RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A BAP2P38084 609 aa5.06□□□□□ -1.6
YSF3YNL138W-A RSC58Q07979 502 aa5.06□□□□□ -1.6
YSF3YNL138W-A ENT1Q12518 454 aa5.06□□□□□ -1.6
YSF3YNL138W-A STE5P32917 917 aa5.05□□□□□ -1.6
YSF3YNL138W-A PIN4P34217 668 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
YSF3YNL138W-A PNT1P38969 423 aa5.05□□□□□ -1.6
YSF3YNL138W-A CCZ1P38273 704 aa5.04□□□□□ -1.6
YSF3YNL138W-A TAT2P38967 592 aa5.04□□□□□ -1.6
YSF3YNL138W-A KRI1P42846 591 aaKnown RBP5.04□□□□□ -1.6
YSF3YNL138W-A IMH1Q06704 911 aaKnown RBP5.04□□□□□ -1.6
YSF3YNL138W-A LPX1Q12405 387 aaKnown RBP5.04□□□□□ -1.6
YSF3YNL138W-A GEA1P47102 1408 aaPredicted RBP5.04□□□□□ -1.6
YSF3YNL138W-A GCN2P15442 1659 aa5.03□□□□□ -1.6
YSF3YNL138W-A HSP78P33416 811 aa5.03□□□□□ -1.6
YSF3YNL138W-A YBR184WP38299 523 aa5.03□□□□□ -1.6
YSF3YNL138W-A PIK1P39104 1066 aa5.03□□□□□ -1.6
YSF3YNL138W-A NRD1P53617 575 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
YSF3YNL138W-A SHE9Q04172 456 aa5.03□□□□□ -1.6
YSF3YNL138W-A RSB1Q08417 382 aa5.03□□□□□ -1.6
YSF3YNL138W-A UGA2P38067 497 aa5.02□□□□□ -1.61
YSF3YNL138W-A NNF1P47149 201 aa5.02□□□□□ -1.61
YSF3YNL138W-A NAN1Q02931 896 aaKnown RBP5.02□□□□□ -1.61
YSF3YNL138W-A NBA1Q08229 501 aaKnown RBP5.02□□□□□ -1.61
YSF3YNL138W-A ACM1Q08981 209 aa5.02□□□□□ -1.61
YSF3YNL138W-A RRP5Q05022 1729 aaKnown RBP5.01□□□□□ -1.61
YSF3YNL138W-A RAD4P14736 754 aa5.01□□□□□ -1.61
YSF3YNL138W-A SLA2P33338 968 aa5.01□□□□□ -1.61
YSF3YNL138W-A MRP8P35719 219 aa5.01□□□□□ -1.61
YSF3YNL138W-A SNF7P39929 240 aaKnown RBP5.01□□□□□ -1.61
YSF3YNL138W-A BI4P03879 638 aa5□□□□□ -1.61
YSF3YNL138W-A SPS1P08458 490 aa5□□□□□ -1.61
YSF3YNL138W-A LRG1P35688 1017 aa5□□□□□ -1.61
YSF3YNL138W-A GEM1P39722 662 aa5□□□□□ -1.61
YSF3YNL138W-A YKL151CP36059 337 aa4.99□□□□□ -1.61
YSF3YNL138W-A ABZ1P37254 787 aaPredicted RBP4.99□□□□□ -1.61
YSF3YNL138W-A POL12P38121 705 aaPredicted RBP4.99□□□□□ -1.61
YSF3YNL138W-A PBY1P38254 753 aa4.99□□□□□ -1.61
YSF3YNL138W-A IRR1P40541 1150 aa4.99□□□□□ -1.61
YSF3YNL138W-A MAP1Q01662 387 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
YSF3YNL138W-A HRQ1Q05549 1077 aa4.99□□□□□ -1.61
YSF3YNL138W-A OCA5P38738 679 aa4.98□□□□□ -1.61
YSF3YNL138W-A ETP1P38748 585 aaKnown RBP4.98□□□□□ -1.61
YSF3YNL138W-A IOC3P43596 787 aa4.98□□□□□ -1.61
YSF3YNL138W-A TIM54P47045 478 aa4.98□□□□□ -1.61
YSF3YNL138W-A FOL2P51601 243 aaKnown RBP4.98□□□□□ -1.61
YSF3YNL138W-A ORC3P54790 616 aa4.98□□□□□ -1.61
YSF3YNL138W-A FMP25Q08023 583 aa4.98□□□□□ -1.61
YSF3YNL138W-A SVS1Q12254 260 aa4.98□□□□□ -1.61
YSF3YNL138W-A KRE5P22023 1365 aa4.97□□□□□ -1.61
YSF3YNL138W-A CFT1Q06632 1357 aaKnown RBP4.97□□□□□ -1.61
YSF3YNL138W-A RPL8BP29453 256 aaKnown RBP4.97□□□□□ -1.61
YSF3YNL138W-A SEC26P41810 973 aaKnown RBP4.97□□□□□ -1.61
YSF3YNL138W-A PFD1P46988 109 aa4.97□□□□□ -1.61
YSF3YNL138W-A YJL049WP47048 450 aa4.97□□□□□ -1.61
YSF3YNL138W-A HUL5P53119 910 aa4.97□□□□□ -1.61
YSF3YNL138W-A DUS3Q06053 668 aaKnown RBP4.97□□□□□ -1.61
YSF3YNL138W-A YDR306CQ06640 478 aa4.97□□□□□ -1.61
YSF3YNL138W-A YOL098CQ12496 1037 aa4.97□□□□□ -1.61
YSF3YNL138W-A DFG16Q99234 619 aa4.97□□□□□ -1.61
YSF3YNL138W-A ACE2P21192 770 aa4.96□□□□□ -1.62
YSF3YNL138W-A SAH1P39954 449 aaKnown RBP4.96□□□□□ -1.62
YSF3YNL138W-A GUS1P46655 708 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
YSF3YNL138W-A MTC3P53077 123 aa4.96□□□□□ -1.62
YSF3YNL138W-A UBX5Q06682 500 aa4.96□□□□□ -1.62
YSF3YNL138W-A SPO75Q07798 868 aa4.96□□□□□ -1.62
YSF3YNL138W-A YDL177CQ12257 170 aa4.96□□□□□ -1.62
YSF3YNL138W-A TOM1Q03280 3268 aa4.95□□□□□ -1.62
YSF3YNL138W-A RFC5P38251 354 aa4.95□□□□□ -1.62
YSF3YNL138W-A ALR2P43553 858 aa4.95□□□□□ -1.62
YSF3YNL138W-A HFM1P51979 1187 aa4.95□□□□□ -1.62
YSF3YNL138W-A NSE3Q05541 303 aa4.95□□□□□ -1.62
YSF3YNL138W-A EAF1Q06337 982 aa4.95□□□□□ -1.62
YSF3YNL138W-A ATG13Q06628 738 aa4.95□□□□□ -1.62
YSF3YNL138W-A BDF2Q07442 638 aa4.95□□□□□ -1.62
YSF3YNL138W-A URB1P34241 1764 aaKnown RBP4.95□□□□□ -1.62
YSF3YNL138W-A THS1P04801 734 aaKnown RBP4.94□□□□□ -1.62
YSF3YNL138W-A ARE1P25628 610 aa4.94□□□□□ -1.62
YSF3YNL138W-A APL1P27351 700 aa4.94□□□□□ -1.62
YSF3YNL138W-A PPH3P32345 308 aa4.94□□□□□ -1.62
YSF3YNL138W-A CDC12P32468 407 aaKnown RBP4.94□□□□□ -1.62
YSF3YNL138W-A SEG2P34250 1132 aa4.94□□□□□ -1.62
YSF3YNL138W-A RPN11P43588 306 aaKnown RBP4.94□□□□□ -1.62
YSF3YNL138W-A MDM38Q08179 573 aa4.94□□□□□ -1.62
YSF3YNL138W-A CDC53Q12018 815 aaKnown RBP4.94□□□□□ -1.62
YSF3YNL138W-A RIB2Q12362 591 aaKnown RBP4.94□□□□□ -1.62
YSF3YNL138W-A PRP9P19736 530 aaKnown RBP4.93□□□□□ -1.62
YSF3YNL138W-A AAR2P32357 355 aaPredicted RBP4.93□□□□□ -1.62
YSF3YNL138W-A SRP40P32583 406 aaPredicted RBP4.93□□□□□ -1.62
YSF3YNL138W-A HBS1P32769 611 aaKnown RBP4.93□□□□□ -1.62
YSF3YNL138W-A YHR020WP38708 688 aaKnown RBP4.93□□□□□ -1.62
YSF3YNL138W-A RRT14P40470 206 aa4.93□□□□□ -1.62
YSF3YNL138W-A ERP6P53198 216 aa4.93□□□□□ -1.62
YSF3YNL138W-A YGR125WP53273 1036 aa4.93□□□□□ -1.62
YSF3YNL138W-A UTP8P53276 713 aaKnown RBP4.93□□□□□ -1.62
YSF3YNL138W-A YNR029CP53729 429 aaKnown RBP4.93□□□□□ -1.62
YSF3YNL138W-A RIA1P53893 1110 aa4.93□□□□□ -1.62
YSF3YNL138W-A SRP1Q02821 542 aaKnown RBP4.93□□□□□ -1.62
YSF3YNL138W-A RSM24Q03976 319 aa4.93□□□□□ -1.62
YSF3YNL138W-A XYL2Q07993 356 aa4.93□□□□□ -1.62
YSF3YNL138W-A FLC1Q08967 793 aa4.93□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms