RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W MDL2P33311 773 aa5.85□□□□□ -1.47
RCL1YOL010W PTK1P36002 662 aaPredicted RBP5.85□□□□□ -1.47
RCL1YOL010W UBX7P38349 436 aa5.85□□□□□ -1.47
RCL1YOL010W NOP2P40991 618 aaKnown RBP5.85□□□□□ -1.47
RCL1YOL010W SKP2P42843 763 aa5.85□□□□□ -1.47
RCL1YOL010W TAF1P46677 1066 aa5.85□□□□□ -1.47
RCL1YOL010W HGH1P48362 394 aaKnown RBP5.85□□□□□ -1.47
RCL1YOL010W SNU71P53207 620 aaKnown RBP5.85□□□□□ -1.47
RCL1YOL010W ECM29P38737 1868 aa5.85□□□□□ -1.47
RCL1YOL010W MRP7P12687 371 aa5.84□□□□□ -1.47
RCL1YOL010W KRS1P15180 591 aaKnown RBP5.84□□□□□ -1.47
RCL1YOL010W GPB2P39717 880 aa5.84□□□□□ -1.47
RCL1YOL010W YIR042CP40586 236 aa5.84□□□□□ -1.47
RCL1YOL010W OYE3P41816 400 aaPredicted RBP5.84□□□□□ -1.47
RCL1YOL010W BUL2Q03758 920 aaKnown RBP5.84□□□□□ -1.47
RCL1YOL010W YDL124WQ07551 312 aaKnown RBP5.84□□□□□ -1.47
RCL1YOL010W PRD1P25375 712 aa5.83□□□□□ -1.48
RCL1YOL010W AIM46P38885 310 aa5.83□□□□□ -1.48
RCL1YOL010W MSH4P40965 878 aaPredicted RBP5.83□□□□□ -1.48
RCL1YOL010W MMM1P41800 426 aa5.83□□□□□ -1.48
RCL1YOL010W GYP7P48365 746 aa5.83□□□□□ -1.48
RCL1YOL010W ART5P53244 586 aaKnown RBP5.83□□□□□ -1.48
RCL1YOL010W YAF9P53930 226 aa5.83□□□□□ -1.48
RCL1YOL010W RMD1Q03441 430 aa5.83□□□□□ -1.48
RCL1YOL010W YML037CQ03703 340 aa5.83□□□□□ -1.48
RCL1YOL010W CAD1P24813 409 aaKnown RBP5.82□□□□□ -1.48
RCL1YOL010W SRP40P32583 406 aaPredicted RBP5.82□□□□□ -1.48
RCL1YOL010W GIP4P39732 760 aa5.82□□□□□ -1.48
RCL1YOL010W LAP2Q10740 671 aa5.82□□□□□ -1.48
RCL1YOL010W NSI1Q12457 570 aa5.82□□□□□ -1.48
RCL1YOL010W POT1P27796 417 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
RCL1YOL010W HSP78P33416 811 aa5.81□□□□□ -1.48
RCL1YOL010W TOM71P38825 639 aaKnown RBP5.81□□□□□ -1.48
RCL1YOL010W TIF4631P39935 952 aaKnown RBP5.81□□□□□ -1.48
RCL1YOL010W YJR124CP47159 448 aa5.81□□□□□ -1.48
RCL1YOL010W YNR065CP53751 1116 aa5.81□□□□□ -1.48
RCL1YOL010W INM2Q05533 292 aa5.81□□□□□ -1.48
RCL1YOL010W CDA2Q06703 312 aa5.81□□□□□ -1.48
RCL1YOL010W CAN1P04817 590 aa5.8□□□□□ -1.48
RCL1YOL010W KTR4P38131 464 aa5.8□□□□□ -1.48
RCL1YOL010W CST26P38226 397 aa5.8□□□□□ -1.48
RCL1YOL010W CIT3P43635 486 aa5.8□□□□□ -1.48
RCL1YOL010W DAK1P54838 584 aaKnown RBP5.8□□□□□ -1.48
RCL1YOL010W HAS1Q03532 505 aaKnown RBP5.8□□□□□ -1.48
RCL1YOL010W GLO3P38682 493 aaKnown RBP5.79□□□□□ -1.48
RCL1YOL010W FUN12P39730 1002 aaKnown RBP5.79□□□□□ -1.48
RCL1YOL010W HXT8P40886 569 aa5.79□□□□□ -1.48
RCL1YOL010W VPS72Q03388 795 aa5.79□□□□□ -1.48
RCL1YOL010W MSC6Q08818 692 aaKnown RBP5.79□□□□□ -1.48
RCL1YOL010W RTP1Q12751 981 aa5.79□□□□□ -1.48
RCL1YOL010W PHR1P05066 565 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
RCL1YOL010W TSA1P34760 196 aaKnown RBP5.78□□□□□ -1.48
RCL1YOL010W UBP12P39538 1254 aa5.78□□□□□ -1.48
RCL1YOL010W PIP2P52960 996 aa5.78□□□□□ -1.48
RCL1YOL010W YGR122WP53272 402 aa5.78□□□□□ -1.48
RCL1YOL010W YGR125WP53273 1036 aa5.78□□□□□ -1.48
RCL1YOL010W FAR11P53917 953 aa5.78□□□□□ -1.48
RCL1YOL010W SRT1Q03175 343 aa5.78□□□□□ -1.48
RCL1YOL010W IOC4Q04213 475 aa5.78□□□□□ -1.48
RCL1YOL010W RPP0P05317 312 aaKnown RBP5.77□□□□□ -1.49
RCL1YOL010W POX1P13711 748 aa5.77□□□□□ -1.49
RCL1YOL010W SWC3P31376 625 aa5.77□□□□□ -1.49
RCL1YOL010W UTR4P32626 227 aa5.77□□□□□ -1.49
RCL1YOL010W YKR018CP36114 725 aa5.77□□□□□ -1.49
RCL1YOL010W GPT2P36148 743 aa5.77□□□□□ -1.49
RCL1YOL010W FMP10P40098 244 aa5.77□□□□□ -1.49
RCL1YOL010W RGD2P43556 714 aa5.77□□□□□ -1.49
RCL1YOL010W SGM1P47166 707 aa5.77□□□□□ -1.49
RCL1YOL010W EMI2Q04409 500 aaKnown RBP5.77□□□□□ -1.49
RCL1YOL010W RTT109Q07794 436 aa5.77□□□□□ -1.49
RCL1YOL010W YOR223WQ12015 292 aa5.77□□□□□ -1.49
RCL1YOL010W YUR1P26725 428 aa5.76□□□□□ -1.49
RCL1YOL010W URK1P27515 501 aa5.76□□□□□ -1.49
RCL1YOL010W VPS53P47061 822 aa5.76□□□□□ -1.49
RCL1YOL010W SCS3P53012 380 aa5.76□□□□□ -1.49
RCL1YOL010W THI22Q06490 572 aa5.76□□□□□ -1.49
RCL1YOL010W PUN1Q06991 263 aa5.76□□□□□ -1.49
RCL1YOL010W KEL3Q08979 651 aaPredicted RBP5.76□□□□□ -1.49
RCL1YOL010W RRI2Q12348 645 aa5.76□□□□□ -1.49
RCL1YOL010W SEN1Q00416 2231 aaKnown RBP5.76□□□□□ -1.49
RCL1YOL010W RPL40AP0CH08 128 aaKnown RBP5.75□□□□□ -1.49
RCL1YOL010W RPL40BP0CH09 128 aaKnown RBP5.75□□□□□ -1.49
RCL1YOL010W TTI1P36097 1038 aa5.75□□□□□ -1.49
RCL1YOL010W POA1P38218 177 aa5.75□□□□□ -1.49
RCL1YOL010W YNL034WP53963 612 aa5.75□□□□□ -1.49
RCL1YOL010W YNL018CP53976 612 aa5.75□□□□□ -1.49
RCL1YOL010W SLD5Q03406 294 aa5.75□□□□□ -1.49
RCL1YOL010W THI80P35202 319 aa5.74□□□□□ -1.49
RCL1YOL010W YGL039WP53183 348 aaKnown RBP5.74□□□□□ -1.49
RCL1YOL010W ALD6P54115 500 aaKnown RBP5.74□□□□□ -1.49
RCL1YOL010W GIS1Q03833 894 aa5.74□□□□□ -1.49
RCL1YOL010W SWI6P09959 803 aa5.73□□□□□ -1.49
RCL1YOL010W SEC18P18759 758 aaKnown RBP5.73□□□□□ -1.49
RCL1YOL010W PPZ1P26570 692 aa5.73□□□□□ -1.49
RCL1YOL010W SYN8P31377 255 aa5.73□□□□□ -1.49
RCL1YOL010W HUL4P40985 892 aa5.73□□□□□ -1.49
RCL1YOL010W GLO4Q12320 285 aa5.73□□□□□ -1.49
RCL1YOL010W LAM4P38800 1345 aa5.73□□□□□ -1.49
RCL1YOL010W PRE8P23639 250 aa5.72□□□□□ -1.49
RCL1YOL010W TIM23P32897 222 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms