38Q80X98 1228 aa20.45■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Q8C5K5 320 aa20.45■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Smc5Q8CG46 1101 aaKnown RBP20.45■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Rbm5Q91YE7 815 aaKnown RBP20.45■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 LratQ9JI60 231 aa20.45■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Ets1P27577 440 aa20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Snrpa1P57784 255 aaKnown RBP20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Gm7347D3YYI9 267 aa20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Speer4aF8VPX6 267 aa20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Gpr182P43142 395 aa20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Tango6Q8C3S2 1079 aa20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 FanclQ9CR14 375 aa20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 CarsQ9ER72 831 aaKnown RBP20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Nup188Q6ZQH8 1759 aa20.44■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Atp6v0a2P15920 856 aa20.43■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 SkilQ60665 675 aa20.43■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Slc39a11Q8BWY7 342 aa20.43■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Q8C6G1 249 aa20.43■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Ncoa5Q91W39 579 aaKnown RBP20.43■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Eya2O08575 532 aa20.42■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 AppP12023 770 aa20.42■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 VeztQ3ZK22 780 aa20.42■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Rbm27Q5SFM8 1060 aaKnown RBP20.42■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Golgb1E9PVZ8 3238 aa20.42■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Atg4a-psA0A0G2JFS9 396 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Cfap70D3YVL2 1141 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Bin2D3Z6Q9 489 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Anxa1P10107 346 aaKnown RBP20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Ftl2P49945 183 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Fhdc1Q3ULZ2 1149 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Atg4aQ8C9S8 396 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Dis3l2Q8CI75 870 aaKnown RBP20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Smarca5Q91ZW3 1051 aaKnown RBP20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Ciao1Q99KN2 339 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Chmp3Q9CQ10 224 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Popdc2Q9ES82 367 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Znfx1Q8R151 1909 aaKnown RBP20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Col3a1P08121 1464 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Myo3bQ1EG27 1305 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Ube4aE9Q735 1028 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 En2P09066 324 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 LifrP42703 1092 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 IarsQ8BU30 1262 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Sde2Q8K1J5 448 aaKnown RBP20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Atl3Q91YH5 541 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Adarb2Q9JI20 745 aa20.41■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 EvplQ9D952 2035 aa20.4■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Psd3Q2PFD7 1037 aa20.4■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Edc3Q8K2D3 508 aaKnown RBP20.4■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Tmc2Q8R4P4 888 aa20.4■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Kcnq2Q9Z351 759 aa20.4■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Heg1E9Q7X6 1337 aa20.4■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Scn11aQ9R053 1765 aa20.4■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 SafbD3YXK2 937 aaKnown RBP20.39■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 Lmnb1P14733 588 aaKnown RBP20.39■□□□□ 0.86
Nr1h3-202ENSMUST00000111354 1700029H14RikE9PY36 240 aa20.39■□□□□ 0.85
Nr1h3-202ENSMUST00000111354 Rps8P62242 208 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms