RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A GUP1P53154 560 aa9.04□□□□□ -0.96
TGA1tA(UGC)A MNP1P53163 194 aaPredicted RBP9.04□□□□□ -0.96
TGA1tA(UGC)A YNL146WP53906 100 aa9.04□□□□□ -0.96
TGA1tA(UGC)A EMI2Q04409 500 aaKnown RBP9.04□□□□□ -0.96
TGA1tA(UGC)A MAG2Q06436 670 aaKnown RBP9.04□□□□□ -0.96
TGA1tA(UGC)A MSD1P15179 658 aaKnown RBP9.03□□□□□ -0.96
TGA1tA(UGC)A GLN3P18494 730 aa9.03□□□□□ -0.96
TGA1tA(UGC)A RPT1P33299 467 aaKnown RBP9.03□□□□□ -0.96
TGA1tA(UGC)A DID4P36108 232 aa9.03□□□□□ -0.96
TGA1tA(UGC)A YHL026CP38740 315 aa9.03□□□□□ -0.96
TGA1tA(UGC)A MCM6P53091 1017 aaKnown RBP9.03□□□□□ -0.96
TGA1tA(UGC)A ENV11P53246 860 aa9.03□□□□□ -0.96
TGA1tA(UGC)A RTT102P53330 157 aa9.03□□□□□ -0.96
TGA1tA(UGC)A COG8Q04632 607 aa9.03□□□□□ -0.96
TGA1tA(UGC)A CUR1Q06469 252 aa9.03□□□□□ -0.96
TGA1tA(UGC)A NOC3Q07896 663 aaPredicted RBP9.03□□□□□ -0.96
TGA1tA(UGC)A PCD1Q12524 340 aa9.03□□□□□ -0.96
TGA1tA(UGC)A BMH1P29311 267 aaKnown RBP9.02□□□□□ -0.97
TGA1tA(UGC)A YSC83P32792 385 aa9.02□□□□□ -0.97
TGA1tA(UGC)A BUD2P33314 1104 aa9.02□□□□□ -0.97
TGA1tA(UGC)A MET13P53128 600 aa9.02□□□□□ -0.97
TGA1tA(UGC)A TAM41P53230 385 aa9.02□□□□□ -0.97
TGA1tA(UGC)A YNL034WP53963 612 aa9.02□□□□□ -0.97
TGA1tA(UGC)A YNL018CP53976 612 aa9.02□□□□□ -0.97
TGA1tA(UGC)A DOT1Q04089 582 aaKnown RBP9.02□□□□□ -0.97
TGA1tA(UGC)A ECM7Q06200 448 aa9.02□□□□□ -0.97
TGA1tA(UGC)A TOR2P32600 2474 aaKnown RBP9.02□□□□□ -0.97
TGA1tA(UGC)A YMR084WA2P2R3 262 aa9.01□□□□□ -0.97
TGA1tA(UGC)A POL3P15436 1097 aa9.01□□□□□ -0.97
TGA1tA(UGC)A HIR1P32479 840 aa9.01□□□□□ -0.97
TGA1tA(UGC)A ATG19P35193 415 aa9.01□□□□□ -0.97
TGA1tA(UGC)A MNN4P36044 1178 aa9.01□□□□□ -0.97
TGA1tA(UGC)A HYR1P40581 163 aaKnown RBP9.01□□□□□ -0.97
TGA1tA(UGC)A VTC2P43585 828 aa9.01□□□□□ -0.97
TGA1tA(UGC)A INP52P50942 1183 aa9.01□□□□□ -0.97
TGA1tA(UGC)A YLR455WQ06188 304 aa9.01□□□□□ -0.97
TGA1tA(UGC)A DBP5P20449 482 aaKnown RBP9□□□□□ -0.97
TGA1tA(UGC)A RPC53P25441 422 aa9□□□□□ -0.97
TGA1tA(UGC)A RAM2P29703 316 aa9□□□□□ -0.97
TGA1tA(UGC)A BIO2P32451 375 aa9□□□□□ -0.97
TGA1tA(UGC)A YNL134CP53912 376 aaKnown RBP9□□□□□ -0.97
TGA1tA(UGC)A SEC5P89102 971 aa9□□□□□ -0.97
TGA1tA(UGC)A CDC53Q12018 815 aaKnown RBP9□□□□□ -0.97
TGA1tA(UGC)A ADE4P04046 510 aaKnown RBP8.99□□□□□ -0.97
TGA1tA(UGC)A PCK1P10963 549 aa8.99□□□□□ -0.97
TGA1tA(UGC)A URK1P27515 501 aa8.99□□□□□ -0.97
TGA1tA(UGC)A YEL1P34225 687 aa8.99□□□□□ -0.97
TGA1tA(UGC)A MRX3P38172 270 aa8.99□□□□□ -0.97
TGA1tA(UGC)A YHR131CP38835 850 aa8.99□□□□□ -0.97
TGA1tA(UGC)A BDH2P39713 417 aa8.99□□□□□ -0.97
TGA1tA(UGC)A FMP10P40098 244 aa8.99□□□□□ -0.97
TGA1tA(UGC)A ESL1P40456 1118 aa8.99□□□□□ -0.97
TGA1tA(UGC)A CUL3P53202 744 aa8.99□□□□□ -0.97
TGA1tA(UGC)A PNG1Q02890 363 aa8.99□□□□□ -0.97
TGA1tA(UGC)A SPP1Q03012 353 aa8.99□□□□□ -0.97
TGA1tA(UGC)A PEX19Q07418 342 aa8.99□□□□□ -0.97
TGA1tA(UGC)A LAA1P39526 2014 aa8.98□□□□□ -0.97
TGA1tA(UGC)A NAM7P30771 971 aaKnown RBP8.98□□□□□ -0.97
TGA1tA(UGC)A BUD16P39988 312 aa8.98□□□□□ -0.97
TGA1tA(UGC)A HUL4P40985 892 aa8.98□□□□□ -0.97
TGA1tA(UGC)A YFL052WP43551 465 aa8.98□□□□□ -0.97
TGA1tA(UGC)A HST1P53685 503 aa8.98□□□□□ -0.97
TGA1tA(UGC)A TOF1P53840 1238 aa8.98□□□□□ -0.97
TGA1tA(UGC)A VTC3Q02725 835 aa8.98□□□□□ -0.97
TGA1tA(UGC)A TCO89Q08921 799 aa8.98□□□□□ -0.97
TGA1tA(UGC)A YOR022CQ12204 715 aa8.98□□□□□ -0.97
TGA1tA(UGC)A LSP1Q12230 341 aaKnown RBP8.98□□□□□ -0.97
TGA1tA(UGC)A ZPS1Q12512 249 aa8.98□□□□□ -0.97
TGA1tA(UGC)A RPL22AP05749 121 aaKnown RBP8.97□□□□□ -0.97
TGA1tA(UGC)A TOM70P07213 617 aaKnown RBP8.97□□□□□ -0.97
TGA1tA(UGC)A ELM1P32801 640 aa8.97□□□□□ -0.97
TGA1tA(UGC)A PPS1P38148 807 aa8.97□□□□□ -0.97
TGA1tA(UGC)A RFS1P38234 210 aaKnown RBP8.97□□□□□ -0.97
TGA1tA(UGC)A VID24P38263 362 aa8.97□□□□□ -0.97
TGA1tA(UGC)A BIM1P40013 344 aa8.97□□□□□ -0.97
TGA1tA(UGC)A LAM5P43560 674 aa8.97□□□□□ -0.97
TGA1tA(UGC)A NBP1P52919 319 aaPredicted RBP8.97□□□□□ -0.97
TGA1tA(UGC)A TPO2P53283 614 aa8.97□□□□□ -0.97
TGA1tA(UGC)A YPL277CQ08989 487 aa8.97□□□□□ -0.97
TGA1tA(UGC)A PRC1P00729 532 aa8.96□□□□□ -0.98
TGA1tA(UGC)A SPT2P06843 333 aaPredicted RBP8.96□□□□□ -0.98
TGA1tA(UGC)A IDI1P15496 288 aa8.96□□□□□ -0.98
TGA1tA(UGC)A MRPL7P36519 292 aa8.96□□□□□ -0.98
TGA1tA(UGC)A APN2P38207 520 aa8.96□□□□□ -0.98
TGA1tA(UGC)A SNF7P39929 240 aaKnown RBP8.96□□□□□ -0.98
TGA1tA(UGC)A ISM1P48526 1002 aa8.96□□□□□ -0.98
TGA1tA(UGC)A HEH2Q03281 663 aa8.96□□□□□ -0.98
TGA1tA(UGC)A TRS130Q03660 1102 aa8.96□□□□□ -0.98
TGA1tA(UGC)A OSW2Q12202 724 aa8.96□□□□□ -0.98
TGA1tA(UGC)A ADK2P26364 225 aa8.95□□□□□ -0.98
TGA1tA(UGC)A VPS35P34110 944 aa8.95□□□□□ -0.98
TGA1tA(UGC)A YER186CP40101 306 aa8.95□□□□□ -0.98
TGA1tA(UGC)A ORC5P50874 479 aa8.95□□□□□ -0.98
TGA1tA(UGC)A YDR090CQ03193 310 aa8.95□□□□□ -0.98
TGA1tA(UGC)A PSR2Q07949 397 aa8.95□□□□□ -0.98
TGA1tA(UGC)A DDP1Q99321 188 aaKnown RBP8.95□□□□□ -0.98
TGA1tA(UGC)A PHO8P11491 566 aa8.94□□□□□ -0.98
TGA1tA(UGC)A TRK2P28584 889 aa8.94□□□□□ -0.98
TGA1tA(UGC)A SKG6P32900 734 aaPredicted RBP8.94□□□□□ -0.98
TGA1tA(UGC)A UBP13P38187 747 aa8.94□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms