RNA–Protein interactions for RNA: YPL200W

CSM4, Transcript of Protein required for accurate chromosome segregation during meiosis, yeast

Gene CSM4, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM4	YPL200W	RPL8B	P29453	256 aa	Known RBP	4.61	□□□□□ -1.67
CSM4	YPL200W	PPH3	P32345	308 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	AAR2	P32357	355 aa	Predicted RBP	4.61	□□□□□ -1.67
CSM4	YPL200W	TSL1	P38427	1098 aa	Known RBP	4.61	□□□□□ -1.67
CSM4	YPL200W	UTP8	P53276	713 aa	Known RBP	4.61	□□□□□ -1.67
CSM4	YPL200W	ENA2	Q01896	1091 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	YAP6	Q03935	383 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	CDA1	Q06702	301 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	ADY3	Q07732	790 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	TPO1	Q07824	586 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	HMI1	Q12039	706 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	ENA5	Q12691	1091 aa		4.61	□□□□□ -1.67
CSM4	YPL200W	ADE8	P04161	214 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	PRP9	P19736	530 aa	Known RBP	4.6	□□□□□ -1.67
CSM4	YPL200W	HCM1	P25364	564 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	EMC1	P25574	760 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	SRP101	P32916	621 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	TRM2	P33753	639 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	YRO2	P38079	344 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	SIT1	P39980	628 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	ALR2	P43553	858 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	YGR012W	P53206	393 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	SPO75	Q07798	868 aa		4.6	□□□□□ -1.67
CSM4	YPL200W	LST4	P34239	828 aa		4.59	□□□□□ -1.67
CSM4	YPL200W	POA1	P38218	177 aa		4.59	□□□□□ -1.67
CSM4	YPL200W	YER158C	P40095	573 aa		4.59	□□□□□ -1.67
CSM4	YPL200W	MNN10	P50108	393 aa	Known RBP	4.59	□□□□□ -1.67
CSM4	YPL200W	EAF1	Q06337	982 aa		4.59	□□□□□ -1.67
CSM4	YPL200W	UBX5	Q06682	500 aa		4.59	□□□□□ -1.67
CSM4	YPL200W	STE11	P23561	717 aa		4.58	□□□□□ -1.68
CSM4	YPL200W	RPC82	P32349	654 aa		4.58	□□□□□ -1.68
CSM4	YPL200W	YKR078W	P36158	585 aa	Known RBP	4.58	□□□□□ -1.68
CSM4	YPL200W	ERT1	P38140	529 aa		4.58	□□□□□ -1.68
CSM4	YPL200W	MET12	P46151	657 aa		4.58	□□□□□ -1.68
CSM4	YPL200W	YJL049W	P47048	450 aa		4.58	□□□□□ -1.68
CSM4	YPL200W	YKE2	P52553	114 aa		4.58	□□□□□ -1.68
CSM4	YPL200W	BUL2	Q03758	920 aa	Known RBP	4.58	□□□□□ -1.68
CSM4	YPL200W	YLR224W	Q05947	369 aa		4.58	□□□□□ -1.68
CSM4	YPL200W	HSF1	P10961	833 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	ARE1	P25628	610 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	CDC48	P25694	835 aa	Known RBP	4.57	□□□□□ -1.68
CSM4	YPL200W	YBR284W	P38150	797 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	YBR238C	P38330	731 aa	Known RBP	4.57	□□□□□ -1.68
CSM4	YPL200W	YHR020W	P38708	688 aa	Known RBP	4.57	□□□□□ -1.68
CSM4	YPL200W	CCC2	P38995	1004 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	TIM54	P47045	478 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	MSE1	P48525	536 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	ERP6	P53198	216 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	TPO2	P53283	614 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	YPR196W	Q06595	470 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	NOP12	Q08208	459 aa	Known RBP	4.57	□□□□□ -1.68
CSM4	YPL200W	YPR071W	Q12346	211 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	OSH2	Q12451	1283 aa		4.57	□□□□□ -1.68
CSM4	YPL200W	HIS5	P07172	385 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	SPE1	P08432	466 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	CDC11	P32458	415 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	TOK1	P40310	691 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	CHA4	P43634	648 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	NNF1	P47149	201 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	HUL5	P53119	910 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	LCD1	Q04377	747 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	PUS9	Q12069	462 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	HBN1	Q96VH4	193 aa		4.56	□□□□□ -1.68
CSM4	YPL200W	CIT1	P00890	479 aa		4.55	□□□□□ -1.68
CSM4	YPL200W	HSP60	P19882	572 aa	Known RBP	4.55	□□□□□ -1.68
CSM4	YPL200W	PLB1	P39105	664 aa		4.55	□□□□□ -1.68
CSM4	YPL200W	PSP2	P50109	593 aa	Known RBP	4.55	□□□□□ -1.68
CSM4	YPL200W	YGR125W	P53273	1036 aa		4.55	□□□□□ -1.68
CSM4	YPL200W	FLC1	Q08967	793 aa		4.55	□□□□□ -1.68
CSM4	YPL200W	NOT3	P06102	836 aa	Known RBP	4.54	□□□□□ -1.68
CSM4	YPL200W	TOP3	P13099	656 aa		4.54	□□□□□ -1.68
CSM4	YPL200W	AIM21	P40563	679 aa		4.54	□□□□□ -1.68
CSM4	YPL200W	IOC3	P43596	787 aa		4.54	□□□□□ -1.68
CSM4	YPL200W	PHO23	P50947	330 aa		4.54	□□□□□ -1.68
CSM4	YPL200W	URN1	Q06525	465 aa	Known RBP	4.54	□□□□□ -1.68
CSM4	YPL200W	BDF2	Q07442	638 aa		4.54	□□□□□ -1.68
CSM4	YPL200W	WHI4	Q07655	649 aa	Known RBP	4.54	□□□□□ -1.68
CSM4	YPL200W	NTO1	Q12311	748 aa		4.54	□□□□□ -1.68
CSM4	YPL200W	MSD1	P15179	658 aa	Known RBP	4.53	□□□□□ -1.68
CSM4	YPL200W	REC104	P33323	182 aa		4.53	□□□□□ -1.68
CSM4	YPL200W	PET10	P36139	283 aa		4.53	□□□□□ -1.68
CSM4	YPL200W	URM1	P40554	99 aa	Predicted RBP	4.53	□□□□□ -1.68
CSM4	YPL200W	CCM1	P48237	864 aa	Predicted RBP	4.53	□□□□□ -1.68
CSM4	YPL200W	RAI1	P53063	387 aa	Known RBP	4.53	□□□□□ -1.68
CSM4	YPL200W	SUN4	P53616	420 aa		4.53	□□□□□ -1.68
CSM4	YPL200W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
CSM4	YPL200W	TAF8	Q03750	510 aa		4.53	□□□□□ -1.68
CSM4	YPL200W	NSE3	Q05541	303 aa		4.53	□□□□□ -1.68
CSM4	YPL200W	RPP2A	P05319	106 aa	Known RBP	4.52	□□□□□ -1.69
CSM4	YPL200W	PMI40	P29952	429 aa	Known RBP	4.52	□□□□□ -1.69
CSM4	YPL200W	STE13	P33894	931 aa		4.52	□□□□□ -1.69
CSM4	YPL200W	RSP5	P39940	809 aa	Known RBP	4.52	□□□□□ -1.69
CSM4	YPL200W	HUL4	P40985	892 aa		4.52	□□□□□ -1.69
CSM4	YPL200W	CDC53	Q12018	815 aa	Known RBP	4.52	□□□□□ -1.69
CSM4	YPL200W	YOL098C	Q12496	1037 aa		4.52	□□□□□ -1.69
CSM4	YPL200W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
CSM4	YPL200W	RPD3	P32561	433 aa		4.51	□□□□□ -1.69
CSM4	YPL200W	ATG19	P35193	415 aa		4.51	□□□□□ -1.69
CSM4	YPL200W	BET3	P36149	193 aa		4.51	□□□□□ -1.69
CSM4	YPL200W	OCA5	P38738	679 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms