RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W KRI1P42846 591 aaKnown RBP3.22□□□□□ -1.89
TRM2YKR056W GUS1P46655 708 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
TRM2YKR056W YJR096WP47137 282 aa3.22□□□□□ -1.89
TRM2YKR056W ECL1P48235 211 aa3.22□□□□□ -1.89
TRM2YKR056W PRP43P53131 767 aaKnown RBP3.22□□□□□ -1.89
TRM2YKR056W SPC105P53148 917 aa3.22□□□□□ -1.89
TRM2YKR056W DSE4P53753 1117 aa3.22□□□□□ -1.89
TRM2YKR056W UBX4P54730 416 aa3.22□□□□□ -1.89
TRM2YKR056W MPH2P0CD99 609 aa3.21□□□□□ -1.9
TRM2YKR056W SFL1P20134 766 aa3.21□□□□□ -1.9
TRM2YKR056W DAL3P32459 195 aa3.21□□□□□ -1.9
TRM2YKR056W MTC2P34246 357 aa3.21□□□□□ -1.9
TRM2YKR056W GIP4P39732 760 aa3.21□□□□□ -1.9
TRM2YKR056W SIT1P39980 628 aa3.21□□□□□ -1.9
TRM2YKR056W GIP2P40036 548 aa3.21□□□□□ -1.9
TRM2YKR056W TAF1P46677 1066 aa3.21□□□□□ -1.9
TRM2YKR056W SDH1Q00711 640 aa3.21□□□□□ -1.9
TRM2YKR056W HFD1Q04458 532 aa3.21□□□□□ -1.9
TRM2YKR056W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9 RIP-Chip
TRM2YKR056W YEF3P16521 1044 aaKnown RBP3.21□□□□□ -1.9
TRM2YKR056W MLS1P30952 554 aa3.21□□□□□ -1.9
TRM2YKR056W DOM34P33309 386 aa3.21□□□□□ -1.9
TRM2YKR056W EXO84P38261 753 aa3.21□□□□□ -1.9
TRM2YKR056W SAH1P39954 449 aaKnown RBP3.21□□□□□ -1.9
TRM2YKR056W POL5P39985 1022 aaKnown RBP3.21□□□□□ -1.9
TRM2YKR056W GPP2P40106 250 aaKnown RBP3.21□□□□□ -1.9
TRM2YKR056W SOK2P53438 785 aaPredicted RBP3.21□□□□□ -1.9
TRM2YKR056W GIR2Q03768 265 aaPredicted RBP3.21□□□□□ -1.9
TRM2YKR056W SOG2Q08817 791 aa3.21□□□□□ -1.9
TRM2YKR056W PHR1P05066 565 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
TRM2YKR056W RAD18P10862 487 aa3.2□□□□□ -1.9
TRM2YKR056W GAS1P22146 559 aaKnown RBP3.2□□□□□ -1.9
TRM2YKR056W NFU1P32860 256 aa3.2□□□□□ -1.9
TRM2YKR056W SPC29P33419 253 aa3.2□□□□□ -1.9
TRM2YKR056W YKL077WP36081 392 aa3.2□□□□□ -1.9
TRM2YKR056W MCM7P38132 845 aa3.2□□□□□ -1.9
TRM2YKR056W SHU2P38957 223 aa3.2□□□□□ -1.9
TRM2YKR056W OAF1P39720 1047 aaPredicted RBP3.2□□□□□ -1.9
TRM2YKR056W GYP8P43570 497 aa3.2□□□□□ -1.9
TRM2YKR056W ALG2P43636 503 aa3.2□□□□□ -1.9
TRM2YKR056W NIT2P47016 307 aa3.2□□□□□ -1.9
TRM2YKR056W VMS1Q04311 632 aaKnown RBP3.2□□□□□ -1.9
TRM2YKR056W YDR306CQ06640 478 aa3.2□□□□□ -1.9
TRM2YKR056W TRE2Q08693 809 aa3.2□□□□□ -1.9
TRM2YKR056W YKL151CP36059 337 aa3.19□□□□□ -1.9
TRM2YKR056W ALG3P38179 458 aa3.19□□□□□ -1.9
TRM2YKR056W PCM1P38628 557 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W PNT1P38969 423 aa3.19□□□□□ -1.9
TRM2YKR056W VPS27P40343 622 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W HOS4P40480 1083 aa3.19□□□□□ -1.9
TRM2YKR056W RSC8P43609 557 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W SPO71Q03868 1245 aa3.19□□□□□ -1.9
TRM2YKR056W DFG16Q99234 619 aa3.19□□□□□ -1.9
TRM2YKR056W NPP1P25353 742 aa3.19□□□□□ -1.9
TRM2YKR056W DPB3P27344 201 aa3.19□□□□□ -1.9
TRM2YKR056W PTP2P29461 750 aa3.19□□□□□ -1.9
TRM2YKR056W RPN12P32496 274 aa3.19□□□□□ -1.9
TRM2YKR056W YHL041WP38730 149 aa3.19□□□□□ -1.9
TRM2YKR056W CKB2P38930 258 aa3.19□□□□□ -1.9
TRM2YKR056W NOC2P39744 710 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W CAF16P43569 289 aa3.19□□□□□ -1.9
TRM2YKR056W DUG1P43616 481 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W UTP22P53254 1237 aaPredicted RBP3.19□□□□□ -1.9
TRM2YKR056W PBP1P53297 722 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W HAS1Q03532 505 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W YDR338CQ05497 695 aa3.19□□□□□ -1.9
TRM2YKR056W ENT2Q05785 613 aa3.19□□□□□ -1.9
TRM2YKR056W RRP6Q12149 733 aaKnown RBP3.19□□□□□ -1.9
TRM2YKR056W YER152CP10356 443 aa3.18□□□□□ -1.9
TRM2YKR056W MIH1P23748 554 aa3.18□□□□□ -1.9
TRM2YKR056W PRP19P32523 503 aaKnown RBP3.18□□□□□ -1.9
TRM2YKR056W YEL1P34225 687 aa3.18□□□□□ -1.9
TRM2YKR056W MCD4P36051 919 aa3.18□□□□□ -1.9
TRM2YKR056W TRZ1P36159 838 aaPredicted RBP3.18□□□□□ -1.9
TRM2YKR056W KTR4P38131 464 aa3.18□□□□□ -1.9
TRM2YKR056W YGR283CP53336 341 aaPredicted RBP3.18□□□□□ -1.9
TRM2YKR056W RKM2Q03942 479 aa3.18□□□□□ -1.9
TRM2YKR056W RSC2Q06488 889 aa3.18□□□□□ -1.9
TRM2YKR056W YIG1Q08956 461 aa3.18□□□□□ -1.9
TRM2YKR056W GNT1Q12096 491 aa3.18□□□□□ -1.9
TRM2YKR056W RPL11AP0C0W9 174 aaKnown RBP3.17□□□□□ -1.9
TRM2YKR056W GSY1P23337 708 aa3.17□□□□□ -1.9
TRM2YKR056W KCC4P25389 1037 aa3.17□□□□□ -1.9
TRM2YKR056W DBF20P32328 564 aa3.17□□□□□ -1.9
TRM2YKR056W HEM12P32347 362 aaPredicted RBP3.17□□□□□ -1.9
TRM2YKR056W AAR2P32357 355 aaPredicted RBP3.17□□□□□ -1.9
TRM2YKR056W NIC96P34077 839 aa3.17□□□□□ -1.9
TRM2YKR056W RGD1P38339 666 aa3.17□□□□□ -1.9
TRM2YKR056W MXR1P40029 184 aa3.17□□□□□ -1.9
TRM2YKR056W TOK1P40310 691 aa3.17□□□□□ -1.9
TRM2YKR056W RPT2P40327 437 aaKnown RBP3.17□□□□□ -1.9
TRM2YKR056W AIM14P53109 570 aa3.17□□□□□ -1.9
TRM2YKR056W YNR063WP53749 607 aa3.17□□□□□ -1.9
TRM2YKR056W ATG33Q06485 197 aa3.17□□□□□ -1.9
TRM2YKR056W RSC3Q06639 885 aa3.17□□□□□ -1.9
TRM2YKR056W YTM1Q12024 460 aaPredicted RBP3.17□□□□□ -1.9
TRM2YKR056W RPL11BQ3E757 174 aaPredicted RBP3.17□□□□□ -1.9
TRM2YKR056W YOL087CQ99247 1116 aa3.17□□□□□ -1.9
TRM2YKR056W MSS18P08593 268 aa3.17□□□□□ -1.9
TRM2YKR056W FET4P40988 552 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 84 ms