RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 RtcbQ99LF4 505 aaKnown RBP12.92□□□□□ -0.34
Trim61-201ENSMUST00000078409 Atg3Q9CPX6 314 aa12.92□□□□□ -0.34
Trim61-201ENSMUST00000078409 Dnai1Q8C0M8 701 aa12.92□□□□□ -0.34
Trim61-201ENSMUST00000078409 Vps53Q8CCB4 832 aa12.92□□□□□ -0.34
Trim61-201ENSMUST00000078409 Ccdc73Q8CDM4 1066 aa12.92□□□□□ -0.34
Trim61-201ENSMUST00000078409 Klhdc4Q921I2 584 aa12.92□□□□□ -0.34
Trim61-201ENSMUST00000078409 Q9CYI0 393 aa12.92□□□□□ -0.34
Trim61-201ENSMUST00000078409 Col24a1Q30D77 1733 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Impdh2P24547 514 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Fbxw10Q5SUS0 1030 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Asic4Q7TNS7 539 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Ints5Q8CHT3 1018 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Ssfa2Q922B9 1252 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Iqca1Q9CUL5 857 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Smc3Q9CW03 1217 aaKnown RBP12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 Kndc1Q0KK55 1742 aa12.91□□□□□ -0.34
Trim61-201ENSMUST00000078409 MsnP26041 577 aaKnown RBP12.9□□□□□ -0.34
Trim61-201ENSMUST00000078409 Nedd4P46935 887 aaKnown RBP12.9□□□□□ -0.34
Trim61-201ENSMUST00000078409 1810065E05RikQ5NC41 235 aa12.9□□□□□ -0.34
Trim61-201ENSMUST00000078409 Phkg2Q9DB30 406 aa12.9□□□□□ -0.34
Trim61-201ENSMUST00000078409 Sos1Q62245 1319 aa12.9□□□□□ -0.34
Trim61-201ENSMUST00000078409 Dcaf5Q80T85 946 aa12.89□□□□□ -0.35
Trim61-201ENSMUST00000078409 PdiltQ9DAN1 588 aa12.89□□□□□ -0.35
Trim61-201ENSMUST00000078409 Eif4a2P10630 407 aa12.89□□□□□ -0.35
Trim61-201ENSMUST00000078409 Mex3cQ05A36 652 aaKnown RBP12.89□□□□□ -0.35
Trim61-201ENSMUST00000078409 Miga2Q8BK03 593 aa12.89□□□□□ -0.35
Trim61-201ENSMUST00000078409 Suds3Q8BR65 328 aa12.89□□□□□ -0.35
Trim61-201ENSMUST00000078409 Anapc15-psA0A140T8L6 141 aa12.88□□□□□ -0.35
Trim61-201ENSMUST00000078409 Mkrn3Q60764 544 aa12.88□□□□□ -0.35
Trim61-201ENSMUST00000078409 Ctage5Q8R311 779 aa12.88□□□□□ -0.35
Trim61-201ENSMUST00000078409 Wdr78E9PYY5 807 aa12.87□□□□□ -0.35
Trim61-201ENSMUST00000078409 Paxbp1P58501 919 aa12.87□□□□□ -0.35
Trim61-201ENSMUST00000078409 Rbm46P86049 533 aa12.87□□□□□ -0.35
Trim61-201ENSMUST00000078409 Clec4gQ8BNX1 294 aa12.87□□□□□ -0.35
Trim61-201ENSMUST00000078409 Becn1O88597 448 aa12.87□□□□□ -0.35
Trim61-201ENSMUST00000078409 Tlr8P58682 1032 aa12.87□□□□□ -0.35
Trim61-201ENSMUST00000078409 Amhr2Q8K592 568 aa12.87□□□□□ -0.35
Trim61-201ENSMUST00000078409 PgfP49764 158 aa12.86□□□□□ -0.35
Trim61-201ENSMUST00000078409 SobpQ0P5V2 864 aa12.86□□□□□ -0.35
Trim61-201ENSMUST00000078409 Gja3Q64448 417 aa12.86□□□□□ -0.35
Trim61-201ENSMUST00000078409 Plekhg5Q66T02 1073 aa12.86□□□□□ -0.35
Trim61-201ENSMUST00000078409 B4galnt4Q766D5 1034 aa12.86□□□□□ -0.35
Trim61-201ENSMUST00000078409 Pdzd9Q9D9M4 266 aa12.86□□□□□ -0.35
Trim61-201ENSMUST00000078409 Spef2Q8C9J3 1734 aa12.86□□□□□ -0.35
Trim61-201ENSMUST00000078409 Kcnb1Q03717 857 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Mum1l1Q4VA55 681 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Klra3Q64329 266 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Smc2Q8CG48 1191 aaKnown RBP12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 TraipQ8VIG6 470 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 SufuQ9Z0P7 484 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Zfyve27Q3TXX3 415 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Lrrc43Q3V0L5 667 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Wwc2Q6NXJ0 1187 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Bank1Q80VH0 783 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 IarsQ8BU30 1262 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Phc3Q8CHP6 981 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Chmp7Q8R1T1 451 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Cap2Q9CYT6 476 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Mtmr7Q9Z2C9 660 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Ubr2Q6WKZ8 1755 aa12.85□□□□□ -0.35
Trim61-201ENSMUST00000078409 Dnai2A2AC93 623 aa12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Tpm3P21107 285 aaKnown RBP12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Cdkn1cP49919 348 aa12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Rad50P70388 1312 aa12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Cct2P80314 535 aaKnown RBP12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Atl2Q6PA06 583 aa12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Smc4Q8CG47 1286 aa12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Zkscan3Q91VW9 553 aa12.84□□□□□ -0.35
Trim61-201ENSMUST00000078409 Ca8P28651 291 aa12.83□□□□□ -0.35
Trim61-201ENSMUST00000078409 Wdhd1P59328 1117 aa12.83□□□□□ -0.35
Trim61-201ENSMUST00000078409 Atp2b3Q0VF55 1220 aa12.83□□□□□ -0.35
Trim61-201ENSMUST00000078409 Pik3ap1Q9EQ32 811 aa12.83□□□□□ -0.35
Trim61-201ENSMUST00000078409 Tnpo1Q8BFY9 898 aaKnown RBP12.83□□□□□ -0.36
Trim61-201ENSMUST00000078409 HmcesQ8R1M0 353 aaKnown RBP12.83□□□□□ -0.36
Trim61-201ENSMUST00000078409 Zfyve19Q9DAZ9 389 aa12.83□□□□□ -0.36
Trim61-201ENSMUST00000078409 Atp1a4Q9WV27 1032 aa12.83□□□□□ -0.36
Trim61-201ENSMUST00000078409 Gsdma3Q5Y4Y6 464 aa12.82□□□□□ -0.36
Trim61-201ENSMUST00000078409 Rsph6aQ8CDR2 708 aa12.82□□□□□ -0.36
Trim61-201ENSMUST00000078409 Cgref1Q8R1U2 281 aa12.82□□□□□ -0.36
Trim61-201ENSMUST00000078409 Col4a5Q63ZW6 1691 aa12.82□□□□□ -0.36
Trim61-201ENSMUST00000078409 Mcm6P97311 821 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Zrsr2Q62377 462 aaKnown RBP12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Brsk2Q69Z98 735 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Tango6Q8C3S2 1079 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Q8VDP2 222 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 SarnpQ9D1J3 210 aaKnown RBP12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Saal1Q9D2C2 474 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 AatfQ9JKX4 526 aaKnown RBP12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Klrk1O54709 232 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 MecomP14404 1042 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Lmnb1P14733 588 aaKnown RBP12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Il4rP16382 810 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Kif3aP28741 701 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Lrriq3Q14DL3 633 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Klra9Q2TJJ8 266 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Smg7Q5RJH6 1138 aaKnown RBP12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Gtpbp10Q8K013 366 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Fbxo33Q8VE08 562 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Klf15Q9EPW2 415 aa12.81□□□□□ -0.36
Trim61-201ENSMUST00000078409 Klra10Q9R1G6 266 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 141.3 ms