RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C ISA1Q07821 250 aaPredicted RBP8.35□□□□□ -1.07
SNP1YIL061C FAL1Q12099 399 aaKnown RBP8.35□□□□□ -1.07
SNP1YIL061C GIN4Q12263 1142 aa8.35□□□□□ -1.07
SNP1YIL061C TOM70P07213 617 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C SSA1P10591 642 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C YDJ1P25491 409 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C CLB5P30283 435 aa8.34□□□□□ -1.07
SNP1YIL061C KTR2P33550 425 aa8.34□□□□□ -1.07
SNP1YIL061C MCR1P36060 302 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C SDS3P40505 327 aa8.34□□□□□ -1.07
SNP1YIL061C FIG4P42837 879 aa8.34□□□□□ -1.07
SNP1YIL061C TAD1P53065 400 aa8.34□□□□□ -1.07
SNP1YIL061C ARK1P53974 638 aa8.34□□□□□ -1.07
SNP1YIL061C NGL3Q03210 505 aa8.34□□□□□ -1.07
SNP1YIL061C OPY2Q06810 360 aa8.34□□□□□ -1.07
SNP1YIL061C DAS2Q12084 232 aa8.34□□□□□ -1.07
SNP1YIL061C NOP14Q99207 810 aaKnown RBP8.34□□□□□ -1.07
SNP1YIL061C PHO8P11491 566 aa8.33□□□□□ -1.08
SNP1YIL061C TCP1P12612 559 aaKnown RBP8.33□□□□□ -1.08
SNP1YIL061C CKI1P20485 582 aa8.33□□□□□ -1.08
SNP1YIL061C SRB4P32569 687 aa8.33□□□□□ -1.08
SNP1YIL061C YEL1P34225 687 aa8.33□□□□□ -1.08
SNP1YIL061C MAP2P38174 421 aaKnown RBP8.33□□□□□ -1.08
SNP1YIL061C REI1P38344 393 aaPredicted RBP8.33□□□□□ -1.08
SNP1YIL061C CTR1P49573 406 aa8.33□□□□□ -1.08
SNP1YIL061C PRP31P49704 494 aaPredicted RBP8.33□□□□□ -1.08
SNP1YIL061C TOF1P53840 1238 aa8.33□□□□□ -1.08
SNP1YIL061C CWC15Q03772 175 aaKnown RBP8.33□□□□□ -1.08
SNP1YIL061C YPR078CQ06813 372 aa8.33□□□□□ -1.08
SNP1YIL061C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
SNP1YIL061C SHP1P34223 423 aa8.32□□□□□ -1.08
SNP1YIL061C YKR018CP36114 725 aa8.32□□□□□ -1.08
SNP1YIL061C VAB2P40003 282 aa8.32□□□□□ -1.08
SNP1YIL061C RPN3P40016 523 aaKnown RBP8.32□□□□□ -1.08
SNP1YIL061C LCB2P40970 561 aa8.32□□□□□ -1.08
SNP1YIL061C SMC3P47037 1230 aa8.32□□□□□ -1.08
SNP1YIL061C NCS2P53923 493 aaPredicted RBP8.32□□□□□ -1.08
SNP1YIL061C RBA50Q04418 439 aa8.32□□□□□ -1.08
SNP1YIL061C SOV1Q04748 898 aa8.32□□□□□ -1.08
SNP1YIL061C DUS3Q06053 668 aaKnown RBP8.32□□□□□ -1.08
SNP1YIL061C UTR4P32626 227 aa8.31□□□□□ -1.08
SNP1YIL061C YSC83P32792 385 aa8.31□□□□□ -1.08
SNP1YIL061C UBP13P38187 747 aa8.31□□□□□ -1.08
SNP1YIL061C SET5P38890 526 aaKnown RBP8.31□□□□□ -1.08
SNP1YIL061C ZPR1P53303 486 aaKnown RBP8.31□□□□□ -1.08
SNP1YIL061C PEX29Q03370 554 aa8.31□□□□□ -1.08
SNP1YIL061C GIR2Q03768 265 aaPredicted RBP8.31□□□□□ -1.08
SNP1YIL061C YLR297WQ05899 129 aa8.31□□□□□ -1.08
SNP1YIL061C PUS5Q06244 254 aa8.31□□□□□ -1.08
SNP1YIL061C CRD1Q07560 283 aa8.31□□□□□ -1.08
SNP1YIL061C RLP24Q07915 199 aaKnown RBP8.31□□□□□ -1.08
SNP1YIL061C MLH2Q07980 695 aa8.31□□□□□ -1.08
SNP1YIL061C SMC1P32908 1225 aa8.3□□□□□ -1.08
SNP1YIL061C XRS2P33301 854 aa8.3□□□□□ -1.08
SNP1YIL061C SMF1P38925 575 aa8.3□□□□□ -1.08
SNP1YIL061C PNT1P38969 423 aa8.3□□□□□ -1.08
SNP1YIL061C CIN4P39110 191 aa8.3□□□□□ -1.08
SNP1YIL061C GPB2P39717 880 aa8.3□□□□□ -1.08
SNP1YIL061C MMM1P41800 426 aa8.3□□□□□ -1.08
SNP1YIL061C COS5P47187 383 aa8.3□□□□□ -1.08
SNP1YIL061C RRT6P53117 311 aaPredicted RBP8.3□□□□□ -1.08
SNP1YIL061C YGL039WP53183 348 aaKnown RBP8.3□□□□□ -1.08
SNP1YIL061C POB3Q04636 552 aaKnown RBP8.3□□□□□ -1.08
SNP1YIL061C YLR001CQ07895 862 aa8.3□□□□□ -1.08
SNP1YIL061C SIL1Q08199 421 aa8.3□□□□□ -1.08
SNP1YIL061C RKM4Q12504 494 aa8.3□□□□□ -1.08
SNP1YIL061C RPO26P20435 155 aa8.29□□□□□ -1.08
SNP1YIL061C NIP100P33420 868 aa8.29□□□□□ -1.08
SNP1YIL061C BYE1P36106 594 aa8.29□□□□□ -1.08
SNP1YIL061C CCT4P39078 528 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C HMF1P40037 129 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C HXT8P40886 569 aa8.29□□□□□ -1.08
SNP1YIL061C NET1P47035 1189 aa8.29□□□□□ -1.08
SNP1YIL061C BTN2P53286 410 aa8.29□□□□□ -1.08
SNP1YIL061C ESBP6P53918 673 aa8.29□□□□□ -1.08
SNP1YIL061C RRB1Q04225 511 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C CSR1Q06705 408 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C TYW1Q08960 810 aaKnown RBP8.29□□□□□ -1.08
SNP1YIL061C OSH2Q12451 1283 aa8.29□□□□□ -1.08
SNP1YIL061C TRP2P00899 507 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C VMA2P16140 517 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C DBP5P20449 482 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C TKL1P23254 680 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C HUL5P53119 910 aa8.28□□□□□ -1.08
SNP1YIL061C YGR125WP53273 1036 aa8.28□□□□□ -1.08
SNP1YIL061C YAF9P53930 226 aa8.28□□□□□ -1.08
SNP1YIL061C TIM8P57744 87 aa8.28□□□□□ -1.08
SNP1YIL061C DON1Q05610 365 aa8.28□□□□□ -1.08
SNP1YIL061C ATG23Q06671 453 aa8.28□□□□□ -1.08
SNP1YIL061C TSR1Q07381 788 aaKnown RBP8.28□□□□□ -1.08
SNP1YIL061C ERP3Q12403 225 aa8.28□□□□□ -1.08
SNP1YIL061C RMP1Q12530 201 aa8.28□□□□□ -1.08
SNP1YIL061C CDC19P00549 500 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C SWI6P09959 803 aa8.27□□□□□ -1.09
SNP1YIL061C CHS2P14180 963 aa8.27□□□□□ -1.09
SNP1YIL061C SIS1P25294 352 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C PAP1P29468 568 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C NAM7P30771 971 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C CNS1P33313 385 aa8.27□□□□□ -1.09
SNP1YIL061C MCD4P36051 919 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms