RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W ENV11P53246 860 aa6.79□□□□□ -1.32
CTR3YLR411W DNF1P32660 1571 aa6.78□□□□□ -1.32
CTR3YLR411W RAD4P14736 754 aa6.78□□□□□ -1.32
CTR3YLR411W ACE2P21192 770 aa6.78□□□□□ -1.32
CTR3YLR411W RFC5P38251 354 aa6.78□□□□□ -1.32
CTR3YLR411W OCA5P38738 679 aa6.78□□□□□ -1.32
CTR3YLR411W ETP1P38748 585 aaKnown RBP6.78□□□□□ -1.32
CTR3YLR411W RRT14P40470 206 aa6.78□□□□□ -1.32
CTR3YLR411W GUS1P46655 708 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
CTR3YLR411W PFD1P46988 109 aa6.78□□□□□ -1.32
CTR3YLR411W MTC3P53077 123 aa6.78□□□□□ -1.32
CTR3YLR411W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
CTR3YLR411W HRQ1Q05549 1077 aa6.78□□□□□ -1.32
CTR3YLR411W FMP25Q08023 583 aa6.78□□□□□ -1.32
CTR3YLR411W YDL177CQ12257 170 aa6.78□□□□□ -1.32
CTR3YLR411W YBT1P32386 1661 aa6.77□□□□□ -1.32
CTR3YLR411W SPT7P35177 1332 aa6.77□□□□□ -1.32
CTR3YLR411W IQG1Q12280 1495 aa6.77□□□□□ -1.33
CTR3YLR411W RPL8BP29453 256 aaKnown RBP6.76□□□□□ -1.33
CTR3YLR411W CDC12P32468 407 aaKnown RBP6.76□□□□□ -1.33
CTR3YLR411W DUS3Q06053 668 aaKnown RBP6.76□□□□□ -1.33
CTR3YLR411W SPO75Q07798 868 aa6.76□□□□□ -1.33
CTR3YLR411W YLL058WQ12198 575 aa6.76□□□□□ -1.33
CTR3YLR411W GCN2P15442 1659 aa6.76□□□□□ -1.33
CTR3YLR411W MHP1P43638 1398 aa6.75□□□□□ -1.33
CTR3YLR411W PRP9P19736 530 aaKnown RBP6.75□□□□□ -1.33
CTR3YLR411W SEG2P34250 1132 aa6.75□□□□□ -1.33
CTR3YLR411W YDR306CQ06640 478 aa6.75□□□□□ -1.33
CTR3YLR411W MDM38Q08179 573 aa6.75□□□□□ -1.33
CTR3YLR411W RIB2Q12362 591 aaKnown RBP6.75□□□□□ -1.33
CTR3YLR411W YOL098CQ12496 1037 aa6.75□□□□□ -1.33
CTR3YLR411W PDR12Q02785 1511 aa6.75□□□□□ -1.33
CTR3YLR411W SAH1P39954 449 aaKnown RBP6.74□□□□□ -1.33
CTR3YLR411W IOC3P43596 787 aa6.74□□□□□ -1.33
CTR3YLR411W HFM1P51979 1187 aa6.74□□□□□ -1.33
CTR3YLR411W UTP8P53276 713 aaKnown RBP6.74□□□□□ -1.33
CTR3YLR411W SRP1Q02821 542 aaKnown RBP6.74□□□□□ -1.33
CTR3YLR411W RSM24Q03976 319 aa6.74□□□□□ -1.33
CTR3YLR411W TY1B-JR2P47100 1755 aaKnown RBP6.74□□□□□ -1.33
CTR3YLR411W TY1B-ER2Q03619 1755 aa6.74□□□□□ -1.33
CTR3YLR411W TY1B-MR1Q04214 1755 aa6.74□□□□□ -1.33
CTR3YLR411W TY1B-MR2Q04670 1755 aaKnown RBP6.74□□□□□ -1.33
CTR3YLR411W TY1B-LR1Q12088 1755 aaKnown RBP6.74□□□□□ -1.33
CTR3YLR411W TY1B-NL1Q12112 1755 aa6.74□□□□□ -1.33
CTR3YLR411W TY1B-GR1Q12141 1755 aa6.74□□□□□ -1.33
CTR3YLR411W TY1B-BLQ12490 1755 aa6.74□□□□□ -1.33
CTR3YLR411W SCT1P32784 759 aa6.73□□□□□ -1.33
CTR3YLR411W TIM54P47045 478 aa6.73□□□□□ -1.33
CTR3YLR411W NSE3Q05541 303 aa6.73□□□□□ -1.33
CTR3YLR411W BDF2Q07442 638 aa6.73□□□□□ -1.33
CTR3YLR411W KIN2P13186 1147 aaKnown RBP6.72□□□□□ -1.33
CTR3YLR411W APL1P27351 700 aa6.72□□□□□ -1.33
CTR3YLR411W HBS1P32769 611 aaKnown RBP6.72□□□□□ -1.33
CTR3YLR411W PRS1P32895 427 aaKnown RBP6.72□□□□□ -1.33
CTR3YLR411W ALR2P43553 858 aa6.72□□□□□ -1.33
CTR3YLR411W HUL5P53119 910 aa6.72□□□□□ -1.33
CTR3YLR411W ERP6P53198 216 aa6.72□□□□□ -1.33
CTR3YLR411W MRPL22P53881 309 aa6.72□□□□□ -1.33
CTR3YLR411W SIZ1Q04195 904 aa6.72□□□□□ -1.33
CTR3YLR411W EAF1Q06337 982 aa6.72□□□□□ -1.33
CTR3YLR411W OSH2Q12451 1283 aa6.72□□□□□ -1.33
CTR3YLR411W ARO1P08566 1588 aaKnown RBP6.71□□□□□ -1.34
CTR3YLR411W YLR419WQ06698 1435 aaKnown RBP6.71□□□□□ -1.34
CTR3YLR411W CYC1P00044 109 aaPredicted RBP6.71□□□□□ -1.34
CTR3YLR411W AAR2P32357 355 aaPredicted RBP6.71□□□□□ -1.34
CTR3YLR411W TSA1P34760 196 aaKnown RBP6.71□□□□□ -1.34
CTR3YLR411W YHR020WP38708 688 aaKnown RBP6.71□□□□□ -1.34
CTR3YLR411W AVT1P47082 602 aa6.71□□□□□ -1.34
CTR3YLR411W SNO2P53823 222 aa6.71□□□□□ -1.34
CTR3YLR411W SRT1Q03175 343 aa6.71□□□□□ -1.34
CTR3YLR411W BUD21Q08492 214 aaPredicted RBP6.71□□□□□ -1.34
CTR3YLR411W STI1P15705 589 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
CTR3YLR411W SRM1P21827 482 aa6.7□□□□□ -1.34
CTR3YLR411W PPH3P32345 308 aa6.7□□□□□ -1.34
CTR3YLR411W PAF1P38351 445 aa6.7□□□□□ -1.34
CTR3YLR411W GIC1P38785 314 aa6.7□□□□□ -1.34
CTR3YLR411W TPO2P53283 614 aa6.7□□□□□ -1.34
CTR3YLR411W UBX5Q06682 500 aa6.7□□□□□ -1.34
CTR3YLR411W XYL2Q07993 356 aa6.7□□□□□ -1.34
CTR3YLR411W GDB1Q06625 1536 aa6.7□□□□□ -1.34
CTR3YLR411W NTE1Q04958 1679 aa6.69□□□□□ -1.34
CTR3YLR411W CMP2P14747 604 aa6.69□□□□□ -1.34
CTR3YLR411W HSP60P19882 572 aaKnown RBP6.69□□□□□ -1.34
CTR3YLR411W GAS1P22146 559 aaKnown RBP6.69□□□□□ -1.34
CTR3YLR411W ARE1P25628 610 aa6.69□□□□□ -1.34
CTR3YLR411W FUN30P31380 1131 aa6.69□□□□□ -1.34
CTR3YLR411W ELM1P32801 640 aa6.69□□□□□ -1.34
CTR3YLR411W SIT1P39980 628 aa6.69□□□□□ -1.34
CTR3YLR411W NPP2P39997 493 aa6.69□□□□□ -1.34
CTR3YLR411W YGR125WP53273 1036 aa6.69□□□□□ -1.34
CTR3YLR411W MSC2Q03455 724 aa6.69□□□□□ -1.34
CTR3YLR411W CDA2Q06703 312 aa6.69□□□□□ -1.34
CTR3YLR411W FLC1Q08967 793 aa6.69□□□□□ -1.34
CTR3YLR411W CDC53Q12018 815 aaKnown RBP6.69□□□□□ -1.34
CTR3YLR411W OSW2Q12202 724 aa6.69□□□□□ -1.34
CTR3YLR411W RPO21P04050 1733 aaKnown RBP6.68□□□□□ -1.34
CTR3YLR411W CIT1P00890 479 aa6.68□□□□□ -1.34
CTR3YLR411W GAL10P04397 699 aa6.68□□□□□ -1.34
CTR3YLR411W AFR1P33304 620 aa6.68□□□□□ -1.34
CTR3YLR411W YAP1801P38856 637 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 97.8 ms