RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C STB4P50104 949 aa4.1□□□□□ -1.75
RPL40BYKR094C TYW3P53177 273 aa4.1□□□□□ -1.75
RPL40BYKR094C YMR206WQ03695 313 aa4.1□□□□□ -1.75
RPL40BYKR094C MCH5Q08777 521 aa4.1□□□□□ -1.75
RPL40BYKR094C YLL058WQ12198 575 aa4.1□□□□□ -1.75
RPL40BYKR094C RKM4Q12504 494 aa4.1□□□□□ -1.75
RPL40BYKR094C FUN30P31380 1131 aa4.09□□□□□ -1.75
RPL40BYKR094C YKL107WP34251 309 aa4.09□□□□□ -1.75
RPL40BYKR094C QRI1P43123 477 aaKnown RBP4.09□□□□□ -1.75
RPL40BYKR094C LGE1Q02796 332 aaKnown RBP4.09□□□□□ -1.75
RPL40BYKR094C ERG4P25340 473 aa4.08□□□□□ -1.76
RPL40BYKR094C STU2P46675 888 aa4.08□□□□□ -1.76
RPL40BYKR094C YLR225CQ05948 407 aaKnown RBP4.08□□□□□ -1.76
RPL40BYKR094C RRP15Q06511 250 aaPredicted RBP4.08□□□□□ -1.76
RPL40BYKR094C OMS1Q06668 471 aa4.08□□□□□ -1.76
RPL40BYKR094C GUP2Q08929 609 aa4.08□□□□□ -1.76
RPL40BYKR094C KTR4P38131 464 aa4.07□□□□□ -1.76
RPL40BYKR094C SFB2P53953 876 aa4.07□□□□□ -1.76
RPL40BYKR094C BDF2Q07442 638 aa4.07□□□□□ -1.76
RPL40BYKR094C CDC34P14682 295 aa4.06□□□□□ -1.76
RPL40BYKR094C ATG19P35193 415 aa4.06□□□□□ -1.76
RPL40BYKR094C SAH1P39954 449 aaKnown RBP4.06□□□□□ -1.76
RPL40BYKR094C MUK1Q02866 612 aa4.06□□□□□ -1.76
RPL40BYKR094C ESC2Q06340 456 aa4.06□□□□□ -1.76
RPL40BYKR094C UPC2Q12151 913 aa4.06□□□□□ -1.76
RPL40BYKR094C TRM13Q12383 476 aa4.06□□□□□ -1.76
RPL40BYKR094C IRC10Q08118 586 aa4.05□□□□□ -1.76
RPL40BYKR094C TRP4P07285 380 aaPredicted RBP4.04□□□□□ -1.76
RPL40BYKR094C ACF2Q12168 779 aa4.04□□□□□ -1.76
RPL40BYKR094C STE14P32584 239 aa4.03□□□□□ -1.76
RPL40BYKR094C PET112P33893 541 aa4.03□□□□□ -1.76
RPL40BYKR094C CUE2P36075 443 aaKnown RBP4.03□□□□□ -1.76
RPL40BYKR094C GND2P53319 492 aa4.03□□□□□ -1.76
RPL40BYKR094C RNT1Q02555 471 aa4.03□□□□□ -1.76
RPL40BYKR094C SLU7Q02775 382 aaKnown RBP4.03□□□□□ -1.76
RPL40BYKR094C SED4P25365 1065 aa4.02□□□□□ -1.77
RPL40BYKR094C MTH1P35198 433 aa4.02□□□□□ -1.77
RPL40BYKR094C MET10P39692 1035 aa4.02□□□□□ -1.77
RPL40BYKR094C TIM44Q01852 431 aa4.02□□□□□ -1.77
RPL40BYKR094C RMD1Q03441 430 aa4.02□□□□□ -1.77
RPL40BYKR094C SPO20Q04359 397 aa4.02□□□□□ -1.77
RPL40BYKR094C ALG7P07286 448 aa4.01□□□□□ -1.77
RPL40BYKR094C CDC12P32468 407 aaKnown RBP4.01□□□□□ -1.77
RPL40BYKR094C SNM1P40993 198 aa4.01□□□□□ -1.77
RPL40BYKR094C YPR196WQ06595 470 aa4.01□□□□□ -1.77
RPL40BYKR094C PPR1P07272 904 aaPredicted RBP4□□□□□ -1.77
RPL40BYKR094C ABD1P32783 436 aaPredicted RBP4□□□□□ -1.77
RPL40BYKR094C SPC42P36094 363 aa4□□□□□ -1.77
RPL40BYKR094C RAI1P53063 387 aaKnown RBP4□□□□□ -1.77
RPL40BYKR094C ERG5P54781 538 aa4□□□□□ -1.77
RPL40BYKR094C PIN4P34217 668 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
RPL40BYKR094C MBP1P39678 833 aa3.99□□□□□ -1.77
RPL40BYKR094C OYE2Q03558 400 aaKnown RBP3.99□□□□□ -1.77
RPL40BYKR094C RPC82P32349 654 aa3.98□□□□□ -1.77
RPL40BYKR094C YER158CP40095 573 aa3.98□□□□□ -1.77
RPL40BYKR094C SRP1Q02821 542 aaKnown RBP3.98□□□□□ -1.77
RPL40BYKR094C DUS3Q06053 668 aaKnown RBP3.98□□□□□ -1.77
RPL40BYKR094C PEX2P32800 271 aa3.97□□□□□ -1.77
RPL40BYKR094C SNF7P39929 240 aaKnown RBP3.97□□□□□ -1.77
RPL40BYKR094C GYP7P48365 746 aa3.97□□□□□ -1.77
RPL40BYKR094C SEC21P32074 935 aaKnown RBP3.96□□□□□ -1.78
RPL40BYKR094C SDS3P40505 327 aa3.96□□□□□ -1.78
RPL40BYKR094C FAA4P47912 694 aaKnown RBP3.96□□□□□ -1.78
RPL40BYKR094C SSL1Q04673 461 aaPredicted RBP3.96□□□□□ -1.78
RPL40BYKR094C NOT3P06102 836 aaKnown RBP3.95□□□□□ -1.78
RPL40BYKR094C PPS1P38148 807 aa3.95□□□□□ -1.78
RPL40BYKR094C TSL1P38427 1098 aaKnown RBP3.95□□□□□ -1.78
RPL40BYKR094C YGR053CP53234 283 aa3.95□□□□□ -1.78
RPL40BYKR094C PEX19Q07418 342 aa3.95□□□□□ -1.78
RPL40BYKR094C MNR2P35724 969 aa3.94□□□□□ -1.78
RPL40BYKR094C HBT1Q07653 1046 aaKnown RBP3.94□□□□□ -1.78
RPL40BYKR094C FRE5Q08908 694 aa3.94□□□□□ -1.78
RPL40BYKR094C NPP1P25353 742 aa3.93□□□□□ -1.78
RPL40BYKR094C YKR078WP36158 585 aaKnown RBP3.93□□□□□ -1.78
RPL40BYKR094C MRH1Q12117 320 aaPredicted RBP3.93□□□□□ -1.78
RPL40BYKR094C SUT2Q12286 268 aa3.93□□□□□ -1.78
RPL40BYKR094C NDJ1Q12366 352 aa3.93□□□□□ -1.78
RPL40BYKR094C CDC48P25694 835 aaKnown RBP3.92□□□□□ -1.78
RPL40BYKR094C RPD3P32561 433 aa3.92□□□□□ -1.78
RPL40BYKR094C STE13P33894 931 aa3.92□□□□□ -1.78
RPL40BYKR094C GUS1P46655 708 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
RPL40BYKR094C YKE2P52553 114 aa3.92□□□□□ -1.78
RPL40BYKR094C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
RPL40BYKR094C BNR1P40450 1375 aa3.91□□□□□ -1.78
RPL40BYKR094C TUB3P09734 445 aaKnown RBP3.91□□□□□ -1.78
RPL40BYKR094C HEM3P28789 327 aa3.91□□□□□ -1.78
RPL40BYKR094C CTF13P35203 478 aa3.91□□□□□ -1.78
RPL40BYKR094C ELO3P40319 345 aa3.91□□□□□ -1.78
RPL40BYKR094C SDP1P40479 209 aa3.91□□□□□ -1.78
RPL40BYKR094C GDE1Q02979 1223 aa3.91□□□□□ -1.78
RPL40BYKR094C MET3P08536 511 aa3.9□□□□□ -1.79
RPL40BYKR094C FBP1P09201 348 aa3.9□□□□□ -1.79
RPL40BYKR094C SBA1P28707 216 aaKnown RBP3.9□□□□□ -1.79
RPL40BYKR094C AFR1P33304 620 aa3.9□□□□□ -1.79
RPL40BYKR094C YBR238CP38330 731 aaKnown RBP3.9□□□□□ -1.79
RPL40BYKR094C YHL017WP38745 532 aa3.9□□□□□ -1.79
RPL40BYKR094C YDR306CQ06640 478 aa3.9□□□□□ -1.79
RPL40BYKR094C FAL1Q12099 399 aaKnown RBP3.9□□□□□ -1.79
RPL40BYKR094C AGP1P25376 633 aa3.89□□□□□ -1.79
RPL40BYKR094C PPH3P32345 308 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms