RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID30	YGL227W	RRD2	Q12461	358 aa		5.73	□□□□□ -1.49
VID30	YGL227W	BI4	P03879	638 aa		5.72	□□□□□ -1.49
VID30	YGL227W	MATALPHA2	P0CY08	210 aa		5.72	□□□□□ -1.49
VID30	YGL227W	HMLALPHA2	P0CY09	210 aa		5.72	□□□□□ -1.49
VID30	YGL227W	PCK1	P10963	549 aa		5.72	□□□□□ -1.49
VID30	YGL227W	SGM1	P47166	707 aa		5.72	□□□□□ -1.49
VID30	YGL227W	RIT1	P23796	513 aa		5.72	□□□□□ -1.49
VID30	YGL227W	TMT1	P32643	299 aa		5.72	□□□□□ -1.49
VID30	YGL227W	PTC3	P34221	468 aa	Known RBP	5.72	□□□□□ -1.49
VID30	YGL227W	RDH54	P38086	958 aa		5.72	□□□□□ -1.49
VID30	YGL227W	PSP2	P50109	593 aa	Known RBP	5.72	□□□□□ -1.49
VID30	YGL227W	HPF1	Q05164	967 aa		5.72	□□□□□ -1.49
VID30	YGL227W	ATE1	P16639	503 aa		5.71	□□□□□ -1.5
VID30	YGL227W	FPR1	P20081	114 aa	Known RBP	5.71	□□□□□ -1.5
VID30	YGL227W	TAF1	P46677	1066 aa		5.71	□□□□□ -1.5
VID30	YGL227W	CSM3	Q04659	317 aa		5.71	□□□□□ -1.5
VID30	YGL227W	UTP4	Q06679	776 aa	Known RBP	5.71	□□□□□ -1.5
VID30	YGL227W	SGT2	Q12118	346 aa	Known RBP	5.71	□□□□□ -1.5
VID30	YGL227W	CSE1	P33307	960 aa		5.71	□□□□□ -1.5
VID30	YGL227W	VID30	P53076	958 aa		5.71	□□□□□ -1.5
VID30	YGL227W	YNL134C	P53912	376 aa	Known RBP	5.71	□□□□□ -1.5
VID30	YGL227W	MFB1	Q04922	465 aa		5.71	□□□□□ -1.5
VID30	YGL227W	TFC6	Q06339	672 aa		5.71	□□□□□ -1.5
VID30	YGL227W	RIM20	Q12033	661 aa		5.71	□□□□□ -1.5
VID30	YGL227W	MTF1	P14908	341 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	MPE1	P35728	441 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	AAP1	P37898	856 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	VPS25	P47142	202 aa		5.7	□□□□□ -1.5
VID30	YGL227W	GCV2	P49095	1034 aa		5.7	□□□□□ -1.5
VID30	YGL227W	ORC4	P54791	529 aa		5.7	□□□□□ -1.5
VID30	YGL227W	DOT1	Q04089	582 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	KEX1	P09620	729 aa		5.7	□□□□□ -1.5
VID30	YGL227W	HOM2	P13663	365 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	RFT1	P38206	574 aa	Predicted RBP	5.7	□□□□□ -1.5
VID30	YGL227W	FMP10	P40098	244 aa		5.7	□□□□□ -1.5
VID30	YGL227W	RPL34B	P40525	121 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	YNL035C	P53962	389 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	PUS1	Q12211	544 aa	Known RBP	5.7	□□□□□ -1.5
VID30	YGL227W	ALG1	P16661	449 aa		5.69	□□□□□ -1.5
VID30	YGL227W	PGS1	P25578	521 aa		5.69	□□□□□ -1.5
VID30	YGL227W	SRD1	P09007	221 aa		5.69	□□□□□ -1.5
VID30	YGL227W	SEC21	P32074	935 aa	Known RBP	5.69	□□□□□ -1.5
VID30	YGL227W	TOM20	P35180	183 aa		5.69	□□□□□ -1.5
VID30	YGL227W	DAS1	P47005	663 aa		5.69	□□□□□ -1.5
VID30	YGL227W	UBP15	P50101	1230 aa		5.69	□□□□□ -1.5
VID30	YGL227W	RPL34A	P87262	121 aa	Predicted RBP	5.69	□□□□□ -1.5
VID30	YGL227W	YML083C	Q04526	418 aa		5.69	□□□□□ -1.5
VID30	YGL227W	RPL40A	P0CH08	128 aa	Known RBP	5.69	□□□□□ -1.5
VID30	YGL227W	RPL40B	P0CH09	128 aa	Known RBP	5.69	□□□□□ -1.5
VID30	YGL227W	SAM1	P10659	382 aa	Known RBP	5.69	□□□□□ -1.5
VID30	YGL227W	PEX28	P38848	579 aa		5.69	□□□□□ -1.5
VID30	YGL227W	LAM5	P43560	674 aa		5.69	□□□□□ -1.5
VID30	YGL227W	IML2	P47031	731 aa		5.69	□□□□□ -1.5
VID30	YGL227W	HIS5	P07172	385 aa		5.68	□□□□□ -1.5
VID30	YGL227W	APE1	P14904	514 aa		5.68	□□□□□ -1.5
VID30	YGL227W	SAM2	P19358	384 aa	Known RBP	5.68	□□□□□ -1.5
VID30	YGL227W	PRS1	P32895	427 aa	Known RBP	5.68	□□□□□ -1.5
VID30	YGL227W	FLR1	P38124	548 aa		5.68	□□□□□ -1.5
VID30	YGL227W	UBX7	P38349	436 aa		5.68	□□□□□ -1.5
VID30	YGL227W	DAK2	P43550	591 aa		5.68	□□□□□ -1.5
VID30	YGL227W	INP52	P50942	1183 aa		5.68	□□□□□ -1.5
VID30	YGL227W	CET1	O13297	549 aa	Predicted RBP	5.68	□□□□□ -1.5
VID30	YGL227W	WHI2	P12611	486 aa		5.68	□□□□□ -1.5
VID30	YGL227W	YLR407W	Q06070	228 aa		5.68	□□□□□ -1.5
VID30	YGL227W	NAT1	P12945	854 aa	Known RBP	5.67	□□□□□ -1.5
VID30	YGL227W	BET2	P20133	325 aa		5.67	□□□□□ -1.5
VID30	YGL227W	DON1	Q05610	365 aa		5.67	□□□□□ -1.5
VID30	YGL227W	GIS3	Q12418	502 aa		5.67	□□□□□ -1.5
VID30	YGL227W	PBS2	P08018	668 aa		5.67	□□□□□ -1.5
VID30	YGL227W	YKL151C	P36059	337 aa		5.67	□□□□□ -1.5
VID30	YGL227W	PCF11	P39081	626 aa	Predicted RBP	5.67	□□□□□ -1.5
VID30	YGL227W	RNH70	P53331	553 aa		5.67	□□□□□ -1.5
VID30	YGL227W	GIR2	Q03768	265 aa	Predicted RBP	5.67	□□□□□ -1.5
VID30	YGL227W	UTP14	Q04500	899 aa	Known RBP	5.67	□□□□□ -1.5
VID30	YGL227W	APL5	Q08951	932 aa	Known RBP	5.67	□□□□□ -1.5
VID30	YGL227W	PGI1	P12709	554 aa	Known RBP	5.66	□□□□□ -1.5
VID30	YGL227W	KRS1	P15180	591 aa	Known RBP	5.66	□□□□□ -1.5
VID30	YGL227W	RAD27	P26793	382 aa		5.66	□□□□□ -1.5
VID30	YGL227W	HEM3	P28789	327 aa		5.66	□□□□□ -1.5
VID30	YGL227W	CDC27	P38042	758 aa		5.66	□□□□□ -1.5
VID30	YGL227W	GAA1	P39012	614 aa		5.66	□□□□□ -1.5
VID30	YGL227W	NPP2	P39997	493 aa		5.66	□□□□□ -1.5
VID30	YGL227W	BIM1	P40013	344 aa		5.66	□□□□□ -1.5
VID30	YGL227W	FAF1	P40546	346 aa	Predicted RBP	5.66	□□□□□ -1.5
VID30	YGL227W	FYV8	P46949	817 aa	Known RBP	5.66	□□□□□ -1.5
VID30	YGL227W	CUL3	P53202	744 aa		5.66	□□□□□ -1.5
VID30	YGL227W	CIT1	P00890	479 aa		5.66	□□□□□ -1.5
VID30	YGL227W	CIT2	P08679	460 aa		5.66	□□□□□ -1.5
VID30	YGL227W	TRM2	P33753	639 aa		5.66	□□□□□ -1.5
VID30	YGL227W	UBP11	P36026	717 aa		5.66	□□□□□ -1.5
VID30	YGL227W	FIG4	P42837	879 aa		5.66	□□□□□ -1.5
VID30	YGL227W	NSE5	Q03718	556 aa		5.66	□□□□□ -1.5
VID30	YGL227W	ARP6	Q12509	438 aa		5.66	□□□□□ -1.5
VID30	YGL227W	KEX2	P13134	814 aa		5.65	□□□□□ -1.5
VID30	YGL227W	THR4	P16120	514 aa	Known RBP	5.65	□□□□□ -1.5
VID30	YGL227W	RFS1	P38234	210 aa	Known RBP	5.65	□□□□□ -1.5
VID30	YGL227W	CTM1	P38818	585 aa		5.65	□□□□□ -1.5
VID30	YGL227W	RSC1	P53236	928 aa		5.65	□□□□□ -1.5
VID30	YGL227W	STB3	Q12427	513 aa		5.65	□□□□□ -1.5
VID30	YGL227W	HCA4	P20448	770 aa	Known RBP	5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 76 ms