RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W PHM7Q12252 991 aa6.37□□□□□ -1.39
VPS5YOR069W PDR1P12383 1068 aa6.36□□□□□ -1.39
VPS5YOR069W SIN4P32259 974 aa6.36□□□□□ -1.39
VPS5YOR069W SEG2P34250 1132 aa6.36□□□□□ -1.39
VPS5YOR069W YGL138CP53122 345 aa6.36□□□□□ -1.39
VPS5YOR069W EEB1Q02891 456 aa6.36□□□□□ -1.39
VPS5YOR069W SHE9Q04172 456 aa6.36□□□□□ -1.39
VPS5YOR069W UTP14Q04500 899 aaKnown RBP6.36□□□□□ -1.39
VPS5YOR069W YDR341CQ05506 607 aaKnown RBP6.36□□□□□ -1.39
VPS5YOR069W YSH1Q06224 779 aaPredicted RBP6.36□□□□□ -1.39
VPS5YOR069W VIP1Q06685 1146 aaKnown RBP6.36□□□□□ -1.39
VPS5YOR069W VMA4P22203 233 aaKnown RBP6.35□□□□□ -1.39
VPS5YOR069W MAK31P23059 88 aa6.35□□□□□ -1.39
VPS5YOR069W CBF2P32504 956 aa6.35□□□□□ -1.39
VPS5YOR069W KAR9P32526 644 aa6.35□□□□□ -1.39
VPS5YOR069W NIP100P33420 868 aa6.35□□□□□ -1.39
VPS5YOR069W STT3P39007 718 aaKnown RBP6.35□□□□□ -1.39
VPS5YOR069W ALG2P43636 503 aa6.35□□□□□ -1.39
VPS5YOR069W MCM6P53091 1017 aaKnown RBP6.35□□□□□ -1.39
VPS5YOR069W YNL040WP53960 456 aaPredicted RBP6.35□□□□□ -1.39
VPS5YOR069W YPR078CQ06813 372 aa6.35□□□□□ -1.39
VPS5YOR069W YPR097WQ06839 1073 aa6.35□□□□□ -1.39
VPS5YOR069W AIM41Q12032 185 aa6.35□□□□□ -1.39
VPS5YOR069W STI1P15705 589 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
VPS5YOR069W MYO3P36006 1272 aa6.35□□□□□ -1.39
VPS5YOR069W PET10P36139 283 aa6.35□□□□□ -1.39
VPS5YOR069W SCS2P40075 244 aaKnown RBP6.35□□□□□ -1.39
VPS5YOR069W THI6P41835 540 aa6.35□□□□□ -1.39
VPS5YOR069W SPR3P41901 512 aa6.35□□□□□ -1.39
VPS5YOR069W SUM1P46676 1062 aa6.35□□□□□ -1.39
VPS5YOR069W SDA1P53313 767 aaKnown RBP6.35□□□□□ -1.39
VPS5YOR069W IOC2Q12072 812 aa6.35□□□□□ -1.39
VPS5YOR069W FOB1O13329 566 aa6.34□□□□□ -1.39
VPS5YOR069W ENO2P00925 437 aaKnown RBP6.34□□□□□ -1.39
VPS5YOR069W THR4P16120 514 aaKnown RBP6.34□□□□□ -1.39
VPS5YOR069W RAD16P31244 790 aa6.34□□□□□ -1.39
VPS5YOR069W PYC2P32327 1180 aaKnown RBP6.34□□□□□ -1.39
VPS5YOR069W RPC82P32349 654 aa6.34□□□□□ -1.39
VPS5YOR069W NPL4P33755 580 aa6.34□□□□□ -1.39
VPS5YOR069W YBL055CP34220 418 aaPredicted RBP6.34□□□□□ -1.39
VPS5YOR069W ECM2P38241 364 aaKnown RBP6.34□□□□□ -1.39
VPS5YOR069W RCK2P38623 610 aa6.34□□□□□ -1.39
VPS5YOR069W YIR042CP40586 236 aa6.34□□□□□ -1.39
VPS5YOR069W THI12P42883 340 aa6.34□□□□□ -1.39
VPS5YOR069W THI5P43534 340 aa6.34□□□□□ -1.39
VPS5YOR069W RSC8P43609 557 aaKnown RBP6.34□□□□□ -1.39
VPS5YOR069W APL6P46682 809 aa6.34□□□□□ -1.39
VPS5YOR069W THI11P47183 340 aa6.34□□□□□ -1.39
VPS5YOR069W YGR153WP48238 217 aa6.34□□□□□ -1.39
VPS5YOR069W YGR021WP53212 290 aa6.34□□□□□ -1.39
VPS5YOR069W ASI1P54074 624 aa6.34□□□□□ -1.39
VPS5YOR069W INM2Q05533 292 aa6.34□□□□□ -1.39
VPS5YOR069W THI13Q07748 340 aa6.34□□□□□ -1.39
VPS5YOR069W MPC54Q08550 464 aa6.34□□□□□ -1.39
VPS5YOR069W SPO21Q12411 609 aa6.34□□□□□ -1.39
VPS5YOR069W ARG82P07250 355 aa6.33□□□□□ -1.4
VPS5YOR069W NAT1P12945 854 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W MIP1P15801 1254 aa6.33□□□□□ -1.4
VPS5YOR069W MLS1P30952 554 aa6.33□□□□□ -1.4
VPS5YOR069W CDC3P32457 520 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W EFB1P32471 206 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W SER1P33330 395 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W NUP60P39705 539 aa6.33□□□□□ -1.4
VPS5YOR069W GPD2P41911 440 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W TOS3P43637 560 aa6.33□□□□□ -1.4
VPS5YOR069W RIM8P53179 542 aa6.33□□□□□ -1.4
VPS5YOR069W UTP6Q02354 440 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W GTB1Q04924 702 aa6.33□□□□□ -1.4
VPS5YOR069W MET7Q08645 548 aa6.33□□□□□ -1.4
VPS5YOR069W CLF1Q12309 687 aaPredicted RBP6.33□□□□□ -1.4
VPS5YOR069W CLN3P13365 580 aa6.33□□□□□ -1.4
VPS5YOR069W SNA3P14359 133 aa6.33□□□□□ -1.4
VPS5YOR069W PLC1P32383 869 aa6.33□□□□□ -1.4
VPS5YOR069W GEF1P37020 779 aa6.33□□□□□ -1.4
VPS5YOR069W ERP5P38819 212 aa6.33□□□□□ -1.4
VPS5YOR069W SPL2P38839 148 aa6.33□□□□□ -1.4
VPS5YOR069W SIP5P40210 489 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W EMW1P42842 904 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W COS6P53344 381 aa6.33□□□□□ -1.4
VPS5YOR069W LGE1Q02796 332 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W TSR1Q07381 788 aaKnown RBP6.33□□□□□ -1.4
VPS5YOR069W CIT1P00890 479 aa6.32□□□□□ -1.4
VPS5YOR069W RPL24AP04449 155 aaKnown RBP6.32□□□□□ -1.4
VPS5YOR069W RIT1P23796 513 aa6.32□□□□□ -1.4
VPS5YOR069W NGR1P32831 672 aaKnown RBP6.32□□□□□ -1.4
VPS5YOR069W VPS35P34110 944 aa6.32□□□□□ -1.4
VPS5YOR069W SHE10P53075 577 aa6.32□□□□□ -1.4
VPS5YOR069W JJJ1P53863 590 aa6.32□□□□□ -1.4
VPS5YOR069W SFB2P53953 876 aa6.32□□□□□ -1.4
VPS5YOR069W MDM1Q01846 1127 aa6.32□□□□□ -1.4
VPS5YOR069W KRE28Q04431 385 aa6.32□□□□□ -1.4
VPS5YOR069W TDA9Q04545 1251 aa6.32□□□□□ -1.4
VPS5YOR069W ADY4Q05955 493 aa6.32□□□□□ -1.4
VPS5YOR069W CYB2P00175 591 aa6.32□□□□□ -1.4
VPS5YOR069W PRT1P06103 763 aaKnown RBP6.32□□□□□ -1.4
VPS5YOR069W CDC48P25694 835 aaKnown RBP6.32□□□□□ -1.4
VPS5YOR069W GCD6P32501 712 aaKnown RBP6.32□□□□□ -1.4
VPS5YOR069W NPL6P32832 435 aa6.32□□□□□ -1.4
VPS5YOR069W YKL133CP36066 463 aa6.32□□□□□ -1.4
VPS5YOR069W RPC37P36121 282 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms