RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	HRQ1	Q05549	1077 aa		5.31	□□□□□ -1.56
FDH2	YPL275W	MYO4	P32492	1471 aa		5.31	□□□□□ -1.56
FDH2	YPL275W	ELM1	P32801	640 aa		5.3	□□□□□ -1.56
FDH2	YPL275W	PBY1	P38254	753 aa		5.3	□□□□□ -1.56
FDH2	YPL275W	RRT14	P40470	206 aa		5.3	□□□□□ -1.56
FDH2	YPL275W	PFD1	P46988	109 aa		5.3	□□□□□ -1.56
FDH2	YPL275W	YJL049W	P47048	450 aa		5.3	□□□□□ -1.56
FDH2	YPL275W	AVT1	P47082	602 aa		5.3	□□□□□ -1.56
FDH2	YPL275W	NAN1	Q02931	896 aa	Known RBP	5.3	□□□□□ -1.56
FDH2	YPL275W	RSB1	Q08417	382 aa		5.3	□□□□□ -1.56
FDH2	YPL275W	WRS1	Q12109	432 aa	Known RBP	5.3	□□□□□ -1.56
FDH2	YPL275W	THS1	P04801	734 aa	Known RBP	5.29	□□□□□ -1.56
FDH2	YPL275W	ACE2	P21192	770 aa		5.29	□□□□□ -1.56
FDH2	YPL275W	GRX1	P25373	110 aa	Known RBP	5.29	□□□□□ -1.56
FDH2	YPL275W	CDC12	P32468	407 aa	Known RBP	5.29	□□□□□ -1.56
FDH2	YPL275W	SEG2	P34250	1132 aa		5.29	□□□□□ -1.56
FDH2	YPL275W	IRR1	P40541	1150 aa		5.29	□□□□□ -1.56
FDH2	YPL275W	SIZ1	Q04195	904 aa		5.29	□□□□□ -1.56
FDH2	YPL275W	CDA2	Q06703	312 aa		5.29	□□□□□ -1.56
FDH2	YPL275W	YLL058W	Q12198	575 aa		5.29	□□□□□ -1.56
FDH2	YPL275W	SVS1	Q12254	260 aa		5.29	□□□□□ -1.56
FDH2	YPL275W	SNQ2	P32568	1501 aa	Known RBP	5.28	□□□□□ -1.56
FDH2	YPL275W	YBR184W	P38299	523 aa		5.28	□□□□□ -1.56
FDH2	YPL275W	ETP1	P38748	585 aa	Known RBP	5.28	□□□□□ -1.56
FDH2	YPL275W	FOL2	P51601	243 aa	Known RBP	5.28	□□□□□ -1.56
FDH2	YPL275W	FMP25	Q08023	583 aa		5.28	□□□□□ -1.56
FDH2	YPL275W	OCA5	P38738	679 aa		5.27	□□□□□ -1.57
FDH2	YPL275W	NNF1	P47149	201 aa		5.27	□□□□□ -1.57
FDH2	YPL275W	HFM1	P51979	1187 aa		5.27	□□□□□ -1.57
FDH2	YPL275W	TRM3	Q07527	1436 aa		5.26	□□□□□ -1.57
FDH2	YPL275W	SRM1	P21827	482 aa		5.26	□□□□□ -1.57
FDH2	YPL275W	RFC5	P38251	354 aa		5.26	□□□□□ -1.57
FDH2	YPL275W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
FDH2	YPL275W	MDM38	Q08179	573 aa		5.26	□□□□□ -1.57
FDH2	YPL275W	RAD4	P14736	754 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	RNQ1	P25367	405 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	HBS1	P32769	611 aa	Known RBP	5.25	□□□□□ -1.57
FDH2	YPL275W	GIC1	P38785	314 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	NPP2	P39997	493 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	NIT1	P40447	199 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	MRPL22	P53881	309 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	YDR132C	Q03900	495 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	PDR10	P51533	1564 aa		5.25	□□□□□ -1.57
FDH2	YPL275W	RPL8B	P29453	256 aa	Known RBP	5.24	□□□□□ -1.57
FDH2	YPL275W	FUN30	P31380	1131 aa		5.24	□□□□□ -1.57
FDH2	YPL275W	AFR1	P33304	620 aa		5.24	□□□□□ -1.57
FDH2	YPL275W	YHR020W	P38708	688 aa	Known RBP	5.24	□□□□□ -1.57
FDH2	YPL275W	IOC3	P43596	787 aa		5.24	□□□□□ -1.57
FDH2	YPL275W	UTP8	P53276	713 aa	Known RBP	5.24	□□□□□ -1.57
FDH2	YPL275W	SNO2	P53823	222 aa		5.24	□□□□□ -1.57
FDH2	YPL275W	RSM24	Q03976	319 aa		5.24	□□□□□ -1.57
FDH2	YPL275W	DUS3	Q06053	668 aa	Known RBP	5.24	□□□□□ -1.57
FDH2	YPL275W	XYL2	Q07993	356 aa		5.24	□□□□□ -1.57
FDH2	YPL275W	PRP9	P19736	530 aa	Known RBP	5.23	□□□□□ -1.57
FDH2	YPL275W	GAS1	P22146	559 aa	Known RBP	5.23	□□□□□ -1.57
FDH2	YPL275W	YAP1801	P38856	637 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	SIT1	P39980	628 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	SRT1	Q03175	343 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	MSC2	Q03455	724 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	BUL2	Q03758	920 aa	Known RBP	5.23	□□□□□ -1.57
FDH2	YPL275W	NSE3	Q05541	303 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	BDF2	Q07442	638 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	IQG1	Q12280	1495 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	PDR12	Q02785	1511 aa		5.23	□□□□□ -1.57
FDH2	YPL275W	CYC1	P00044	109 aa	Predicted RBP	5.22	□□□□□ -1.57
FDH2	YPL275W	GAL10	P04397	699 aa		5.22	□□□□□ -1.57
FDH2	YPL275W	KIN2	P13186	1147 aa	Known RBP	5.22	□□□□□ -1.57
FDH2	YPL275W	YBR238C	P38330	731 aa	Known RBP	5.22	□□□□□ -1.57
FDH2	YPL275W	SAH1	P39954	449 aa	Known RBP	5.22	□□□□□ -1.57
FDH2	YPL275W	IRC24	P40580	263 aa		5.22	□□□□□ -1.57
FDH2	YPL275W	SRP1	Q02821	542 aa	Known RBP	5.22	□□□□□ -1.57
FDH2	YPL275W	YDR306C	Q06640	478 aa		5.22	□□□□□ -1.57
FDH2	YPL275W	NPP1	P25353	742 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	APL1	P27351	700 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	TSL1	P38427	1098 aa	Known RBP	5.21	□□□□□ -1.58
FDH2	YPL275W	GYP7	P48365	746 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	PRP43	P53131	767 aa	Known RBP	5.21	□□□□□ -1.58
FDH2	YPL275W	ERP6	P53198	216 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	PLB2	Q03674	706 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	SGD1	Q06132	899 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	YOL098C	Q12496	1037 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	GDB1	Q06625	1536 aa		5.21	□□□□□ -1.58
FDH2	YPL275W	STH1	P32597	1359 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	CMP2	P14747	604 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	PRP6	P19735	899 aa	Predicted RBP	5.2	□□□□□ -1.58
FDH2	YPL275W	YKR078W	P36158	585 aa	Known RBP	5.2	□□□□□ -1.58
FDH2	YPL275W	LAM1	P38851	1228 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	ALR2	P43553	858 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	TIM54	P47045	478 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	YKE2	P52553	114 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	HUL5	P53119	910 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	SPO75	Q07798	868 aa		5.2	□□□□□ -1.58
FDH2	YPL275W	PDR15	Q04182	1529 aa	Known RBP	5.19	□□□□□ -1.58
FDH2	YPL275W	DNF3	Q12674	1656 aa		5.19	□□□□□ -1.58
FDH2	YPL275W	CIT1	P00890	479 aa		5.19	□□□□□ -1.58
FDH2	YPL275W	CDC6	P09119	513 aa		5.19	□□□□□ -1.58
FDH2	YPL275W	THI80	P35202	319 aa		5.19	□□□□□ -1.58
FDH2	YPL275W	AIM3	P38266	947 aa	Known RBP	5.19	□□□□□ -1.58
FDH2	YPL275W	RIM8	P53179	542 aa		5.19	□□□□□ -1.58
FDH2	YPL275W	DUS4	Q06063	367 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms