RNA–Protein interactions for RNA: YGR059W

SPR3, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR3, Length 1,539 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR3	YGR059W	UBA2	P52488	636 aa		4.97	□□□□□ -1.61
SPR3	YGR059W	KAR4	P25583	335 aa		4.97	□□□□□ -1.61
SPR3	YGR059W	HEM3	P28789	327 aa		4.97	□□□□□ -1.61
SPR3	YGR059W	WHI4	Q07655	649 aa	Known RBP	4.97	□□□□□ -1.61
SPR3	YGR059W	YLR040C	Q07988	224 aa		4.97	□□□□□ -1.61
SPR3	YGR059W	MET10	P39692	1035 aa		4.96	□□□□□ -1.62
SPR3	YGR059W	NPP2	P39997	493 aa		4.96	□□□□□ -1.62
SPR3	YGR059W	YLR225C	Q05948	407 aa	Known RBP	4.96	□□□□□ -1.62
SPR3	YGR059W	YOL073C	Q08232	322 aa		4.96	□□□□□ -1.62
SPR3	YGR059W	ATG19	P35193	415 aa		4.95	□□□□□ -1.62
SPR3	YGR059W	GUP2	Q08929	609 aa		4.95	□□□□□ -1.62
SPR3	YGR059W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SPR3	YGR059W	PET112	P33893	541 aa		4.93	□□□□□ -1.62
SPR3	YGR059W	SUL1	P38359	859 aa		4.92	□□□□□ -1.62
SPR3	YGR059W	SAH1	P39954	449 aa	Known RBP	4.92	□□□□□ -1.62
SPR3	YGR059W	OYE2	Q03558	400 aa	Known RBP	4.92	□□□□□ -1.62
SPR3	YGR059W	SPO20	Q04359	397 aa		4.92	□□□□□ -1.62
SPR3	YGR059W	KTR4	P38131	464 aa		4.92	□□□□□ -1.62
SPR3	YGR059W	SFB2	P53953	876 aa		4.92	□□□□□ -1.62
SPR3	YGR059W	TMN2	Q04562	672 aa		4.92	□□□□□ -1.62
SPR3	YGR059W	ESC2	Q06340	456 aa		4.92	□□□□□ -1.62
SPR3	YGR059W	UPC2	Q12151	913 aa		4.92	□□□□□ -1.62
SPR3	YGR059W	CAD1	P24813	409 aa	Known RBP	4.9	□□□□□ -1.63
SPR3	YGR059W	ERG4	P25340	473 aa		4.9	□□□□□ -1.63
SPR3	YGR059W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
SPR3	YGR059W	QRI1	P43123	477 aa	Known RBP	4.9	□□□□□ -1.63
SPR3	YGR059W	RPC82	P32349	654 aa		4.89	□□□□□ -1.63
SPR3	YGR059W	CDC12	P32468	407 aa	Known RBP	4.89	□□□□□ -1.63
SPR3	YGR059W	STE14	P32584	239 aa		4.89	□□□□□ -1.63
SPR3	YGR059W	MNR2	P35724	969 aa		4.89	□□□□□ -1.63
SPR3	YGR059W	SNF7	P39929	240 aa	Known RBP	4.89	□□□□□ -1.63
SPR3	YGR059W	STB4	P50104	949 aa		4.89	□□□□□ -1.63
SPR3	YGR059W	OMS1	Q06668	471 aa		4.89	□□□□□ -1.63
SPR3	YGR059W	MCH5	Q08777	521 aa		4.89	□□□□□ -1.63
SPR3	YGR059W	TRP4	P07285	380 aa	Predicted RBP	4.88	□□□□□ -1.63
SPR3	YGR059W	YGR053C	P53234	283 aa		4.88	□□□□□ -1.63
SPR3	YGR059W	STU2	P46675	888 aa		4.87	□□□□□ -1.63
SPR3	YGR059W	ABD1	P32783	436 aa	Predicted RBP	4.87	□□□□□ -1.63
SPR3	YGR059W	ATF1	P40353	525 aa		4.87	□□□□□ -1.63
SPR3	YGR059W	SLU7	Q02775	382 aa	Known RBP	4.87	□□□□□ -1.63
SPR3	YGR059W	SRP1	Q02821	542 aa	Known RBP	4.87	□□□□□ -1.63
SPR3	YGR059W	ASF1	P32447	279 aa		4.86	□□□□□ -1.63
SPR3	YGR059W	GYP7	P48365	746 aa		4.86	□□□□□ -1.63
SPR3	YGR059W	ACF2	Q12168	779 aa		4.86	□□□□□ -1.63
SPR3	YGR059W	SED4	P25365	1065 aa		4.85	□□□□□ -1.63
SPR3	YGR059W	MBP1	P39678	833 aa		4.85	□□□□□ -1.63
SPR3	YGR059W	FAA4	P47912	694 aa	Known RBP	4.85	□□□□□ -1.63
SPR3	YGR059W	RNT1	Q02555	471 aa		4.85	□□□□□ -1.63
SPR3	YGR059W	YMR206W	Q03695	313 aa		4.85	□□□□□ -1.63
SPR3	YGR059W	IRC10	Q08118	586 aa		4.85	□□□□□ -1.63
SPR3	YGR059W	TRM13	Q12383	476 aa		4.85	□□□□□ -1.63
SPR3	YGR059W	RAI1	P53063	387 aa	Known RBP	4.84	□□□□□ -1.63
SPR3	YGR059W	ERG5	P54781	538 aa		4.84	□□□□□ -1.63
SPR3	YGR059W	YER158C	P40095	573 aa		4.83	□□□□□ -1.64
SPR3	YGR059W	MUK1	Q02866	612 aa		4.83	□□□□□ -1.64
SPR3	YGR059W	DUS3	Q06053	668 aa	Known RBP	4.83	□□□□□ -1.64
SPR3	YGR059W	YPR196W	Q06595	470 aa		4.83	□□□□□ -1.64
SPR3	YGR059W	YKR078W	P36158	585 aa	Known RBP	4.82	□□□□□ -1.64
SPR3	YGR059W	TSL1	P38427	1098 aa	Known RBP	4.82	□□□□□ -1.64
SPR3	YGR059W	PPR1	P07272	904 aa	Predicted RBP	4.82	□□□□□ -1.64
SPR3	YGR059W	ALG7	P07286	448 aa		4.82	□□□□□ -1.64
SPR3	YGR059W	SBA1	P28707	216 aa	Known RBP	4.82	□□□□□ -1.64
SPR3	YGR059W	TIM44	Q01852	431 aa		4.82	□□□□□ -1.64
SPR3	YGR059W	BDF2	Q07442	638 aa		4.82	□□□□□ -1.64
SPR3	YGR059W	MTH1	P35198	433 aa		4.81	□□□□□ -1.64
SPR3	YGR059W	YBR238C	P38330	731 aa	Known RBP	4.81	□□□□□ -1.64
SPR3	YGR059W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
SPR3	YGR059W	GDE1	Q02979	1223 aa		4.81	□□□□□ -1.64
SPR3	YGR059W	AGP1	P25376	633 aa		4.8	□□□□□ -1.64
SPR3	YGR059W	YKE2	P52553	114 aa		4.8	□□□□□ -1.64
SPR3	YGR059W	GND2	P53319	492 aa		4.8	□□□□□ -1.64
SPR3	YGR059W	LGE1	Q02796	332 aa	Known RBP	4.8	□□□□□ -1.64
SPR3	YGR059W	NOT3	P06102	836 aa	Known RBP	4.79	□□□□□ -1.64
SPR3	YGR059W	CDC48	P25694	835 aa	Known RBP	4.79	□□□□□ -1.64
SPR3	YGR059W	SEC21	P32074	935 aa	Known RBP	4.79	□□□□□ -1.64
SPR3	YGR059W	CUE2	P36075	443 aa	Known RBP	4.79	□□□□□ -1.64
SPR3	YGR059W	SSL1	Q04673	461 aa	Predicted RBP	4.79	□□□□□ -1.64
SPR3	YGR059W	FBP1	P09201	348 aa		4.78	□□□□□ -1.64
SPR3	YGR059W	NPP1	P25353	742 aa		4.78	□□□□□ -1.64
SPR3	YGR059W	KRI1	P42846	591 aa	Known RBP	4.78	□□□□□ -1.64
SPR3	YGR059W	STE13	P33894	931 aa		4.77	□□□□□ -1.65
SPR3	YGR059W	SPC42	P36094	363 aa		4.77	□□□□□ -1.65
SPR3	YGR059W	PEX19	Q07418	342 aa		4.77	□□□□□ -1.65
SPR3	YGR059W	FAL1	Q12099	399 aa	Known RBP	4.77	□□□□□ -1.65
SPR3	YGR059W	AFR1	P33304	620 aa		4.77	□□□□□ -1.65
SPR3	YGR059W	VBA5	P36172	582 aa		4.76	□□□□□ -1.65
SPR3	YGR059W	SDP1	P40479	209 aa		4.76	□□□□□ -1.65
SPR3	YGR059W	YDR306C	Q06640	478 aa		4.76	□□□□□ -1.65
SPR3	YGR059W	CTF13	P35203	478 aa		4.75	□□□□□ -1.65
SPR3	YGR059W	FRE5	Q08908	694 aa		4.75	□□□□□ -1.65
SPR3	YGR059W	PPH3	P32345	308 aa		4.74	□□□□□ -1.65
SPR3	YGR059W	RPD3	P32561	433 aa		4.74	□□□□□ -1.65
SPR3	YGR059W	PPS1	P38148	807 aa		4.74	□□□□□ -1.65
SPR3	YGR059W	SDS3	P40505	327 aa		4.74	□□□□□ -1.65
SPR3	YGR059W	JIP5	Q06214	492 aa	Predicted RBP	4.74	□□□□□ -1.65
SPR3	YGR059W	TUB3	P09734	445 aa	Known RBP	4.73	□□□□□ -1.65
SPR3	YGR059W	SNM1	P40993	198 aa		4.73	□□□□□ -1.65
SPR3	YGR059W	VPS16	Q03308	798 aa		4.73	□□□□□ -1.65
SPR3	YGR059W	SHE9	Q04172	456 aa		4.73	□□□□□ -1.65
SPR3	YGR059W	HBT1	Q07653	1046 aa	Known RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms