RNA–Protein interactions for RNA: ENSMUST00000022977.13

Sqle-201, Transcript of Squalene monooxygenase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqle, Length 2,758 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqle-201ENSMUST00000022977 Il1rapl2Q9ERS6 686 aa16.46■□□□□ 0.23
Sqle-201ENSMUST00000022977 Bag3Q9JLV1 577 aaKnown RBP16.46■□□□□ 0.23
Sqle-201ENSMUST00000022977 Rrs1Q9CYH6 365 aaKnown RBP16.46■□□□□ 0.23
Sqle-201ENSMUST00000022977 Trip6Q9Z1Y4 480 aa16.46■□□□□ 0.23
Sqle-201ENSMUST00000022977 Catsper2A2ARP9 588 aa16.45■□□□□ 0.22
Sqle-201ENSMUST00000022977 Gnl3lQ6PGG6 577 aaKnown RBP16.45■□□□□ 0.22
Sqle-201ENSMUST00000022977 Prl3d3A0A0M6L0J6 224 aa16.45■□□□□ 0.22
Sqle-201ENSMUST00000022977 Q8BT18 775 aa16.45■□□□□ 0.22
Sqle-201ENSMUST00000022977 Chmp3Q9CQ10 224 aa16.45■□□□□ 0.22
Sqle-201ENSMUST00000022977 Rapgef4Q9EQZ6 1011 aa16.45■□□□□ 0.22
Sqle-201ENSMUST00000022977 Brpf1B2RRD7 1212 aa16.44■□□□□ 0.22
Sqle-201ENSMUST00000022977 Nol8Q3UHX0 1147 aaKnown RBP16.44■□□□□ 0.22
Sqle-201ENSMUST00000022977 Rps6ka4Q9Z2B9 773 aa16.44■□□□□ 0.22
Sqle-201ENSMUST00000022977 Rfx1P48377 963 aa16.44■□□□□ 0.22
Sqle-201ENSMUST00000022977 Ncoa5Q91W39 579 aaKnown RBP16.44■□□□□ 0.22
Sqle-201ENSMUST00000022977 Ccdc9Q8VC31 543 aaKnown RBP16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Abca3Q8R420 1704 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Prl3d2F6R3P9 224 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Terf2O35144 541 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Timm10P62073 90 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Mre11Q61216 706 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Esco1Q69Z69 843 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Lrit1Q8K099 624 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Pmfbp1Q9WVQ0 1022 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 AtrnQ9WU60 1428 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Anxa1P10107 346 aaKnown RBP16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 NexnQ7TPW1 607 aa16.43■□□□□ 0.22
Sqle-201ENSMUST00000022977 Noc3lQ8VI84 807 aaKnown RBP16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Ppfibp2O35711 882 aa16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Cops6O88545 324 aa16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Slf2Q6P9P0 1278 aa16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Tmc2Q8R4P4 888 aa16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Dmrtc1Q9D9R7 182 aa16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Mlh1Q9JK91 760 aa16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Arap2Q8BZ05 1703 aa16.42■□□□□ 0.22
Sqle-201ENSMUST00000022977 Zkscan16A2ALW2 728 aa16.41■□□□□ 0.22
Sqle-201ENSMUST00000022977 Dctn1O08788 1281 aa16.41■□□□□ 0.22
Sqle-201ENSMUST00000022977 DaxxO35613 739 aa16.41■□□□□ 0.22
Sqle-201ENSMUST00000022977 Gm13023A2A8N2 498 aa16.41■□□□□ 0.22
Sqle-201ENSMUST00000022977 Vps54Q5SPW0 977 aa16.41■□□□□ 0.22
Sqle-201ENSMUST00000022977 Susd4Q8BH32 490 aa16.41■□□□□ 0.22
Sqle-201ENSMUST00000022977 Cyp2c23E9Q5K4 494 aa16.4■□□□□ 0.22
Sqle-201ENSMUST00000022977 4933416C03RikQ3V063 378 aa16.4■□□□□ 0.22
Sqle-201ENSMUST00000022977 Smc4Q8CG47 1286 aa16.4■□□□□ 0.22
Sqle-201ENSMUST00000022977 4930523C07RikE9Q2T4 99 aa16.4■□□□□ 0.22
Sqle-201ENSMUST00000022977 Eya2O08575 532 aa16.4■□□□□ 0.22
Sqle-201ENSMUST00000022977 Smarcc1P97496 1104 aa16.4■□□□□ 0.22
Sqle-201ENSMUST00000022977 Taok3Q8BYC6 898 aa16.4■□□□□ 0.22
Sqle-201ENSMUST00000022977 Gtf3c3Q3TMP1 882 aa16.39■□□□□ 0.21
Sqle-201ENSMUST00000022977 Foxo4Q9WVH3 505 aa16.39■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ankrd31A0A140LI88 1765 aa16.39■□□□□ 0.21
Sqle-201ENSMUST00000022977 Cyp7a1Q64505 503 aa16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 Jakmip1Q8BVL9 626 aa16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 Chmp4cQ9D7F7 232 aa16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 Fkbp1aP26883 108 aaKnown RBP16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 Nlrp1aQ2LKU9 1182 aa16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 NfkbibQ60778 359 aa16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 Gpr182P43142 395 aa16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ppp4r3aQ6P2K6 820 aa16.38■□□□□ 0.21
Sqle-201ENSMUST00000022977 Plcb3P51432 1234 aaKnown RBP16.37■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ifit1bl2Q3U687 466 aa16.37■□□□□ 0.21
Sqle-201ENSMUST00000022977 Rnf123Q5XPI3 1314 aa16.37■□□□□ 0.21
Sqle-201ENSMUST00000022977 Hoxa7P02830 229 aa16.37■□□□□ 0.21
Sqle-201ENSMUST00000022977 Irx3P81067 507 aa16.37■□□□□ 0.21
Sqle-201ENSMUST00000022977 Kiaa0319lQ8K135 1048 aa16.37■□□□□ 0.21
Sqle-201ENSMUST00000022977 Zbtb38Q3LR78 1197 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Nol10Q5RJG1 687 aaKnown RBP16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 1700010I14RikQ7TPG0 532 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Rab3gap1Q80UJ7 981 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Greb1lB9EJV3 1913 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Myh1Q5SX40 1942 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ms4a2P20490 235 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Snai1Q02085 264 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Fam102bQ8BQS4 339 aa16.36■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ftl2P49945 183 aa16.35■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ddx46Q569Z5 1032 aaKnown RBP16.35■□□□□ 0.21
Sqle-201ENSMUST00000022977 Dmrt2Q8BG36 561 aa16.35■□□□□ 0.21
Sqle-201ENSMUST00000022977 Rbbp8nlA2ABX0 614 aa16.35■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ppfia1B2RXQ2 1266 aa16.35■□□□□ 0.21
Sqle-201ENSMUST00000022977 Mdm2P23804 489 aa16.35■□□□□ 0.21
Sqle-201ENSMUST00000022977 Amer1Q7TS75 1132 aa16.35■□□□□ 0.21
Sqle-201ENSMUST00000022977 Slc4a1P04919 929 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 NpeppsQ11011 920 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Zkscan8Q8BSL0 588 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Kdm4cQ8VCD7 1054 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Trim34aQ99PP6 485 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Zcrb1Q9CZ96 217 aaKnown RBP16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Tktl2Q9D4D4 627 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Cyp27a1Q9DBG1 533 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Arhgap33Q80YF9 1305 aa16.34■□□□□ 0.21
Sqle-201ENSMUST00000022977 Srp68Q8BMA6 625 aaKnown RBP16.33■□□□□ 0.21
Sqle-201ENSMUST00000022977 Afg3l2Q8JZQ2 802 aaKnown RBP16.33■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ciao1Q99KN2 339 aa16.33■□□□□ 0.21
Sqle-201ENSMUST00000022977 NgdnQ9DB96 315 aaKnown RBP16.33■□□□□ 0.21
Sqle-201ENSMUST00000022977 Ccne2Q9Z238 404 aa16.33■□□□□ 0.21
Sqle-201ENSMUST00000022977 Atp1b3P97370 278 aa16.33■□□□□ 0.2
Sqle-201ENSMUST00000022977 Itga6Q61739 1091 aa16.33■□□□□ 0.2
Sqle-201ENSMUST00000022977 Ltv1Q6NSQ7 470 aaKnown RBP16.33■□□□□ 0.2
Sqle-201ENSMUST00000022977 Top1mtQ8R4U6 593 aa16.33■□□□□ 0.2
Sqle-201ENSMUST00000022977 Pus3Q9JI38 481 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms