RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C PLP2Q12017 286 aa9.29□□□□□ -0.92
SOD2YHR008C ADE4P04046 510 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C RPS14AP06367 137 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C MAK11P20484 414 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C VPH1P32563 840 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C ECM32P32644 1121 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C PEX2P32800 271 aa9.28□□□□□ -0.92
SOD2YHR008C RPT1P33299 467 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C HMT1P38074 348 aa9.28□□□□□ -0.92
SOD2YHR008C SFB3P38810 929 aa9.28□□□□□ -0.92
SOD2YHR008C NMD3P38861 518 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C RPS14BP39516 138 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C FIS1P40515 155 aa9.28□□□□□ -0.92
SOD2YHR008C ISM1P48526 1002 aa9.28□□□□□ -0.92
SOD2YHR008C BNI5P53890 448 aaKnown RBP9.28□□□□□ -0.92
SOD2YHR008C NSE5Q03718 556 aa9.28□□□□□ -0.92
SOD2YHR008C SDH5Q08230 162 aa9.28□□□□□ -0.92
SOD2YHR008C MET6P05694 767 aaKnown RBP9.27□□□□□ -0.93
SOD2YHR008C SCP160P06105 1222 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
SOD2YHR008C HAP2P06774 265 aa9.27□□□□□ -0.93
SOD2YHR008C CLN3P13365 580 aa9.27□□□□□ -0.93
SOD2YHR008C RAD54P32863 898 aa9.27□□□□□ -0.93
SOD2YHR008C TAM41P53230 385 aa9.27□□□□□ -0.93
SOD2YHR008C YGR130CP53278 816 aa9.27□□□□□ -0.93
SOD2YHR008C AIM33Q04516 312 aa9.27□□□□□ -0.93
SOD2YHR008C NKP2Q06162 153 aa9.27□□□□□ -0.93
SOD2YHR008C NCR1Q12200 1170 aa9.27□□□□□ -0.93
SOD2YHR008C BEM2P39960 2167 aaKnown RBP9.26□□□□□ -0.93
SOD2YHR008C FUS1P11710 512 aa9.26□□□□□ -0.93
SOD2YHR008C HCA4P20448 770 aaKnown RBP9.26□□□□□ -0.93
SOD2YHR008C PGS1P25578 521 aa9.26□□□□□ -0.93
SOD2YHR008C MRF1P30775 413 aaPredicted RBP9.26□□□□□ -0.93
SOD2YHR008C DPH2P32461 534 aa9.26□□□□□ -0.93
SOD2YHR008C SAS3P34218 831 aa9.26□□□□□ -0.93
SOD2YHR008C CIC1P38779 376 aaKnown RBP9.26□□□□□ -0.93
SOD2YHR008C LSB3P43603 459 aaKnown RBP9.26□□□□□ -0.93
SOD2YHR008C NUT1P53114 1132 aa9.26□□□□□ -0.93
SOD2YHR008C YGL081WP53156 320 aa9.26□□□□□ -0.93
SOD2YHR008C MFM1Q02783 413 aa9.26□□□□□ -0.93
SOD2YHR008C FPR4Q06205 392 aaPredicted RBP9.26□□□□□ -0.93
SOD2YHR008C ILV1P00927 576 aaKnown RBP9.25□□□□□ -0.93
SOD2YHR008C VAS1P07806 1104 aaKnown RBP9.25□□□□□ -0.93
SOD2YHR008C SUP45P12385 437 aaKnown RBP9.25□□□□□ -0.93
SOD2YHR008C PEX34P25584 144 aa9.25□□□□□ -0.93
SOD2YHR008C DIP5P53388 608 aa9.25□□□□□ -0.93
SOD2YHR008C MAS1P10507 462 aa9.24□□□□□ -0.93
SOD2YHR008C HEL1P36113 551 aa9.24□□□□□ -0.93
SOD2YHR008C MRX3P38172 270 aa9.24□□□□□ -0.93
SOD2YHR008C GAA1P39012 614 aa9.24□□□□□ -0.93
SOD2YHR008C YHM2Q04013 314 aa9.24□□□□□ -0.93
SOD2YHR008C SMD2Q06217 110 aaKnown RBP9.24□□□□□ -0.93
SOD2YHR008C DNL4Q08387 944 aaPredicted RBP9.24□□□□□ -0.93
SOD2YHR008C COX4P04037 155 aa9.23□□□□□ -0.93
SOD2YHR008C PRP22P24384 1145 aaKnown RBP9.23□□□□□ -0.93
SOD2YHR008C PCM1P38628 557 aaKnown RBP9.23□□□□□ -0.93
SOD2YHR008C NIS1P53939 407 aa9.23□□□□□ -0.93
SOD2YHR008C RCR2Q03446 210 aaKnown RBP9.23□□□□□ -0.93
SOD2YHR008C CSM3Q04659 317 aa9.23□□□□□ -0.93
SOD2YHR008C SPE3Q12074 293 aaKnown RBP9.23□□□□□ -0.93
SOD2YHR008C MCM3P24279 971 aaKnown RBP9.22□□□□□ -0.93
SOD2YHR008C FYV10P40492 516 aa9.22□□□□□ -0.93
SOD2YHR008C BRE2P43132 505 aa9.22□□□□□ -0.93
SOD2YHR008C RSM26P47141 266 aa9.22□□□□□ -0.93
SOD2YHR008C YGL138CP53122 345 aa9.22□□□□□ -0.93
SOD2YHR008C MNP1P53163 194 aaPredicted RBP9.22□□□□□ -0.93
SOD2YHR008C TPO2P53283 614 aa9.22□□□□□ -0.93
SOD2YHR008C GYL1Q04322 720 aa9.22□□□□□ -0.93
SOD2YHR008C YPR084WQ06821 456 aa9.22□□□□□ -0.93
SOD2YHR008C PDH1Q12428 516 aaKnown RBP9.22□□□□□ -0.93
SOD2YHR008C PGA3Q12746 312 aaKnown RBP9.22□□□□□ -0.93
SOD2YHR008C HXK1P04806 485 aaKnown RBP9.21□□□□□ -0.94
SOD2YHR008C PCK1P10963 549 aa9.21□□□□□ -0.94
SOD2YHR008C SKG6P32900 734 aaPredicted RBP9.21□□□□□ -0.94
SOD2YHR008C ATG19P35193 415 aa9.21□□□□□ -0.94
SOD2YHR008C ORC6P38826 435 aa9.21□□□□□ -0.94
SOD2YHR008C AKR1P39010 764 aa9.21□□□□□ -0.94
SOD2YHR008C RET3P53600 189 aa9.21□□□□□ -0.94
SOD2YHR008C YNR061CP53747 219 aa9.21□□□□□ -0.94
SOD2YHR008C FMP25Q08023 583 aa9.21□□□□□ -0.94
SOD2YHR008C MPD2Q99316 277 aa9.21□□□□□ -0.94
SOD2YHR008C TOM70P07213 617 aaKnown RBP9.2□□□□□ -0.94
SOD2YHR008C KGD2P19262 463 aaPredicted RBP9.2□□□□□ -0.94
SOD2YHR008C SIS2P36024 562 aa9.2□□□□□ -0.94
SOD2YHR008C POL12P38121 705 aaPredicted RBP9.2□□□□□ -0.94
SOD2YHR008C YER186CP40101 306 aa9.2□□□□□ -0.94
SOD2YHR008C PCI8P40512 444 aa9.2□□□□□ -0.94
SOD2YHR008C SLG1P54867 378 aa9.2□□□□□ -0.94
SOD2YHR008C EAF1Q06337 982 aa9.2□□□□□ -0.94
SOD2YHR008C NOC3Q07896 663 aaPredicted RBP9.2□□□□□ -0.94
SOD2YHR008C SRD1P09007 221 aa9.19□□□□□ -0.94
SOD2YHR008C TCP1P12612 559 aaKnown RBP9.19□□□□□ -0.94
SOD2YHR008C PDE1P22434 369 aa9.19□□□□□ -0.94
SOD2YHR008C MRM1P25270 412 aa9.19□□□□□ -0.94
SOD2YHR008C CYS3P31373 394 aaKnown RBP9.19□□□□□ -0.94
SOD2YHR008C MNR2P35724 969 aa9.19□□□□□ -0.94
SOD2YHR008C GYP8P43570 497 aa9.19□□□□□ -0.94
SOD2YHR008C DSE4P53753 1117 aa9.19□□□□□ -0.94
SOD2YHR008C YNL035CP53962 389 aaKnown RBP9.19□□□□□ -0.94
SOD2YHR008C ADA2Q02336 434 aa9.19□□□□□ -0.94
SOD2YHR008C EEB1Q02891 456 aa9.19□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms