RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 RTN4RQ9BZR6 473 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 RNF122Q9H9V4 155 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 LRTM1Q9HBL6 345 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 BEX4Q9NWD9 120 aaPredicted RBP12.68□□□□□ -0.38
HDAC5-203ENST00000586339 ELOVL5Q9NYP7 299 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 FLRT3Q9NZU0 649 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 NTMQ9P121 344 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 STOML1Q9UBI4 398 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 TMED5Q9Y3A6 229 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 ZNF337Q9Y3M9 751 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 PRR14LQ5THK1 2151 aa12.68□□□□□ -0.38
HDAC5-203ENST00000586339 FREM1Q5H8C1 2179 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 TLDC2A0PJX2 215 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 ALG1L2C9J202 215 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 H3BML4 177 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 AZIN1O14977 448 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 SMNDC1O75940 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 NKX2-2O95096 273 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 ANGPTL1O95841 491 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 CHEK2O96017 543 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 CD8BP10966 210 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 PRPS2P11908 318 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 DDX5P17844 614 aaKnown RBP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 KRT4P19013 534 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 CD53P19397 219 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 LCN1P31025 176 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 GABRA3P34903 492 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 GPC1P35052 558 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 KIR2DL2P43627 348 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 CLDN15P56746 228 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 SLC18A2Q05940 514 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 HSPB3Q12988 150 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 PDE7AQ13946 482 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 CLEC6AQ6EIG7 209 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 VWA1Q6PCB0 445 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 ZNF551Q7Z340 670 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 MARCH3Q86UD3 253 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 AENQ8WTP8 325 aaKnown RBP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 DUSP19Q8WTR2 217 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 FIG4Q92562 907 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 PPCDCQ96CD2 204 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 PGM2Q96G03 612 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 ZNF845Q96IR2 970 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 MS4A4EQ96PG1 132 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 SLC39A3Q9BRY0 314 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 REEP4Q9H6H4 257 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 NEUROD4Q9HD90 331 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 ACSS1Q9NUB1 689 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-203ENST00000586339 MKS1Q9NXB0 559 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
HDAC5-203ENST00000586339 A0A087WZY1 265 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 SEC14L5O43304 696 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 CTIFO43310 598 aaKnown RBP12.66□□□□□ -0.38
HDAC5-203ENST00000586339 DIAPH2O60879 1101 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 SLU7O95391 586 aaKnown RBP12.66□□□□□ -0.38
HDAC5-203ENST00000586339 NUDT17P0C025 328 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 SDC1P18827 310 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 HOXC12P31275 282 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 ASMTP46597 345 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 RFX3P48380 749 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 SUCLG1P53597 346 aaKnown RBP12.66□□□□□ -0.38
HDAC5-203ENST00000586339 PON3Q15166 354 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 POU4F3Q15319 338 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 GUSBP1Q15486 140 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.66□□□□□ -0.38
HDAC5-203ENST00000586339 TMEM44Q2T9K0 475 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 GRAMD1BQ3KR37 738 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 ZCCHC12Q6PEW1 402 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 Q6ZSR9 355 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 BTLAQ7Z6A9 289 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 FNDC9Q8TBE3 224 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 GPR151Q8TDV0 419 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 CAVIN3Q969G5 261 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 MTERF3Q96E29 417 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 FAM111AQ96PZ2 611 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 EQTNQ9NQ60 294 aa12.66□□□□□ -0.38
HDAC5-203ENST00000586339 PAQR5Q9NXK6 330 aaPredicted RBP12.66□□□□□ -0.38
HDAC5-203ENST00000586339 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 GXYLT2A0PJZ3 443 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 C7orf72A4D263 438 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 H0YC42 278 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 LSM1O15116 133 aaKnown RBP12.65□□□□□ -0.38
HDAC5-203ENST00000586339 TRIM13O60858 407 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 OXSR1O95747 527 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-203ENST00000586339 HSPA4LO95757 839 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 CGAP01215 116 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 IGKV1D-16P01601 117 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 POU2F1P14859 743 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 CRYGSP22914 178 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 CCKARP32238 428 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 UGT2B10P36537 528 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 MANFP55145 182 aaKnown RBP12.65□□□□□ -0.38
HDAC5-203ENST00000586339 TPD52P55327 224 aaPredicted RBP12.65□□□□□ -0.38
HDAC5-203ENST00000586339 CLDN20P56880 219 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 SIRPAP78324 504 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 FAM27E3Q08E93 113 aa12.65□□□□□ -0.38
HDAC5-203ENST00000586339 PCLAFQ15004 111 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms