RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	GAS5	Q08193	484 aa		5.76	□□□□□ -1.49
RPA49	YNL248C	THI72	Q08579	599 aa		5.76	□□□□□ -1.49
RPA49	YNL248C	RRP6	Q12149	733 aa	Known RBP	5.76	□□□□□ -1.49
RPA49	YNL248C	FAS2	P19097	1887 aa	Known RBP	5.75	□□□□□ -1.49
RPA49	YNL248C	FIG2	P25653	1609 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	QCR6	P00127	147 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	RPP2B	P02400	110 aa	Known RBP	5.75	□□□□□ -1.49
RPA49	YNL248C	NUC1	P08466	329 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	PET111	P08468	800 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	SRM1	P21827	482 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	PWP2	P25635	923 aa	Known RBP	5.75	□□□□□ -1.49
RPA49	YNL248C	SEC20	P28791	383 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	AFG2	P32794	780 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	BCD1	P38772	366 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	PES4	P39684	611 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	DAK2	P43550	591 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	EMP47	P43555	445 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	YLH47	Q06493	454 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	PCL8	Q08966	492 aa		5.75	□□□□□ -1.49
RPA49	YNL248C	AI1	P03875	834 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	TOP1	P04786	769 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	RPS6A	P0CX37	236 aa	Known RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	RPS6B	P0CX38	236 aa	Predicted RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	OM45	P16547	393 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	RPL8A	P17076	256 aa	Known RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	UBC1	P21734	215 aa	Known RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	GSY1	P23337	708 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	CHS3	P29465	1165 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	STO1	P34160	861 aa	Known RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	ERT1	P38140	529 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	YBL028C	P38202	106 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	REI1	P38344	393 aa	Predicted RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	EFM2	P38347	419 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	VTC2	P43585	828 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	ASE1	P50275	885 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	CAF130	P53280	1122 aa	Predicted RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	LSB1	P53281	241 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	RET3	P53600	189 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	ALF1	P53904	254 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	RBA50	Q04418	439 aa		5.74	□□□□□ -1.49
RPA49	YNL248C	VIP1	Q06685	1146 aa	Known RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	YDL124W	Q07551	312 aa	Known RBP	5.74	□□□□□ -1.49
RPA49	YNL248C	CTT1	P06115	562 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	MTF2	P10849	440 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	SRP54	P20424	541 aa	Known RBP	5.73	□□□□□ -1.49
RPA49	YNL248C	PKC1	P24583	1151 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	YKL091C	P33324	310 aa	Known RBP	5.73	□□□□□ -1.49
RPA49	YNL248C	RPC25	P35718	212 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	PET10	P36139	283 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	MIP6	P38760	659 aa	Known RBP	5.73	□□□□□ -1.49
RPA49	YNL248C	CEM1	P39525	442 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	SEC9	P40357	651 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	EAF6	P47128	113 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	UTP5	Q04177	643 aa	Known RBP	5.73	□□□□□ -1.49
RPA49	YNL248C	YPL216W	Q08964	1102 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	GIN4	Q12263	1142 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	SMC6	Q12749	1114 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	FLO1	P32768	1537 aa		5.73	□□□□□ -1.49
RPA49	YNL248C	FOB1	O13329	566 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	SPO11	P23179	398 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	YDJ1	P25491	409 aa	Known RBP	5.72	□□□□□ -1.49
RPA49	YNL248C	BIO2	P32451	375 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	ISF1	P32488	338 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	CST26	P38226	397 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	ERG7	P38604	731 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	DLD3	P39976	496 aa	Known RBP	5.72	□□□□□ -1.49
RPA49	YNL248C	YER156C	P40093	338 aa	Known RBP	5.72	□□□□□ -1.49
RPA49	YNL248C	ATG3	P40344	310 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	ATG32	P40458	529 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	CIT3	P43635	486 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	YGR153W	P48238	217 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	CBK1	P53894	756 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	RRB1	Q04225	511 aa	Known RBP	5.72	□□□□□ -1.49
RPA49	YNL248C	CRF1	Q04930	467 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	SML1	Q04964	104 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	ADY4	Q05955	493 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	OPY2	Q06810	360 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	SPO75	Q07798	868 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	YAP7	Q08182	245 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	YOL075C	Q08234	1294 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	HMI1	Q12039	706 aa		5.72	□□□□□ -1.49
RPA49	YNL248C	NOP14	Q99207	810 aa	Known RBP	5.72	□□□□□ -1.49
RPA49	YNL248C	SAM2	P19358	384 aa	Known RBP	5.71	□□□□□ -1.5
RPA49	YNL248C	ADP1	P25371	1049 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	RPC53	P25441	422 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	DPB3	P27344	201 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	SRB4	P32569	687 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	SHM1	P37292	490 aa	Predicted RBP	5.71	□□□□□ -1.5
RPA49	YNL248C	SMC2	P38989	1170 aa	Known RBP	5.71	□□□□□ -1.5
RPA49	YNL248C	THI6	P41835	540 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	AIP1	P46680	615 aa	Known RBP	5.71	□□□□□ -1.5
RPA49	YNL248C	CCT8	P47079	568 aa	Known RBP	5.71	□□□□□ -1.5
RPA49	YNL248C	ERG5	P54781	538 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	UME1	Q03010	460 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	ISR1	Q06098	443 aa	Known RBP	5.71	□□□□□ -1.5
RPA49	YNL248C	OXR1	Q08952	273 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	PLP2	Q12017	286 aa		5.71	□□□□□ -1.5
RPA49	YNL248C	PMA1	P05030	918 aa	Known RBP	5.7	□□□□□ -1.5
RPA49	YNL248C	SEC23	P15303	768 aa	Known RBP	5.7	□□□□□ -1.5
RPA49	YNL248C	SPO12	P17123	173 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms